Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060280.seq
(669 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457554-1|AAL68784.1| 269|Anopheles gambiae salivary gland 1-l... 29 0.10
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 26 1.2
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 26 1.2
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 26 1.2
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 26 1.2
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 26 1.2
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 26 1.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 5.0
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 6.6
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 6.6
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 8.7
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 8.7
>AF457554-1|AAL68784.1| 269|Anopheles gambiae salivary gland 1-like
3 protein protein.
Length = 269
Score = 29.5 bits (63), Expect = 0.10
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 408 MLAAQSVDRVLHQRQLPAHSLLHRAMLQVVIKRYYQT 518
ML + DRV QR L HS+L A L ++K YQT
Sbjct: 23 MLTSMESDRV--QRALVLHSMLVNASLAEMVKESYQT 57
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 25.8 bits (54), Expect = 1.2
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 189 YLWESWSGLASYLHGSIADSRPLTVPCCYHLLTEDSDVELFDVFQ 323
YL+ + L++YL+ +I R +T+ C+++LT S F +FQ
Sbjct: 25 YLFTQCNPLSTYLYRTILALRLVTLLPCFNVLTFIS--SFFSLFQ 67
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 493 TCSMARCSKLWAGSWRWCSTRSTDCAA 413
TC C W+G C+T +T C A
Sbjct: 3 TCGTCSCFDSWSGDNCECTTDTTGCKA 29
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 493 TCSMARCSKLWAGSWRWCSTRSTDCAA 413
TC C W+G C+T +T C A
Sbjct: 3 TCGTCSCFDSWSGDNCECTTDTTGCKA 29
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 493 TCSMARCSKLWAGSWRWCSTRSTDCAA 413
TC C W+G C+T +T C A
Sbjct: 3 TCGTCSCFDSWSGDNCECTTDTTGCKA 29
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 493 TCSMARCSKLWAGSWRWCSTRSTDCAA 413
TC C W+G C+T +T C A
Sbjct: 3 TCGTCSCFDSWSGDNCECTTDTTGCKA 29
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 493 TCSMARCSKLWAGSWRWCSTRSTDCAA 413
TC C W+G C+T +T C A
Sbjct: 579 TCGTCSCFDSWSGDNCECTTDTTGCKA 605
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 5.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 192 SMETSENNPSIQVFTLWERLSDDASKISVFGYKSLSESLEVF 67
S ET +N S+ F S DAS I+ YK + E+F
Sbjct: 2996 SYETIKNKNSLMRFECCIDCSQDASSITSNSYKVTNWINEIF 3037
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 6.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 363 MSEYLRGYKLGRNARMLAAQSV 428
+SEY G++LGR+ +LA Q V
Sbjct: 527 LSEYQYGFRLGRST-LLAIQQV 547
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 6.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 251 PAICDRAVKIRSESGPRFPQVWRPVRIILVSKS 153
P + ++ K E+G FP W+ +++L++KS
Sbjct: 449 PEVFAKSYKQLLEAGT-FPDAWKRQQLVLLTKS 480
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.0 bits (47), Expect = 8.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 273 YHLLTEDSDVELFDVFQKEYGSGERTQGFPMSEYLRGY 386
Y+L++ S FD+ K+Y S + Q + S+Y Y
Sbjct: 938 YYLIS--SMETFFDLLDKQYDSYNKHQEYKSSDYYYKY 973
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 8.7
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 339 GERTQGFPMSEYLRGYKLGRNARMLAAQSVDRVLHQRQLPAHSLLHRAM 485
G+ P +G+K + L A ++DR+LH+ ++ L +A+
Sbjct: 209 GKEQTPSPRDNAKKGWKTTLYHKELFAAALDRILHEMRVDTPDDLVKAL 257
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,606
Number of Sequences: 2352
Number of extensions: 13323
Number of successful extensions: 88
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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