Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060278.seq
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   6.6  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   8.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   8.7  

>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 435 QHWMRLNTLSCTTVGGSFL 379
           QHW+R + L C T     L
Sbjct: 10  QHWLRSSVLPCGTTSNRLL 28


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 248 SACSQPFSYCF-NGIFRSVRTAVY 180
           S+C  P +YCF N  FR     V+
Sbjct: 515 SSCCNPITYCFMNRRFRQAFLGVF 538


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 17/76 (22%), Positives = 32/76 (42%)
 Frame = -1

Query: 496 KLVVHLTDSL*FSLVLEGIGPTLDEAQYFVLHHRRRIIFGANQFYQL*YKFLIADENMER 317
           KL +H  +S    + +     T+D     VL+H     F    + ++ +  L A  N E 
Sbjct: 241 KLNLHEPESNRMGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQHLALHAFHNTEN 300

Query: 316 LSTVFYACFQDSQRVH 269
            +    +C+Q ++  H
Sbjct: 301 EAMRAESCYQLARAFH 316


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,147
Number of Sequences: 2352
Number of extensions: 18282
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)