Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060277.seq
(678 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U4Y5 Cluster: Hitcher protein; n=1; Manduca sexta|Rep... 136 3e-31
UniRef50_P46459 Cluster: Vesicle-fusing ATPase; n=64; Eumetazoa|... 54 3e-06
UniRef50_Q5BW48 Cluster: SJCHGC06751 protein; n=1; Schistosoma j... 50 7e-05
UniRef50_Q4U0S6 Cluster: N-ethylmaleimide-sensitive factor b; n=... 45 0.002
UniRef50_Q9NHP4 Cluster: 41-3 antigen; n=10; Plasmodium|Rep: 41-... 37 0.39
UniRef50_Q1GUE7 Cluster: Carotenoid oxygenase; n=5; Alphaproteob... 35 1.6
UniRef50_A0VIL8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q2GXX7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q3V2V3 Cluster: Bladder RCB-0544 MBT-2 cDNA, RIKEN full... 34 2.8
UniRef50_P20930 Cluster: Filaggrin; n=18; Catarrhini|Rep: Filagg... 34 2.8
UniRef50_Q677Q6 Cluster: Cell division protein 48; n=1; Lymphocy... 33 6.4
UniRef50_A3WKH9 Cluster: Serine/threonine kinase with two-compon... 33 6.4
UniRef50_UPI0000E4884A Cluster: PREDICTED: similar to SPBPJ4664.... 33 8.4
UniRef50_A0KM61 Cluster: Transporter, 10 TMS drug/metabolite exp... 33 8.4
UniRef50_Q172E8 Cluster: Putative uncharacterized protein; n=3; ... 33 8.4
>UniRef50_Q9U4Y5 Cluster: Hitcher protein; n=1; Manduca sexta|Rep:
Hitcher protein - Manduca sexta (Tobacco hawkmoth)
(Tobacco hornworm)
Length = 291
Score = 136 bits (330), Expect = 3e-31
Identities = 71/117 (60%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
Frame = +3
Query: 267 KLTECAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEISPAKMPLMRIRSVE 446
K+ EC PCTSDLRSYEIDYDD+SE T+S +D HKK M A+ E+SPAKMPLMRIRSVE
Sbjct: 2 KVNECTPCTSDLRSYEIDYDDISECTESFMDFS-HKKGMTARGNELSPAKMPLMRIRSVE 60
Query: 447 IVFEDEMSTCTDTGLLDRSVDSSSRTVAMILLNAPDGIE---PLPXEKDCDSVTLNA 608
IV+EDEMSTCTDTG+LDRSV+ + + D +E + E DSVTLNA
Sbjct: 61 IVYEDEMSTCTDTGILDRSVELLASDSSDDSTKCVDDLEHNMVVEKEGQYDSVTLNA 117
>UniRef50_P46459 Cluster: Vesicle-fusing ATPase; n=64;
Eumetazoa|Rep: Vesicle-fusing ATPase - Homo sapiens
(Human)
Length = 744
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVDL 156
I ++G K++IGIKKLL LI+M Q D EYRV KFL L+EEG L
Sbjct: 694 IAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPL 741
>UniRef50_Q5BW48 Cluster: SJCHGC06751 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06751 protein - Schistosoma
japonicum (Blood fluke)
Length = 189
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVD 153
I+ L G ++ IGIK LL LID+V + D +RV FL KL+E G VD
Sbjct: 142 IEKSLSGRRLCIGIKHLLDLIDLVSKNDANHRVAAFLAKLEEVGIVD 188
>UniRef50_Q4U0S6 Cluster: N-ethylmaleimide-sensitive factor b; n=8;
Clupeocephala|Rep: N-ethylmaleimide-sensitive factor b -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 747
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCV 150
I ++G +++GIKKL LI+M Q EYRV KFL L+EEG +
Sbjct: 694 IGKQVKGQSVWLGIKKLQMLIEMSLQMPLEYRVQKFLALLKEEGAL 739
>UniRef50_Q9NHP4 Cluster: 41-3 antigen; n=10; Plasmodium|Rep: 41-3
antigen - Plasmodium falciparum
Length = 375
Score = 37.1 bits (82), Expect = 0.39
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +3
Query: 327 DVSESTDSPLDIGYHKKEMAAKRTEISPAKMPLMRIRSVEIVFEDEMSTCTDTGLLDRSV 506
D D P+D Y+ K + + ++SP + PL ++ S EI + + G++ +
Sbjct: 25 DEQNINDWPIDFEYNSKSLPSIEVKLSPPENPLPQV-SAEIKILESARLKLEEGMMQKLE 83
Query: 507 DSSSRTVAMILLNAPDGIE 563
D +++++M L D +E
Sbjct: 84 DEYNKSLSMAKLKIKDTVE 102
>UniRef50_Q1GUE7 Cluster: Carotenoid oxygenase; n=5;
Alphaproteobacteria|Rep: Carotenoid oxygenase -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 498
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -2
Query: 536 NHRYC--PRRRVHAAVQEPGVGASRHFVFKYDLDASDSHEWHFG-GRY 402
NHRY P R ++A+ EPG R V K+DLD+ S + FG GR+
Sbjct: 372 NHRYAGKPYRYAYSAIPEPGWFLFRGIV-KHDLDSRTSEAYEFGRGRF 418
>UniRef50_A0VIL8 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 174
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 251 DVQRVAVWSVVGDVVCACNP*GCDDSYCMVVPRSTQPSSCNFVRNLNTLYSSSVC 87
D+ + + SV GDV+ A G +Y V+PR T+P C V N+N Y + C
Sbjct: 72 DLTEITLCSV-GDVIYAPVD-GVFPAYERVLPRGTEPEQCPGVMNINPKYLADAC 124
>UniRef50_Q2GXX7 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1506
