Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060281.seq
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         218   1e-58
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         218   1e-58
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         218   1e-58
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          204   2e-54
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    25   1.8  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            24   3.1  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    24   3.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   4.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.2  
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    23   9.5  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   9.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  218 bits (532), Expect = 1e-58
 Identities = 113/154 (73%), Positives = 114/154 (74%)
 Frame = +3

Query: 72  MCDEEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GT 251
           MCDEEVAALVVDNGSGM KAGFA         P   G     G     G +         
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 252 EKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKM 431
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 432 TQIMFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
           TQIMFETFNT AMYVAIQAVLSLYA    TGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  218 bits (532), Expect = 1e-58
 Identities = 113/154 (73%), Positives = 114/154 (74%)
 Frame = +3

Query: 72  MCDEEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GT 251
           MCDEEVAALVVDNGSGM KAGFA         P   G     G     G +         
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 252 EKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKM 431
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 432 TQIMFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
           TQIMFETFNT AMYVAIQAVLSLYA    TGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  218 bits (532), Expect = 1e-58
 Identities = 113/154 (73%), Positives = 114/154 (74%)
 Frame = +3

Query: 72  MCDEEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GT 251
           MCDEEVAALVVDNGSGM KAGFA         P   G     G     G +         
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 252 EKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKM 431
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 432 TQIMFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
           TQIMFETFNT AMYVAIQAVLSLYA    TGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  204 bits (498), Expect = 2e-54
 Identities = 103/154 (66%), Positives = 110/154 (71%)
 Frame = +3

Query: 72  MCDEEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GT 251
           MCD++  ALVVDNGSGM KAGFA         P   G     G     G +         
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 252 EKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKM 431
            KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPK+NREKM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120

Query: 432 TQIMFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
           TQIMFETF   A+YVAIQAVLSLYA    TG+VL
Sbjct: 121 TQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVL 154


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 248 HREKRYPDPQIPHRTRNRH 304
           H E   PD  +P RT+NRH
Sbjct: 116 HPETFNPDNFLPERTQNRH 134


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 308 VSDDSVFDGVFEGQDTSFLCASSPT 234
           V DD VFD   +  + S  C S+PT
Sbjct: 222 VGDDRVFDNGVKYPEASCWCNSNPT 246


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 254 EKRYPDPQIPHRTRNRH 304
           EK YPD  +P  + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 404 QPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRV 508
           Q + QQ+EDD  H +  QH  H     + A +VRV
Sbjct: 641 QQEEQQQEDDHHHHQ--QHHHHHHAEVTTAGSVRV 673


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 180 GXAPPSGRDGRYGTEGLLCRR*GTEKRGILTLK 278
           G   P GRDG +G  GL  ++      G+  LK
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLK 376


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 65  IQDVRRRSCRVGSRQWLRYVXGXFRXEMMLLAPCSPRSW 181
           + +VRR  C    R+ LRYV G  + + + +  CS   W
Sbjct: 52  VSEVRR--CDEMERK-LRYVEGEVKKDSVQIPECSVDDW 87


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 466 PCTSPSKPCSRCTR 507
           PCT+P+    RC R
Sbjct: 29  PCTTPNGTAGRCVR 42


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 357 AAHCRRYDAKSSPCHPS 307
           +AH RR+D  SSP  P+
Sbjct: 170 SAHDRRFDDASSPAVPA 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,028
Number of Sequences: 2352
Number of extensions: 13619
Number of successful extensions: 57
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)