Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060282.seq
(678 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5J1 Cluster: 26S proteasome non-ATPase regulatory su... 172 6e-42
UniRef50_UPI00015B4210 Cluster: PREDICTED: similar to 26S protea... 108 1e-22
UniRef50_Q9UNM6 Cluster: 26S proteasome non-ATPase regulatory su... 97 5e-19
UniRef50_Q10Q05 Cluster: PCI domain containing protein, expresse... 89 1e-16
UniRef50_Q7KMP8 Cluster: 26S proteasome regulatory complex subun... 87 5e-16
UniRef50_Q8RWF0 Cluster: 26S proteasome subunit-like protein; n=... 77 3e-13
UniRef50_Q86EV4 Cluster: Clone ZZD1379 mRNA sequence; n=3; Bilat... 72 1e-11
UniRef50_UPI0001555322 Cluster: PREDICTED: similar to 26S protea... 67 4e-10
UniRef50_Q22253 Cluster: Putative uncharacterized protein rpn-9;... 64 4e-09
UniRef50_Q5KLK2 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_Q4PBL8 Cluster: Putative uncharacterized protein; n=1; ... 56 6e-07
UniRef50_Q54NQ0 Cluster: 26S proteasome non-ATPase regulatory su... 55 1e-06
UniRef50_Q23RE5 Cluster: PCI domain containing protein; n=1; Tet... 54 4e-06
UniRef50_Q6BZE7 Cluster: Debaryomyces hansenii chromosome A of s... 53 7e-06
UniRef50_Q04062 Cluster: 26S proteasome regulatory subunit RPN9;... 47 4e-04
UniRef50_Q9US13 Cluster: Probable 26S proteasome regulatory subu... 47 4e-04
UniRef50_Q5AD74 Cluster: Likely 26S proteasome regulatory partic... 45 0.001
UniRef50_Q4WLP7 Cluster: Proteasome regulatory particle subunit ... 45 0.001
UniRef50_A0DX64 Cluster: Chromosome undetermined scaffold_68, wh... 42 0.010
UniRef50_UPI0000498B22 Cluster: 26S proteasome regulatory subuni... 37 0.39
UniRef50_A3ZSR8 Cluster: DEAD/DEAH box helicase, N-terminal; n=1... 36 0.91
UniRef50_UPI0000499F78 Cluster: conserved hypothetical protein; ... 36 1.2
UniRef50_Q11RA7 Cluster: Cation efflux protein; n=2; Sphingobact... 34 2.8
UniRef50_A2E0X2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_Q8IK59 Cluster: Putative uncharacterized protein; n=4; ... 34 3.7
UniRef50_UPI0000660B3F Cluster: Rho guanine nucleotide exchange ... 33 6.4
UniRef50_Q1Q2S0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_A4SAU9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 6.4
UniRef50_Q757B6 Cluster: Diphthamide biosynthesis protein 2; n=1... 33 6.4
UniRef50_UPI0000E7FB3F Cluster: PREDICTED: hypothetical protein;... 33 8.4
UniRef50_Q4T952 Cluster: Chromosome undetermined SCAF7638, whole... 33 8.4
UniRef50_Q47ZW4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q0TQM9 Cluster: OB-fold nucleic acid binding domain pro... 33 8.4
UniRef50_Q8IJA0 Cluster: 26S proteasome subunit, putative; n=7; ... 33 8.4
UniRef50_Q0U3I1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q9UI12 Cluster: Vacuolar ATP synthase subunit H; n=43; ... 33 8.4
>UniRef50_Q2F5J1 Cluster: 26S proteasome non-ATPase regulatory
subunit 13; n=3; Coelomata|Rep: 26S proteasome
non-ATPase regulatory subunit 13 - Bombyx mori (Silk
moth)
Length = 385
Score = 172 bits (419), Expect = 6e-42
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +1
Query: 10 ATVKFAVIDVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGD 189
ATVKFAVIDVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGD
Sbjct: 2 ATVKFAVIDVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGD 61
Query: 190 NLIQLYNNFLTTFESKINPLSLL 258
NLIQLYNNFLTTFESKINPLSL+
