Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060281.seq
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.46 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   7.6  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 297 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 392
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 413 GQQREDDPDHVRNIQHARHVRRHPSRA 493
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 254 EKRYPDPQIPHRTRNRH 304
           +K  PD  +P RT NRH
Sbjct: 106 DKFDPDNFLPERTANRH 122


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 335 MPNLLHVIPVSDDSVFD 285
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 335 MPNLLHVIPVSDDSVFD 285
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 335 MPNLLHVIPVSDDSVFD 285
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 335 MPNLLHVIPVSDDSVFD 285
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 242 MRHREKRYPDPQ 277
           M H EK +P+P+
Sbjct: 92  MHHNEKYFPEPE 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,024
Number of Sequences: 336
Number of extensions: 2956
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)