Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060277.seq
(678 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 27 0.19
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 23 1.7
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 4.0
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 4.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 7.0
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 7.0
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 7.0
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 9.3
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 26.6 bits (56), Expect = 0.19
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 72 NRHGEADRRRIQSVQVPHEVAGGGLR 149
+R A +RR+ +VQVP ++AGGG R
Sbjct: 306 HRPALAQQRRVAAVQVP-QLAGGGRR 330
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 339 FR*RHRSLFHSCGG 298
FR RH + H CGG
Sbjct: 256 FRRRHHLVHHKCGG 269
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -2
Query: 221 VGDVVCACNP*GCDDSYCMVVPRSTQPSSCNFVRNLNTLYSS 96
+G C P DD C+ + R + +R T+YSS
Sbjct: 89 LGSYAANCPPSPKDDEKCLSLERPSGGGKGKKMRKPRTIYSS 130
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.2 bits (45), Expect = 4.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 3 HEEDTERPARSQNLHRYKEAARSNRHGEADR 95
HE + ERP + N R + A S++ E +R
Sbjct: 72 HEPEMERPKGASNGKRARTAYTSSQLVELER 102
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.2 bits (45), Expect = 4.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 3 HEEDTERPARSQNLHRYKEAARSNRHGEADR 95
HE + ERP + N R + A S++ E +R
Sbjct: 92 HEPEMERPKGASNGKRARTAYTSSQLVELER 122
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = -3
Query: 223 SWATWYARVIPKVATILIVWLCQ 155
+W ++Y +IP + +L+ + C+
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCK 965
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = -3
Query: 223 SWATWYARVIPKVATILIVWLCQ 155
+W ++Y +IP + +L+ + C+
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCK 965
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = -3
Query: 223 SWATWYARVIPKVATILIVWLCQ 155
+W ++Y +IP + +L+ + C+
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCK 965
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = -3
Query: 223 SWATWYARVIPKVATILIVWLCQ 155
+W ++Y +IP + +L+ + C+
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCK 965
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 36 QNLHRYKEAA 65
Q+LHRYKE A
Sbjct: 160 QHLHRYKEEA 169
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 36 QNLHRYKEAA 65
Q+LHRYKE A
Sbjct: 160 QHLHRYKEEA 169
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 36 QNLHRYKEAA 65
Q+LHRYKE A
Sbjct: 160 QHLHRYKEEA 169
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -3
Query: 256 VWTYKGSRCGR---SWATWYARVIPKVATILIVWLCQDRR 146
+W+ + C R A Y VI +V I+W CQ+ R
Sbjct: 257 LWSCTSTNCPRFLIMLALSYT-VIQEVMLFTILWNCQNTR 295
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,522
Number of Sequences: 336
Number of extensions: 2729
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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