Sbjct: 62 NLIQLYNNFLTTFESKINPLSLV 84
Score = 134 bits (325), Expect = 1e-30
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 252 IVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKI 431
+VEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKI
Sbjct: 83 LVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKI 142
Query: 432 IEHLES 449
IEHLES
Sbjct: 143 IEHLES 148
Score = 79.0 bits (186), Expect = 1e-13
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +2
Query: 449 SLEDADGVTPVHGRFYKLASNITESVVPL-PYYRAALRYVGCADGGEAYLPLNVLISXSD 625
+LEDADGVTPVHGRFYKLAS P YYRAALRYVGCADGGEA LP +
Sbjct: 149 TLEDADGVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVGCADGGEA-LPATERADIAF 207
Query: 626 *LSLECWL-PDXYEFG 670
L+L L PD Y+ G
Sbjct: 208 RLALSGVLAPDVYDLG 223
>UniRef50_UPI00015B4210 Cluster: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 13; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 13 - Nasonia
vitripennis
Length = 311
Score = 108 bits (260), Expect = 1e-22
Identities = 50/79 (63%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = +1
Query: 34 DVSDFLTKKQAS-EPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYN 210
DVS +L +K+ + + A+A +W+KL+ELY KKLWHQLTLKL+ FV +PALQ+ +NL+ LYN
Sbjct: 9 DVSAYLLQKRNNPDRAIAEEWSKLDELYQKKLWHQLTLKLETFVLHPALQKDENLVDLYN 68
Query: 211 NFLTTFESKINPLSLLRSL 267
NFL+TFESKINPLSL+ L
Sbjct: 69 NFLSTFESKINPLSLVEIL 87
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/66 (56%), Positives = 52/66 (78%)
Frame = +3
Query: 252 IVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKI 431
+VEI+AH+++Q+ +KR A+ FLEK E KVK + EA+ALCKVL GQI +++LN D +KI
Sbjct: 83 LVEILAHVIKQFKDKRGAINFLEKTEPKVKSSKEAVALCKVLAGQILLDELNIQDETKKI 142
Query: 432 IEHLES 449
IE +ES
Sbjct: 143 IEDVES 148
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 452 LEDADGVTPVHGRFYKLASNITE-SVVPLPYYRAALRYVGCAD 577
LE +DG+T VHGRFY LAS + YYR ALRY+GC D
Sbjct: 150 LETSDGITSVHGRFYLLASRLYRLQGKHADYYRTALRYLGCID 192
>UniRef50_Q9UNM6 Cluster: 26S proteasome non-ATPase regulatory
subunit 13; n=30; Eumetazoa|Rep: 26S proteasome
non-ATPase regulatory subunit 13 - Homo sapiens (Human)
Length = 376
Score = 96.7 bits (230), Expect = 5e-19
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +1
Query: 34 DVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 213
DV FL + Q+S P A W +LEELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 214 FLTTFESKINPLSLLRSLL 270
F++ FE ++NPLSL+ +L
Sbjct: 63 FISEFEHRVNPLSLVEIIL 81
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +3
Query: 252 IVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKI 431
+VEII H+V Q + A+TFLEK KVK +DEA+ LCK G + + + D ++
Sbjct: 76 LVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKL-NIGDLQVTKET 134
Query: 432 IEHLE 446
IE +E
Sbjct: 135 IEDVE 139
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 452 LEDADGVTPVHGRFYKLASNITESV-VPLPYYRAALRYVGCAD 577
L + GVT VH RFY L+S +++ YY+ ALR++GC D
Sbjct: 142 LNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVD 184
>UniRef50_Q10Q05 Cluster: PCI domain containing protein, expressed;
n=8; Oryza sativa|Rep: PCI domain containing protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 385
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +1
Query: 46 FLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTT 225
F+ ++ + P LA +A L +LY +KLWHQLTLKL F++ PA Q GD LIQLYNNF+T
