Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060277.seq
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human N-ethylma... 54 5e-07
BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensit... 54 5e-07
BC013314-1|AAH13314.2| 326|Homo sapiens NSF protein protein. 54 5e-07
AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensit... 54 5e-07
AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensit... 54 5e-07
U80997-1|AAG23890.1| 46|Homo sapiens N-ethylmaleimide-sensitiv... 53 8e-07
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 34 0.40
AF043380-1|AAC23559.1| 322|Homo sapiens epidermal filaggrin pro... 33 0.93
AJ415024-1|CAC94182.1| 78|Homo sapiens immunoglobulin heavy ch... 31 2.8
Z26828-1|CAA81425.1| 124|Homo sapiens immunoglobulin variable r... 31 3.8
D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein. 31 3.8
D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein. 31 3.8
BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome mai... 31 3.8
BC030131-1|AAH30131.2| 808|Homo sapiens MCM2 protein protein. 31 3.8
BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintena... 31 3.8
BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintena... 31 3.8
BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintena... 31 3.8
BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintena... 31 3.8
BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintena... 31 3.8
BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintena... 31 3.8
AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome mai... 31 3.8
BC031481-1|AAH31481.1| 227|Homo sapiens zinc finger, AN1-type d... 31 5.0
AL589655-1|CAI13989.1| 228|Homo sapiens zinc finger, AN1-type d... 31 5.0
AL133377-1|CAI42532.1| 228|Homo sapiens zinc finger, AN1-type d... 31 5.0
AL121574-1|CAI20983.1| 228|Homo sapiens zinc finger, AN1-type d... 31 5.0
AK023284-1|BAB14508.1| 227|Homo sapiens protein ( Homo sapiens ... 31 5.0
AL589655-3|CAI13991.1| 92|Homo sapiens zinc finger, AN1-type d... 30 6.6
AL121574-2|CAI20984.1| 92|Homo sapiens zinc finger, AN1-type d... 30 6.6
AJ301445-1|CAC34150.1| 89|Homo sapiens T-cell receptor beta ch... 30 8.7
AF471196-1|AAQ05371.1| 114|Homo sapiens Ig heavy chain variable... 30 8.7
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 30 8.7
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 30 8.7
>U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human
N-ethylmaleimide-sensitive factor mRNA, partial cds. ).
Length = 751
Score = 54.0 bits (124), Expect = 5e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVDL 156
I ++G K++IGIKKLL LI+M Q D EYRV KFL L+EEG L
Sbjct: 701 IAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPL 748
>BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 54.0 bits (124), Expect = 5e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVDL 156
I ++G K++IGIKKLL LI+M Q D EYRV KFL L+EEG L
Sbjct: 694 IAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPL 741
>BC013314-1|AAH13314.2| 326|Homo sapiens NSF protein protein.
Length = 326
Score = 54.0 bits (124), Expect = 5e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVDL 156
I ++G K++IGIKKLL LI+M Q D EYRV KFL L+EEG L
Sbjct: 276 IAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPL 323
>AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 54.0 bits (124), Expect = 5e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVDL 156
I ++G K++IGIKKLL LI+M Q D EYRV KFL L+EEG L
Sbjct: 694 IAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPL 741
>AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 54.0 bits (124), Expect = 5e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 13 IQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVDL 156
I ++G K++IGIKKLL LI+M Q D EYRV KFL L+EEG L
Sbjct: 694 IAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPL 741
>U80997-1|AAG23890.1| 46|Homo sapiens N-ethylmaleimide-sensitive
factor-like protein protein.
