Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060280.seq
(669 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003595-1|AAO39598.1| 494|Drosophila melanogaster GM20958p pro... 72 8e-13
AE013599-1414|AAF58558.4| 494|Drosophila melanogaster CG33964-P... 72 8e-13
AE013599-549|AAF59163.3| 373|Drosophila melanogaster CG2906-PA,... 33 0.46
AE013599-548|AAM68877.2| 447|Drosophila melanogaster CG2906-PB,... 33 0.46
L08401-1|AAA28840.1| 408|Drosophila melanogaster prd-like homeo... 29 4.3
BT021236-1|AAX33384.1| 783|Drosophila melanogaster RH08748p pro... 29 7.6
AF132566-1|AAD27865.2| 528|Drosophila melanogaster LD24380p pro... 29 7.6
AE014134-212|AAF51408.2| 424|Drosophila melanogaster CG33979-PA... 29 7.6
AE014134-211|AAF51409.2| 783|Drosophila melanogaster CG33979-PB... 29 7.6
BT022385-1|AAY54801.1| 124|Drosophila melanogaster IP05263p pro... 28 10.0
AF273708-1|AAL35411.1| 118|Drosophila melanogaster PFTAIRE-inte... 28 10.0
AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA... 28 10.0
>BT003595-1|AAO39598.1| 494|Drosophila melanogaster GM20958p
protein.
Length = 494
Score = 71.7 bits (168), Expect = 8e-13
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 VPCCYHLLTED-SDVELFDVFQKEYGSGERTQGFPMSEYLRG--YKLGRNARMLAAQSVD 431
V CCYHLL E S E F K + GFP+S+YLR ++GRNARMLAAQS++
Sbjct: 294 VGCCYHLLRERYSQQEFFG--NKSLMELQTDYGFPLSQYLRERQVRMGRNARMLAAQSIE 351
Query: 432 RVLHQRQLPAHSLLHRAMLQVVIKRY 509
R L ++LP +L +RA+L++++ R+
Sbjct: 352 RTLDTKELPNVTLYYRALLEILVCRH 377
Score = 45.2 bits (102), Expect = 8e-05
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 94 FITKDTDLGGVVRETFPECKDLDT-RIILTGLHTCGNLGPDSLRIFTARS 240
FIT + + G ++ E F + + D+ I LTGLHTCGNL L++F A++
Sbjct: 237 FITTELNFGALLAENFTQFRPEDSPNICLTGLHTCGNLAATCLQVFHAQT 286
>AE013599-1414|AAF58558.4| 494|Drosophila melanogaster CG33964-PA,
isoform A protein.
Length = 494
Score = 71.7 bits (168), Expect = 8e-13
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 VPCCYHLLTED-SDVELFDVFQKEYGSGERTQGFPMSEYLRG--YKLGRNARMLAAQSVD 431
V CCYHLL E S E F K + GFP+S+YLR ++GRNARMLAAQS++
Sbjct: 294 VGCCYHLLRERYSQQEFFG--NKSLMELQTDYGFPLSQYLRERQVRMGRNARMLAAQSIE 351
Query: 432 RVLHQRQLPAHSLLHRAMLQVVIKRY 509
R L ++LP +L +RA+L++++ R+
Sbjct: 352 RTLDTKELPNVTLYYRALLEILVCRH 377
Score = 45.2 bits (102), Expect = 8e-05
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 94 FITKDTDLGGVVRETFPECKDLDT-RIILTGLHTCGNLGPDSLRIFTARS 240
FIT + + G ++ E F + + D+ I LTGLHTCGNL L++F A++
Sbjct: 237 FITTELNFGALLAENFTQFRPEDSPNICLTGLHTCGNLAATCLQVFHAQT 286
>AE013599-549|AAF59163.3| 373|Drosophila melanogaster CG2906-PA,
isoform A protein.