Sbjct: 5 FVESQREARPELADPYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTLIQLYNNFITD 64
Query: 226 FESKINPLSLLRSLLIS 276
FE+KIN L L +I+
Sbjct: 65 FETKINLLKLAHFAVIA 81
>UniRef50_Q7KMP8 Cluster: 26S proteasome regulatory complex subunit
p39A; n=6; Diptera|Rep: 26S proteasome regulatory
complex subunit p39A - Drosophila melanogaster (Fruit
fly)
Length = 382
Score = 86.6 bits (205), Expect = 5e-16
Identities = 38/72 (52%), Positives = 55/72 (76%)
Frame = +1
Query: 52 TKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFE 231
T+K+ + LAA+W +EELYN+KLW++LT+KL FV++ +LQ L+QLY NFL+TFE
Sbjct: 14 TQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFE 73
Query: 232 SKINPLSLLRSL 267
+KINP L++ L
Sbjct: 74 TKINPYGLIQIL 85
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/64 (42%), Positives = 47/64 (73%)
Frame = +3
Query: 252 IVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKI 431
+++I+ +V+ +K++A+ FLEK++ KVK+ DEA+ +V+QG +Y+ LND +A +KI
Sbjct: 81 LIQILEVVVDNIGDKKEAIEFLEKMKDKVKICDEAVWYLQVMQGNLYLSNLNDLNATKKI 140
Query: 432 IEHL 443
IE L
Sbjct: 141 IEEL 144
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 443 RKSLEDADGVTPVHGRFYKLASNITESV-VPLPYYRAALRYVGCA 574
R LE+A VTPVHG++Y LAS V YYR L+++GC+
Sbjct: 145 RDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCGLQFLGCS 189
>UniRef50_Q8RWF0 Cluster: 26S proteasome subunit-like protein; n=7;
core eudicotyledons|Rep: 26S proteasome subunit-like
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 386
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +1
Query: 46 FLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTT 225
+L + + P L + L +LY KKLWHQLTLKL++F+ Q GD LIQ Y+NF+T
Sbjct: 6 YLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYHNFITD 65
Query: 226 FESKINPLSLLRSLLISWNSMSTRE 300
FE+KIN L L ++ S +E
Sbjct: 66 FETKINLLKLAHFAVVVSRQYSEKE 90
>UniRef50_Q86EV4 Cluster: Clone ZZD1379 mRNA sequence; n=3;
Bilateria|Rep: Clone ZZD1379 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +1
Query: 25 AVIDVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQL 204
A + V D+L + + DW ++ + + KKLWHQLTLKL+ +KNP + +LI L
Sbjct: 6 ASLTVRDYLNDRICEAGSFQDDWTQVSDFHTKKLWHQLTLKLESLLKNPEFRSKTDLILL 65
Query: 205 YNNFLTTFESKINPLSL 255
N FL F KINPLSL
Sbjct: 66 SNKFLGDFIYKINPLSL 82
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 437 TFRKSLEDADGVTPVHGRFYKLASNITESV-VPLPYYRAALRYVGCAD 577
T L++ +GVT VH RFY+L+S + + +Y+ ALR++GC D
Sbjct: 147 TTESQLDEIEGVTTVHSRFYQLSSRYYQIMGQHTQFYQEALRFLGCVD 194
Score = 40.3 bits (90), Expect = 0.042
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 252 IVEIIAHIVEQYV--NKRDAVTFLEKVETK-VKMNDEALALCKVLQGQIYIEQLNDYDAA 422
+ E+ I EQYV + R + FLE+V + + EA L G IY+ LND +A
Sbjct: 82 LAELCVPISEQYVITDPRQGIKFLEEVRDEFTSKSKEAKILFNTTIGMIYLTALNDLPSA 141
Query: 423 EKIIEHLES 449
++IE ES
Sbjct: 142 RQVIETTES 150
>UniRef50_UPI0001555322 Cluster: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 13 (26S
proteasome regulatory subunit S11) (26S proteasome
regulatory subunit p40.5), partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to 26S proteasome
non-ATPase regulatory subunit 13 (26S proteasome
regulatory subunit S11) (26S proteasome regulatory
subunit p40.5), partial - Ornithorhynchus anatinus
Length = 285
Score = 66.9 bits (156), Expect = 4e-10
Identities = 26/50 (52%), Positives = 41/50 (82%)
Frame = +1
Query: 121 KLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLLRSLL 270
