Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060279.seq
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   9.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.3  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 585 PDW*QSYCARCSRN*RHGTLRVRR 656
           PD   + C++CS   ++G+ ++ R
Sbjct: 68  PDALHTECSKCSETQKNGSKKIMR 91



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 102 RRFLPEKLHTFCN 64
           +R LP+ LHT C+
Sbjct: 64  KRHLPDALHTECS 76


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 579 VQPDW*QSYCARCSRN*RHGTLRV 650
           V PD  +S CA+CS   +  T +V
Sbjct: 61  VLPDALKSDCAKCSEKQKEMTKKV 84


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 133  WTNKPESWCTLT 168
            WT KP +W + T
Sbjct: 1035 WTTKPSTWWSST 1046


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 187 NCVFIILLMYTNSLVCSS 134
           NCV +I  +Y  S VC +
Sbjct: 257 NCVIVIFELYYLSHVCQN 274


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 385 ATYRIVFIFKILDVIVKSINFIAV 314
           ATY    I+K  ++I+  +N + V
Sbjct: 341 ATYDSFMIYKTTNIIILGLNVVYV 364


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 385 ATYRIVFIFKILDVIVKSINFIAV 314
           ATY    I+K  ++I+  +N + V
Sbjct: 66  ATYDSFMIYKTTNIIILGLNVVYV 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,121
Number of Sequences: 336
Number of extensions: 3354
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)