Length = 373
Score = 32.7 bits (71), Expect = 0.46
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 40 TEEKPPHFNKDLQRFAQA-FITKDTDLGGVVRETFPECKDLDTRIILTGLHTCGNLGPDS 216
+E++ HF + + + TK +R+ + D + R + GLH CGNLGP
Sbjct: 101 SEDETTHFQRPVHLTHRLESSTKPEQFLSSIRQAL-QLTDDNFRFGVIGLHPCGNLGPTL 159
Query: 217 LRIF 228
+R+F
Sbjct: 160 MRMF 163
>AE013599-548|AAM68877.2| 447|Drosophila melanogaster CG2906-PB,
isoform B protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.46
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 40 TEEKPPHFNKDLQRFAQA-FITKDTDLGGVVRETFPECKDLDTRIILTGLHTCGNLGPDS 216
+E++ HF + + + TK +R+ + D + R + GLH CGNLGP
Sbjct: 175 SEDETTHFQRPVHLTHRLESSTKPEQFLSSIRQAL-QLTDDNFRFGVIGLHPCGNLGPTL 233
Query: 217 LRIF 228
+R+F
Sbjct: 234 MRMF 237
>L08401-1|AAA28840.1| 408|Drosophila melanogaster prd-like homeobox
protein protein.
Length = 408
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 206 PRFPQVWRPVRIILVSKSLHSGNVSLTTPPRS 111
PR P + +P +++ S LHS N L +PP S
Sbjct: 251 PRGPPLGKPPALLVGSPDLHSPNHMLASPPTS 282
>BT021236-1|AAX33384.1| 783|Drosophila melanogaster RH08748p
protein.
Length = 783
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 464 VGRQLALVQHAVHGLRRQHARVATQLVASQILRHRETLRPLSTSVLLLENIEEFH 300
V + LV+ A G + Q+ +ATQ+ + E L+P ST + +++ E H
Sbjct: 387 VAQHAELVKSAF-GSQLQYVTLATQIAQPAQPKQAELLKPTSTQISAIQDFREKH 440
>AF132566-1|AAD27865.2| 528|Drosophila melanogaster LD24380p
protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 464 VGRQLALVQHAVHGLRRQHARVATQLVASQILRHRETLRPLSTSVLLLENIEEFH 300
V + LV+ A G + Q+ +ATQ+ + E L+P ST + +++ E H
Sbjct: 132 VAQHAELVKSAF-GSQLQYVTLATQIAQPAQPKQAELLKPTSTQISAIQDFREKH 185
>AE014134-212|AAF51408.2| 424|Drosophila melanogaster CG33979-PA,
isoform A protein.
Length = 424
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 464 VGRQLALVQHAVHGLRRQHARVATQLVASQILRHRETLRPLSTSVLLLENIEEFH 300
V + LV+ A G + Q+ +ATQ+ + E L+P ST + +++ E H
Sbjct: 28 VAQHAELVKSAF-GSQLQYVTLATQIAQPAQPKQAELLKPTSTQISAIQDFREKH 81
>AE014134-211|AAF51409.2| 783|Drosophila melanogaster CG33979-PB,
isoform B protein.
Length = 783
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 464 VGRQLALVQHAVHGLRRQHARVATQLVASQILRHRETLRPLSTSVLLLENIEEFH 300
V + LV+ A G + Q+ +ATQ+ + E L+P ST + +++ E H
Sbjct: 387 VAQHAELVKSAF-GSQLQYVTLATQIAQPAQPKQAELLKPTSTQISAIQDFREKH 440
>BT022385-1|AAY54801.1| 124|Drosophila melanogaster IP05263p
protein.
Length = 124
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 415 RRSPWTACCTSASCRPTAYCTAPC 486
R SP +CCTS SC + C PC
Sbjct: 43 RCSP-RSCCTSESCCKSGSCCGPC 65
>AF273708-1|AAL35411.1| 118|Drosophila melanogaster
PFTAIRE-interacting factor 2 protein.
Length = 118
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 430 TACCTSASCRPTAYCTAPCC 489
T CCT C P C PCC
Sbjct: 59 TPCCTPC-CTPCCKCCTPCC 77
>AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA
protein.
Length = 118
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 430 TACCTSASCRPTAYCTAPCC 489
T CCT C P C PCC
Sbjct: 59 TPCCTPC-CTPCCKCCTPCC 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,035,488
Number of Sequences: 53049
Number of extensions: 602652
Number of successful extensions: 2099
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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