+LWHQLTL++ +FV++P +GD LI+LY+NF++ FE ++NPLSL+ +L
Sbjct: 6 QLWHQLTLQVLDFVQDPCFAKGDGLIKLYDNFISEFEHRVNPLSLVEIIL 55
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +3
Query: 252 IVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQI 389
+VEII H+V Q + A+TFLEK KVK +DEA+ LCK G +
Sbjct: 50 LVEIILHVVRQMTDPSVALTFLEKTREKVKSSDEAVILCKTAIGAL 95
>UniRef50_Q22253 Cluster: Putative uncharacterized protein rpn-9;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rpn-9 - Caenorhabditis elegans
Length = 387
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 43 DFLTKK-QASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFL 219
D+L K A+ LA DW L+EL+ KKLWHQLT+ + VK P ++ + Y F+
Sbjct: 5 DYLNGKLAAANGPLADDWKNLKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEFYRLFV 64
Query: 220 TTFESKINPLSLLRSLLISWNSMSTRE 300
+E ++NPL L+ + +++T++
Sbjct: 65 AEWELRVNPLQLVEICISIAQNIATKD 91
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 467 GVTPVHGRFYKLASNITESVVPLP-YYRAALRYVGCAD 577
GVT VH FY+++S V YYR ALRY+G D
Sbjct: 156 GVTEVHAPFYRVSSLYLREVGDFAGYYREALRYLGVED 193
>UniRef50_Q5KLK2 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 412
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 FLTKKQASEPA-LAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLT 222
+L + AS P L W K+++ Y +KLWH LT+ L +FV P G I+L+ F+T
Sbjct: 16 YLDSQLASAPEELKPWWTKIKDQYERKLWHNLTVTLTQFVFLPG--TGQYQIELFEKFIT 73
Query: 223 TFESKINPLSLL 258
T ESKIN L L+
Sbjct: 74 TVESKINALKLV 85
>UniRef50_Q4PBL8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 395
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 ASEPA-LAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKI 240
+S PA L + KL++L+++KLW+QLTL ++EF+ +P Q I+LY++F+ F KI
Sbjct: 24 SSTPASLKPFYPKLQQLHDRKLWYQLTLIIEEFLNHPDSQAPPIQIELYDHFVRRFSPKI 83
Query: 241 NPLSL 255
N L L
Sbjct: 84 NQLQL 88
>UniRef50_Q54NQ0 Cluster: 26S proteasome non-ATPase regulatory
subunit 13; n=1; Dictyostelium discoideum AX4|Rep: 26S
proteasome non-ATPase regulatory subunit 13 -
Dictyostelium discoideum AX4
Length = 385
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +1
Query: 43 DFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLT 222
++L + P L+ +++ Y KLWHQLT +++ + +P L L Y NF+
Sbjct: 8 EYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFIR 67
Query: 223 TFESKINPLSLLRSLLISWNSMSTRE 300
FE+K+ PLSL+ + T E
Sbjct: 68 DFENKLRPLSLVEICIAVARQFDTDE 93
>UniRef50_Q23RE5 Cluster: PCI domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: PCI domain containing
protein - Tetrahymena thermophila SB210
Length = 378
Score = 53.6 bits (123), Expect = 4e-06
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 40 SDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNP-ALQRGDNLIQLYNNF 216
SD L + QA P +L LY +KLWH++TL L +++ LQ L++LY+ F
Sbjct: 3 SDLLQQLQAQFPQQQTILEQLALLYTQKLWHEITLNLNILLQDENVLQERKALLKLYDGF 62
Query: 217 LTTFESKINPLSLLRSLLISWNSMSTRE 300
+ F +K++ L L R L N+ T E
Sbjct: 63 VKKFINKLDQLLLARFLTFVANAFDTNE 90
>UniRef50_Q6BZE7 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 405
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +1
Query: 97 KLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLLRSLLIS 276
+LE+ + +KL+HQLTL L EF +NP + I++Y+ F++ F K+N + ++ LL S
Sbjct: 32 QLEDYFERKLYHQLTLTLNEFYENPESKNNRLRIKIYDLFISQFSQKLNSIQVVDFLLAS 91
Query: 277 W 279
+
Sbjct: 92 F 92
