Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060281.seq
(580 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 200 5e-52
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 200 7e-52
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 200 7e-52
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 198 2e-51
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 197 4e-51
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 197 4e-51
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 192 1e-49
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 192 1e-49
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 192 1e-49
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 175 1e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 165 2e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 154 4e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 119 2e-27
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 91 4e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 7e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 4e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 64 6e-11
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 54 5e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 3e-05
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 1.7
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 1.7
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 29 3.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.0
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 3.9
At1g66180.1 68414.m07512 aspartyl protease family protein contai... 28 3.9
At5g45620.2 68418.m05607 26S proteasome regulatory subunit, puta... 27 9.0
At5g45620.1 68418.m05608 26S proteasome regulatory subunit, puta... 27 9.0
At4g19006.1 68417.m02801 26S proteasome regulatory subunit, puta... 27 9.0
At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutam... 27 9.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (488), Expect = 5e-52
Identities = 103/151 (68%), Positives = 109/151 (72%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
E++ LV DNG+GM KAGFA P G +G G + KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFNT AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (487), Expect = 7e-52
Identities = 103/151 (68%), Positives = 108/151 (71%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
E++ LV DNG+GM KAGFA P G +G G + KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFNT AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (487), Expect = 7e-52
Identities = 103/151 (68%), Positives = 108/151 (71%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
E++ LV DNG+GM KAGFA P G +G G + KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFNT AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 198 bits (483), Expect = 2e-51
Identities = 102/151 (67%), Positives = 108/151 (71%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
E++ LV DNG+GM KAGFA P G +G G + KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFN AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVL 155
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 197 bits (481), Expect = 4e-51
Identities = 101/151 (66%), Positives = 107/151 (70%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
E++ LV DNG+GM KAGFA P G +G G + KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFN AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVL 155
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 197 bits (481), Expect = 4e-51
Identities = 101/151 (66%), Positives = 107/151 (70%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
E++ LV DNG+GM KAGFA P G +G G + KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFN AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVL 155
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 192 bits (469), Expect = 1e-49
Identities = 97/151 (64%), Positives = 107/151 (70%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
+++ +V DNG+GM KAGFA P G G + KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFN+ AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVL 155
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 192 bits (469), Expect = 1e-49
Identities = 97/151 (64%), Positives = 107/151 (70%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
+++ +V DNG+GM KAGFA P G G + KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFN+ AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVL 155
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 192 bits (469), Expect = 1e-49
Identities = 97/151 (64%), Positives = 107/151 (70%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
+++ +V DNG+GM KAGFA P G G + KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFETFN+ AMYVAIQAVLSLYA TGIVL
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVL 155
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 175 bits (427), Expect = 1e-44
Identities = 88/151 (58%), Positives = 102/151 (67%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKR 260
+E A+V DNG+GM KAGFA P G G + +R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 440
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTE PLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 441 MFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
MFE+F +MY+ IQAVLSLY+ TGIVL
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVL 156
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 165 bits (401), Expect = 2e-41
Identities = 89/155 (57%), Positives = 101/155 (65%)
Frame = +3
Query: 96 LVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDGRYGTEGLLCRR*GTEKRGILTL 275
+V D G GM +AGFA P G RDG E + G R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRP----RDGLNPNESYVGEE-GHANRDILTL 58
Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETF 455
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTE P NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 456 NTXAMYVAIQAVLSLYAXVVPTGIVLGLRRRCFXT 560