Length = 46
Score = 53.2 bits (122), Expect = 8e-07
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +1
Query: 28 RGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCVDL 156
+G K++IGIKKLL LI+M Q D EYRV KFL L+EEG L
Sbjct: 1 KGKKVWIGIKKLLMLIEMSLQMDPEYRVXKFLALLREEGASPL 43
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 3 HEEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLRRSWHNH 167
H ED+ER + S + + Y A +RHG + R Q + H + R+S H
Sbjct: 1603 HSEDSERRSESASRNHYGSAREQSRHGSRNPRSHQEDRASHGHSAESSRQSGTRH 1657
>AF043380-1|AAC23559.1| 322|Homo sapiens epidermal filaggrin
protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.93
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 3 HEEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLRRSWHNH 167
H ED+ER + S + + Y + +RHG + R Q + H + R+S H
Sbjct: 162 HSEDSERRSESASRNHYGSSREQSRHGSRNPRSHQEDRASHGHSAESSRQSGTRH 216
>AJ415024-1|CAC94182.1| 78|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 78
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 532 IATVRDDESTLRSKSPVSVQVDISSSNTISTLRIRMSGILAGDISVLLAA 383
+A +++DES V + IS N S+L ++MSG+ A D +V A
Sbjct: 19 VANIKEDESEKYYVDSVKGRFTISRDNAKSSLYLQMSGLRAEDTAVYYCA 68
>Z26828-1|CAA81425.1| 124|Homo sapiens immunoglobulin variable
region protein.
Length = 124
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 532 IATVRDDESTLRSKSPVSVQVDISSSNTISTLRIRMSGILAGDISVLLAA 383
I + D+S +R QV IS+ +IST ++ SG+ A D ++ A
Sbjct: 49 IGIIYPDDSDIRYSPSFQGQVTISADKSISTAYLQWSGLKASDTAMFYCA 98
>D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein.
Length = 895
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 132 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 174
>D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein.
Length = 914
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 151 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 193
>BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 895
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 132 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 174
>BC030131-1|AAH30131.2| 808|Homo sapiens MCM2 protein protein.
Length = 808
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 45 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 87
>BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 141 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 183
>BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 141 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 183
>BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 141 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 183
>BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 141 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 183
>BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 141 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 183
>BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 141 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 183
>AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 6 EEDTERPARSQNLHRYKEAARSNRHGEADRRRIQSVQVPHEVAGGGLR 149
EED ERPAR + ++ R+ GE D I+S++ ++ G +R
Sbjct: 141 EEDEERPARKR-----RQVERATEDGEEDEEMIESIENLEDLKGHSVR 183
>BC031481-1|AAH31481.1| 227|Homo sapiens zinc finger, AN1-type
domain 3 protein.
Length = 227
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Frame = +3
Query: 228 PHRDPLYVQTHGAKLTECAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEI- 404
P R P + C+ C +D + + D D +++S D+ + T I
Sbjct: 15 PPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSIT 74
Query: 405 ----SPAKMPLMRIRSVEIVFEDEMSTCTDT 485
SP++ PL +V ++E CTDT
Sbjct: 75 TPTLSPSQQPLPTELNVTSPSKEECGPCTDT 105
>AL589655-1|CAI13989.1| 228|Homo sapiens zinc finger, AN1-type
domain 3 protein.
Length = 228
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Frame = +3
Query: 228 PHRDPLYVQTHGAKLTECAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEI- 404
P R P + C+ C +D + + D D +++S D+ + T I
Sbjct: 15 PPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSIT 74
Query: 405 ----SPAKMPLMRIRSVEIVFEDEMSTCTDT 485
SP++ PL +V ++E CTDT
Sbjct: 75 TPTLSPSQQPLPTELNVTSPSKEECGPCTDT 105
>AL133377-1|CAI42532.1| 228|Homo sapiens zinc finger, AN1-type
domain 3 protein.
Length = 228
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Frame = +3
Query: 228 PHRDPLYVQTHGAKLTECAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEI- 404
P R P + C+ C +D + + D D +++S D+ + T I
Sbjct: 15 PPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSIT 74
Query: 405 ----SPAKMPLMRIRSVEIVFEDEMSTCTDT 485
SP++ PL +V ++E CTDT
Sbjct: 75 TPTLSPSQQPLPTELNVTSPSKEECGPCTDT 105
>AL121574-1|CAI20983.1| 228|Homo sapiens zinc finger, AN1-type
domain 3 protein.