>UniRef50_Q04062 Cluster: 26S proteasome regulatory subunit RPN9;
n=6; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN9 - Saccharomyces cerevisiae (Baker's yeast)
Length = 393
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/75 (33%), Positives = 45/75 (60%)
Frame = +1
Query: 52 TKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFE 231
T + ++P+L + + E+ Y +KLW QL+ L +F + + ++LY+NF++ F
Sbjct: 13 TLRMEADPSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDA--KSTPLRLRLYDNFVSKFY 70
Query: 232 SKINPLSLLRSLLIS 276
KIN LS+++ LL S
Sbjct: 71 DKINQLSVVKYLLAS 85
>UniRef50_Q9US13 Cluster: Probable 26S proteasome regulatory subunit
rpn9; n=1; Schizosaccharomyces pombe|Rep: Probable 26S
proteasome regulatory subunit rpn9 - Schizosaccharomyces
pombe (Fission yeast)
Length = 381
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 31 IDVSDFLTKKQASEP-ALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLY 207
+++SDFL + P +L + +E+LY +KLW QLT L F P + + LY
Sbjct: 7 VNMSDFLHDQATRAPESLQQSYILMEDLYERKLWKQLTDALIVFFDTP--ETVPLRLPLY 64
Query: 208 NNFLTTFESKINPLSLLRSLLISWNSMSTRE 300
NF+ +F IN L + L ++ S S E
Sbjct: 65 TNFVNSFRPNINQLKAVYMGLKAFESCSNDE 95
>UniRef50_Q5AD74 Cluster: Likely 26S proteasome regulatory particle
subunit Rpn9p; n=2; Saccharomycetales|Rep: Likely 26S
proteasome regulatory particle subunit Rpn9p - Candida
albicans (Yeast)
Length = 416
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 97 KLEELYNKKLWHQLTLKLQE--FVKNPALQRGDNLIQLYNNFLTTFESKINPLSLLRSLL 270
+LE+ Y +KLWHQLT L + + + + + +LYN F+ F+ K+NP+ ++ LL
Sbjct: 32 QLEDFYERKLWHQLTQVLDQIYYTLDSTIITSNLKNRLYNLFIKQFQLKLNPIKVVDYLL 91
Query: 271 ISWNS 285
S+ +
Sbjct: 92 ESFEN 96
>UniRef50_Q4WLP7 Cluster: Proteasome regulatory particle subunit
(RpnI), putative; n=18; Ascomycota|Rep: Proteasome
regulatory particle subunit (RpnI), putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 405
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 37 VSDFLTKKQASEPALA-ADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNN 213
+SDFL + P + A + E+ + +KLWHQLT L EF + P + + ++
Sbjct: 30 ISDFLADQLQQAPEQSQAFFLSFEDFWERKLWHQLTNALVEFFQLP--ESAPQRLPIFKT 87
Query: 214 FLTTFESKINPLSLL 258
F+ +F KIN L +
Sbjct: 88 FVLSFADKINQLKFV 102
>UniRef50_A0DX64 Cluster: Chromosome undetermined scaffold_68, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_68,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 368
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +1
Query: 49 LTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTF 228
L + Q+ P L + + KLW QL+ +L ++K+P + +G +L L+ F+ F
Sbjct: 4 LNQHQSVFPHLLTIIDSMRVYHESKLWKQLSDQLLIYIKDPQVNQGTHLKDLFEGFVKKF 63
Query: 229 ESKINPLSLLRSLL 270
+I+ + L+R L+
Sbjct: 64 YQEIDEMKLVRFLI 77
>UniRef50_UPI0000498B22 Cluster: 26S proteasome regulatory subunit;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 26S proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 377
Score = 37.1 bits (82), Expect = 0.39
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 100 LEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLLRSLL 270
L+E KKL+ QLT + ++FV + LQ + Y F+ + KINP+ L + ++
Sbjct: 23 LQEEKEKKLYFQLTEESEKFVNDRFLQTIGVISDFYELFIRDIQKKINPIKLTQIVI 79
>UniRef50_A3ZSR8 Cluster: DEAD/DEAH box helicase, N-terminal; n=1;
Blastopirellula marina DSM 3645|Rep: DEAD/DEAH box
helicase, N-terminal - Blastopirellula marina DSM 3645
Length = 1001