+ AMYV++Q+VL LY+ TG+VL L R T
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 154 bits (374), Expect = 4e-38
Identities = 69/93 (74%), Positives = 80/93 (86%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMT 434
+ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTE PLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 435 QIMFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
QIMFETF +MY+ +QA LSL+A TG VL
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHASGRTTGTVL 110
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 119 bits (286), Expect = 2e-27
Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 96 LVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRDG--RYGTEGLLCRR*GTEKRGIL 269
+V DNG+G K GFA + P G + + ++ +E R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 270 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFE 449
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 450 TFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
+N +++ IQAVL+LYA + TG+V+
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVI 154
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 142 GDDAPRAVFPSIVGXP--RHQGVMVGMGQKDSYVGD 243
G++ P +VFP +VG P R++ ++ KD VG+
Sbjct: 22 GENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/78 (51%), Positives = 52/78 (66%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFET 452
L YPIEHG V +WD ME+ W +N LR PE+H LLTE PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 453 FNTXAMYVAIQAVLSLYA 506
FN +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.6 bits (190), Expect = 7e-16
Identities = 36/93 (38%), Positives = 58/93 (62%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMT 434
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 435 QIMFETFNTXAMYVAIQAVLSLYAXVVPTGIVL 533
++MFE + A+++A VL+ +A T +V+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVV 177
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +1
Query: 142 GDDAPRAVFPSIVG 183
G+DAP+AVFPS++G
Sbjct: 25 GEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEXPLNPKANREKMTQIMFETFN 458
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 459 TXAMYVAIQAVLSLYA 506
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 64.1 bits (149), Expect = 6e-11
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Frame = +3
Query: 81 EEVAALVVDNGSGMXKAGFARR*CSSRRVPLDRGXAPPSGRD---GRYGTE--------- 224
+EV+A+VVD GS KAG+A P G +G D TE
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 225 GLLCRR*GTE----KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 392
G G++ +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 393 EXPLNPKANREK 428
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 30.3 bits (65), Expect = 0.97
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +1
Query: 142 GDDAPRAVFPSIVG 183
G+DAP+AVFPS+VG
Sbjct: 25 GEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFET 452
++ PI+ G + N D +IW H F + L +AP +LLTE PL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 453 FNTXAMYVA-IQAVLSLY 503
F ++Y+A Q+++ LY
Sbjct: 121 FGFSSLYIAHPQSLVHLY 138
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETFN 458
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 459 TXAMYVAIQAVLS 497
A+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEXPL-------NPKANREKMTQIMFETF---NTXAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N A+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYAXVVPTGIVLGL 539
VL+LYA +GIV+ +
Sbjct: 241 VLALYAARRTSGIVVNI 257
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEXPL-------NPKANREKMTQIMFETF---NTXAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N A+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYAXVVPTGIVLGL 539
VL+LYA +GIV+ +
Sbjct: 241 VLALYAARRTSGIVVNI 257
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 359 CXPR-GTPSXAH*GSPQPQGQQREDDPDHVRN-IQHARHVRRHPSRALAVRVGRTNRYRA 532
C P+ T H GSP+ +G + EDD D + N +A+ + + ++R+ +
Sbjct: 80 CCPQCKTRFRRHRGSPRVEGDEDEDDVDDIENEFNYAQGANKARHQRHGEEFSSSSRHES 139
Query: 533 W-TPATVFSHTVA 568
P HTV+
Sbjct: 140 QPIPLLTHGHTVS 152
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 395 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 496
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At1g66180.1 68414.m07512 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease profile;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]
Length = 430
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVP 245
S+SS T+PCS + RIP F++P
Sbjct: 116 SLSSSFSTLPCSHPLCKPRIPDFTLP 141
>At5g45620.2 68418.m05607 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 350
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At5g45620.1 68418.m05608 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 386
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At4g19006.1 68417.m02801 26S proteasome regulatory subunit,
putative (RPN9) similar to 26S proteasome subunit p40.5
[Homo sapiens] gi|3618343|dbj|BAA33214
Length = 386
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSV 326
>At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutamine
phosphoribosylpyrophosphate amidotransferase /
phosphoribosyldiphosphate 5-amidotransferase identical
to amidophosphoribosyltransferase [Arabidopsis thaliana]
GI:469193; identical to cDNA
amidophosphoribosyltransferase GI:469192
Length = 566
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 325 FSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSVPYRPS 203
FS S L+T P + Y +PLF P L K P + PS
Sbjct: 7 FSSSLSLITKPNNSSYTNQPLPLFPKPFL--KPPHLSLLPS 45
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,868,465
Number of Sequences: 28952
Number of extensions: 268739
Number of successful extensions: 820
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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