Length = 228
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Frame = +3
Query: 228 PHRDPLYVQTHGAKLTECAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEI- 404
P R P + C+ C +D + + D D +++S D+ + T I
Sbjct: 15 PPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSIT 74
Query: 405 ----SPAKMPLMRIRSVEIVFEDEMSTCTDT 485
SP++ PL +V ++E CTDT
Sbjct: 75 TPTLSPSQQPLPTELNVTSPSKEECGPCTDT 105
>AK023284-1|BAB14508.1| 227|Homo sapiens protein ( Homo sapiens
cDNA FLJ13222 fis, clone NT2RP4002083. ).
Length = 227
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Frame = +3
Query: 228 PHRDPLYVQTHGAKLTECAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEI- 404
P R P + C+ C +D + + D D +++S D+ + T I
Sbjct: 15 PPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSIT 74
Query: 405 ----SPAKMPLMRIRSVEIVFEDEMSTCTDT 485
SP++ PL +V ++E CTDT
Sbjct: 75 TPTLSPSQQPLPTELNVTSPSKEECGPCTDT 105
>AL589655-3|CAI13991.1| 92|Homo sapiens zinc finger, AN1-type
domain 3 protein.
Length = 92
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 279 CAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEI-----SPAKMPLMRIRSV 443
C+ C +D + + D D +++S D+ + T I SP++ PL +V
Sbjct: 4 CSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNV 63
Query: 444 EIVFEDEMSTCTDT 485
++E CTDT
Sbjct: 64 TSPSKEECGPCTDT 77
>AL121574-2|CAI20984.1| 92|Homo sapiens zinc finger, AN1-type
domain 3 protein.
Length = 92
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 279 CAPCTSDLRSYEIDYDDVSESTDSPLDIGYHKKEMAAKRTEI-----SPAKMPLMRIRSV 443
C+ C +D + + D D +++S D+ + T I SP++ PL +V
Sbjct: 4 CSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNV 63
Query: 444 EIVFEDEMSTCTDT 485
++E CTDT
Sbjct: 64 TSPSKEECGPCTDT 77
>AJ301445-1|CAC34150.1| 89|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 89
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 135 GGGLRRSWHNHTIRIVATLGITRAYHVAHDRPHRDPLYVQTHGAKLTECAPCTSDLRSYE 314
G GLR + ++ +++ I Y V+ ++ R L +++ T C S L SYE
Sbjct: 15 GLGLRLIYFSYDVKMKEKGDIPEGYSVSREKKERFSLILESASTNQTSMYLCASSLGSYE 74
>AF471196-1|AAQ05371.1| 114|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 114
Score = 29.9 bits (64), Expect = 8.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 556 PSGAFSRIIATVRDDESTLRSKSPVSVQVDISSSNTISTLRIRMSGILAGDISVLLAAIS 377
P G +AT++ D S S V + IS N ++L ++M+ + D +V A S
Sbjct: 40 PPGKGLEWVATIKPDGSEKSSVDSVKGRFTISRDNAQNSLNLQMNSLRVDDTAVYFCATS 99
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 386 RQKDRDIARQNATHANPKRRDRI*RRNVDLHRHRALGPQR 505
R K RD+A Q THANP+ R ++ R+ R R+ R
Sbjct: 608 RSKQRDVA-QARTHANPRGRPKMGSRSTSESRSRSRSRSR 646
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 386 RQKDRDIARQNATHANPKRRDRI*RRNVDLHRHRALGPQR 505
R K RD+A Q THANP+ R ++ R+ R R+ R
Sbjct: 553 RSKQRDVA-QARTHANPRGRPKMGSRSTSESRSRSRSRSR 591
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,855,330
Number of Sequences: 237096
Number of extensions: 1700285
Number of successful extensions: 4849
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4849
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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