Score = 35.9 bits (79), Expect = 0.91
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 40 SDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFL 219
S + K+ A +PA A W + + +N+ + Q ++ +++ A QRGD L L+ + L
Sbjct: 131 SKLIEKEAARDPAEARIWIRDLQKHNRDYYDQRLSAYRKEIRDEASQRGDTLDMLHRSSL 190
Query: 220 TTFE 231
T +
Sbjct: 191 ATLD 194
>UniRef50_UPI0000499F78 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 569
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 19 KFAVIDVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQE--FVKNPALQRGDN 192
K+A ID +++ +K+ E D L ++L HQ + Q F+K L++ +
Sbjct: 464 KYASIDRTEY--EKEFKEATKLGDQLALLNKEIEELNHQRVQQEQRLNFIKEKTLEKNNR 521
Query: 193 LIQLYNNFLTTFESKI 240
LI++Y N++ +++KI
Sbjct: 522 LIEVYKNYIQEYQNKI 537
>UniRef50_Q11RA7 Cluster: Cation efflux protein; n=2;
Sphingobacteriales|Rep: Cation efflux protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 1050
Score = 34.3 bits (75), Expect = 2.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 73 PALAADWAKLEELYNKKLWHQLTLKLQEFV 162
P LA+ WAKLE L LW + +K +EF+
Sbjct: 483 PLLASRWAKLEVLSKDSLWGLINIKFEEFL 512
>UniRef50_A2E0X2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 861
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +3
Query: 225 LRKQNKSPIIVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQL 404
L + + SP + ++A + + N + + F+ K+E+ + D LC VL +Y E +
Sbjct: 165 LAESDPSPQWLRLLATVTKNESNMGEMLQFMPKIESILNDPDCFPGLCSVLTSALYFEFI 224
Query: 405 NDYDAAEKIIEHL 443
N + ++ +++L
Sbjct: 225 NISEQEKQFLQNL 237
>UniRef50_Q8IK59 Cluster: Putative uncharacterized protein; n=4;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1971
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 55 KKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQR 183
KK+ L +W E Y +K + +L + L+E VKNP LQR
Sbjct: 1316 KKEKWFIVLKENWKNEEHKYMRKAYLELLMSLREDVKNPLLQR 1358
>UniRef50_UPI0000660B3F Cluster: Rho guanine nucleotide exchange
factor (GEF) 10-like isoform 2; n=1; Takifugu
rubripes|Rep: Rho guanine nucleotide exchange factor
(GEF) 10-like isoform 2 - Takifugu rubripes
Length = 925
Score = 33.1 bits (72), Expect = 6.4
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 43 DFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNL-IQLYNNFL 219
DFL KKQAS P + + + + + Q L LQ+ ++N + GD L +QL L
Sbjct: 99 DFLKKKQASSPDRITLYGLMVKPIQR--FPQFILLLQDMLRNTPVGHGDRLPLQLALTEL 156
Query: 220 TTFESKIN 243
T K+N
Sbjct: 157 ETLAEKLN 164
>UniRef50_Q1Q2S0 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 362
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 270 HIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIY 392
HI+E+YV ++A F++ + ++ K+ DEA+ L +L G Y
Sbjct: 275 HILEEYVRTKEATDFVDSLWSENKVGDEAVPLYNLL-GNCY 314
>UniRef50_A4SAU9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 398
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 97 KLEELYNKKLWHQLTLKLQEFVKNPALQR----GDNLIQLYNNFLTTFESKINPL 249
++ +L KKLWH+LTL ++ V P R L +Y+ + E++ NPL
Sbjct: 33 EIGDLRTKKLWHELTLAIERAVAAPMNARVALLPGGLRGMYDGVVREAETRFNPL 87
>UniRef50_Q757B6 Cluster: Diphthamide biosynthesis protein 2; n=1;
Eremothecium gossypii|Rep: Diphthamide biosynthesis
protein 2 - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 582
Score = 33.1 bits (72), Expect = 6.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 396 EQLNDYDAAEKIIEHLESHSKMLMV*LQFTDDFI 497
E++ Y A E + +HL SH++ + LQF DD +
