Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060282.seq
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   2.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   6.2  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -2

Query: 239 ILLSKVVKKLLYNCMRLSPL 180
           ++ +++  KLL NC+R+SP+
Sbjct: 19  VIPAELTAKLLGNCVRVSPV 38


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 569 TQRTEALRGSTAVGPRTL*YSRLTYKIVRELESHHQHLRVT 447
           T  T A   +TA    T    + T +    L++HH HL+ T
Sbjct: 114 TTTTTATAAATATTTATGLIKQETLQRHHHLQNHHHHLQST 154


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 73  PALAADWAKLEELYNK 120
           P LAA+ AKLEE+  K
Sbjct: 287 PKLAANRAKLEEIAGK 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,223
Number of Sequences: 438
Number of extensions: 4229
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)