Score = 34.7 bits (76), Expect = 2.1
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 351 PLDIGYHKK-EMAAKRTEISPAKMPLMRIRSVEIVFEDEMSTCTDTGLLDRSVDSSSRTV 527
P ++G+ ++ ++ + PL R+R++E+V E C GL+D DS +R V
Sbjct: 566 PSEVGWEDSLKLVLNAFFLNKGREPLTRLRALEVVIEVYDFLCLAQGLVDE--DSVARLV 623
Query: 528 AMILLNAPDGIEPL 569
+L P I+ L
Sbjct: 624 QQVLAELPAEIDSL 637
>UniRef50_Q3V2V3 Cluster: Bladder RCB-0544 MBT-2 cDNA, RIKEN
full-length enriched library, clone:G430055H06
product:hypothetical Actin-crosslinking proteins
containing protein, full insert sequence; n=2; Mus
musculus|Rep: Bladder RCB-0544 MBT-2 cDNA, RIKEN
full-length enriched library, clone:G430055H06
product:hypothetical Actin-crosslinking proteins
containing protein, full insert sequence - Mus musculus
(Mouse)
Length = 429
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/45 (28%), Positives = 30/45 (66%)
Frame = -3
Query: 565 GSIPSGAFSRIIATVRDDESTLRSKSPVSVQVDISSSNTISTLRI 431
GS + F+RI+A +R+ + + +K+P S Q++ ++S+ +S ++
Sbjct: 214 GSEGTSVFARIVAAIREADGVVENKTPASSQMENNNSDELSKSKV 258
>UniRef50_P20930 Cluster: Filaggrin; n=18; Catarrhini|Rep: Filaggrin -
Homo sapiens (Human)
Length = 4061
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 3 HEEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLRRSWHNH 167
H ED+ER + S + + Y A +RHG + R Q + H + R+S H
Sbjct: 1603 HSEDSERRSESASRNHYGSAREQSRHGSRNPRSHQEDRASHGHSAESSRQSGTRH 1657
>UniRef50_Q677Q6 Cluster: Cell division protein 48; n=1;
Lymphocystis disease virus - isolate China|Rep: Cell
division protein 48 - Lymphocystis disease virus -
isolate China
Length = 690
Score = 33.1 bits (72), Expect = 6.4
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 46 IGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEG 144
IGIKKL+A++++V E ++ +FLT L+ G
Sbjct: 655 IGIKKLIAVVEIVSSMQSECKISEFLTFLETGG 687
>UniRef50_A3WKH9 Cluster: Serine/threonine kinase with two-component
sensor domain; n=1; Idiomarina baltica OS145|Rep:
Serine/threonine kinase with two-component sensor domain
- Idiomarina baltica OS145
Length = 1632
Score = 33.1 bits (72), Expect = 6.4
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 556 PSGAFSRIIATVRDDESTLRSKSPVSVQV-DISSSNTISTLRIRMSGILAGDISVLLA 386
PS A +I +VR+DE + S P+S+ + +I +N I I++ + DIS+LLA
Sbjct: 461 PSRAPVLLIGSVREDE--VNSGHPLSIAIQEIERANVIPLKHIQLDELSVDDISLLLA 516
>UniRef50_UPI0000E4884A Cluster: PREDICTED: similar to SPBPJ4664.02;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to SPBPJ4664.02 - Strongylocentrotus purpuratus
Length = 7366
Score = 32.7 bits (71), Expect = 8.4
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 315 IDYDDVSESTDSPLDIGYHKKEMA-AKRTEIS-PAKMPLMRIRSVEIVFEDEMSTCTDTG 488
+++ D S + P++I K M + S P PL+ +I D+M + T+T
Sbjct: 3252 VEHQDQSSMVNIPMEIKTEKIIMQEVPPVQFSAPVFAPLITDSEAQIS-PDQMDSSTNTK 3310
Query: 489 LLDRSVDSSSRTVAMILLNAPDGIEP 566
L DSSS T+A+ + +AP I+P
Sbjct: 3311 LPAIQRDSSSNTLAVSVKDAPAQIKP 3336
>UniRef50_A0KM61 Cluster: Transporter, 10 TMS drug/metabolite
exporter (DME) family; n=1; Aeromonas hydrophila subsp.
hydrophila ATCC 7966|Rep: Transporter, 10 TMS
drug/metabolite exporter (DME) family - Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240)
Length = 363
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 385 PPKGPRYRPPKCHSCESEASRSYLKTKCRLAPTPGSWTA 501
PP GP + P C + S+L +C +AP PG TA
Sbjct: 5 PPCGPPW-PHAASQCTASPPESHLAPRCPVAPPPGGLTA 42
>UniRef50_Q172E8 Cluster: Putative uncharacterized protein; n=3; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 1054
Score = 32.7 bits (71), Expect = 8.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 18 ERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLRRSW 158
++PAR + Y++ + NR+ + S + PH + GG R W
Sbjct: 942 QQPARPVSAPYYQQQQQQNRYSSPSTASLASPRSPHPIGGGQSPRGW 988
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,914,084
Number of Sequences: 1657284
Number of extensions: 11428294
Number of successful extensions: 37529
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 36013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37503
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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