Sbjct: 48 ERIRSYYAIESLADHLNSHAEYRSITLQFPDDLL 81
>UniRef50_UPI0000E7FB3F Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 117
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 665 IHXHPEASTPERASLKXISARSVAGRPHPRRRTQRTEALRGSTAVG 528
+H A P A+ + ++AR A HP R RT G AVG
Sbjct: 39 LHTRRNAHQPPIAATRDVTARGGAALAHPERTRTRTRGASGRRAVG 84
>UniRef50_Q4T952 Cluster: Chromosome undetermined SCAF7638, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7638,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1105
Score = 32.7 bits (71), Expect = 8.4
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 43 DFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNL-IQLYNNFL 219
DFL KKQAS P + + + + + Q L LQ+ ++N GD L +QL L
Sbjct: 190 DFLKKKQASSPDRITLYGLMVKPIQR--FPQFILLLQDMLRNTPQHHGDRLPLQLALTEL 247
Query: 220 TTFESKIN 243
T K+N
Sbjct: 248 ETLAEKLN 255
>UniRef50_Q47ZW4 Cluster: Putative uncharacterized protein; n=1;
Colwellia psychrerythraea 34H|Rep: Putative
uncharacterized protein - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 488
Score = 32.7 bits (71), Expect = 8.4
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -2
Query: 302 ISLVDILFHDMSNDLNNDRG--FILLSKVVKKLLYNCM-RLSPL 180
+ VD++F D+ + +D G FIL SK++ LLY M RLS L
Sbjct: 353 LKYVDLVFLDVEIEFLDDHGKPFILASKILSNLLYGAMPRLSQL 396
>UniRef50_Q0TQM9 Cluster: OB-fold nucleic acid binding domain protein;
n=2; Clostridium perfringens|Rep: OB-fold nucleic acid
binding domain protein - Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A)
Length = 1710
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 276 VEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAE-KIIEHLESH 452
V +Y N LEK+ +++++ND+ +A +V +GQ + LN Y + ++E L
Sbjct: 1148 VGEYSNGAQLNPILEKINSELRVNDDQVADYEVNEGQQFRLMLNKYSSPNFNLVEGLGEE 1207
Query: 453 SK 458
K
Sbjct: 1208 DK 1209
>UniRef50_Q8IJA0 Cluster: 26S proteasome subunit, putative; n=7;
Plasmodium|Rep: 26S proteasome subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 393
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +1
Query: 88 DWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKI 240
D +++ KKL H+LTL++Q+FV N ++ D +L+ +L+ +K+
Sbjct: 33 DMEEIKNYKEKKLHHELTLEVQKFVNNKDVELIDK-FRLFYTYLSPLITKL 82
>UniRef50_Q0U3I1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 353
Score = 32.7 bits (71), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 473 TPVHGRFYKLASNITESVVPLPYYRAALRYVGCADGGEAYLPLNVLI 613
TP H RF +L + +S+ P+P + A VG A G ++ NV I
Sbjct: 154 TPGHPRFRRLCDALGKSLPPIPVLKHASLLVGSAILGAVWVTYNVFI 200
>UniRef50_Q9UI12 Cluster: Vacuolar ATP synthase subunit H; n=43;
Deuterostomia|Rep: Vacuolar ATP synthase subunit H -
Homo sapiens (Human)
Length = 483
Score = 32.7 bits (71), Expect = 8.4
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Frame = +3
Query: 219 DHLRKQNKSPIIVEIIAHIVEQYVNKRDAV---TFLEKVETKVKMNDEALAL--CKVLQG 383
+HLR+ N P++ +I+ V++ V + FLEK + + ALA+ CKVL+
Sbjct: 258 EHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQ 317
Query: 384 QIYIEQ--LNDYDAAEKI 431
+EQ +D D +E I
Sbjct: 318 LENLEQQKYDDEDISEDI 335
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,358,230
Number of Sequences: 1657284
Number of extensions: 12947667
Number of successful extensions: 38163
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38136
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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