Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060276.seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 81 8e-16
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 8e-15
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 75 5e-14
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 57 1e-08
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 54 1e-07
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 48 5e-06
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 48 5e-06
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 47 2e-05
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 45 5e-05
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 42 4e-04
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 38 0.006
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 32 0.38
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 32 0.50
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 31 0.66
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_20609| Best HMM Match : Keratin_B2 (HMM E-Value=4) 31 1.1
SB_52722| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 30 1.5
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 29 2.7
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 29 4.6
SB_30632| Best HMM Match : Acyltransferase (HMM E-Value=0.0097) 29 4.6
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 29 4.6
SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38) 28 6.1
SB_16330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 28 6.1
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 28 8.1
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 81.0 bits (191), Expect = 8e-16
Identities = 36/91 (39%), Positives = 50/91 (54%)
Frame = +1
Query: 268 GTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIIT 447
G KK+ Y+++ +H+KCF C CK PIG+K FI R++ C C++ KFA CVKCN++I
Sbjct: 186 GEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIK 245
Query: 448 QGRRYVQERTVAPRVLHVHERNTSLAGQRFT 540
T H + LAG FT
Sbjct: 246 TSSVQHAGSTYHSECFTCHHCDKPLAGSPFT 276
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +1
Query: 262 VAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKI 441
V T +++ +H +CF C C P+ F +E C CY +++A RC C+ +
Sbjct: 243 VIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNL 302
Query: 442 ITQGRRYV--QERTVAPRVLHVHERNTSLAGQRF 537
I ++V E+ + N LAG++F
Sbjct: 303 IEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKF 336
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 301 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKI 441
WH KCF C + + ++ EIYC + +K RC C ++
Sbjct: 105 WHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWGEKLKPRCAGCEEM 151
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +1
Query: 286 YKTRQWHEKCFC-CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGRRY 462
Y R W EK C C+ + F +++++ C GC + C CN G +
Sbjct: 132 YCCRHWGEKLKPRCAGCEEM--NEGFTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKK 189
Query: 463 V--QERTVAPRVLHVHERNTSLAGQRFTFARREALTAAECF 579
V Q +T + E + ++F R E CF
Sbjct: 190 VGYQSKTFHDKCFICDECKQPIGSKQF-IRRDERRLCNNCF 229
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 458 VTYKNEPWHRECFTCTNATRRSPASGSLSRDEKPLLRP 571
V Y + +HRECFTC + RD + + P
Sbjct: 310 VAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLP 347
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 77.8 bits (183), Expect = 8e-15
Identities = 34/106 (32%), Positives = 50/106 (47%)
Frame = +1
Query: 265 AGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII 444
+G ++EY WHE CF C C IGT F+P++ +C GCY+ KF+ RC C + +
Sbjct: 411 SGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPL 470
Query: 445 TQGRRYVQERTVAPRVLHVHERNTSLAGQRFTFARREALTAAECFG 582
+G T + + SLA F+ R EC+G
Sbjct: 471 LEGGVLYNGETWHKACFSCYFCHRSLASAAFS-VRDGCRYCMECYG 515
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 286 YKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGRRYV 465
Y WH+ CF C C + + +F R+ YC CY +A +C C K I G Y
Sbjct: 477 YNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYT 536
Query: 466 QERTVAPRVLHVHER-NTSLAGQRFTFARREALTAAEC 576
E + + + R SLA + F + L +C
Sbjct: 537 LEESNFHKECFMCSRCGRSLASEGFV-REGDELLCGDC 573
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 295 RQWHEKCFCCVVCKNPIGTK-SFIPREQEIYCAGCYEDKFATRCVKCNKIITQG 453
R WH+KCF C +C+ P+ + F +I C CY + C C ++I G
Sbjct: 359 RHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYVANYQKECFACGQMIDSG 412
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 295 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII 444
+ WH F C C + I + FI R + C C++D +A C C++ I
Sbjct: 297 KNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKI 346
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/102 (32%), Positives = 48/102 (47%)
Frame = +1
Query: 277 KMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGR 456
++EY WHE CF C C IGT F+P++ +C GCY+ KF+ RC C + + +G
Sbjct: 3 RLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGG 62
Query: 457 RYVQERTVAPRVLHVHERNTSLAGQRFTFARREALTAAECFG 582
T + + SLA F+ R EC+G
Sbjct: 63 VLYNGETWHKACFSCYFCHRSLASAAFS-VRDGCRYCMECYG 103
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 286 YKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGRRYV 465
Y WH+ CF C C + + +F R+ YC CY +A +C C K I G Y
Sbjct: 65 YNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYT 124
Query: 466 QERTVAPRVLHVHER-NTSLAGQRFTFARREALTAAEC 576
E + + + R SLA + F + L +C
Sbjct: 125 LEESNFHKECFMCSRCGRSLASEGFV-REGDELLCGDC 161
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 57.2 bits (132), Expect = 1e-08
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 295 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCN 435
+ WH + F CV C+ P+GT++F R+ + YC Y D FA RC CN
Sbjct: 299 KTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCN 345
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 301 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRC 423
WH + F C C NP G F R+ + +C Y FA RC
Sbjct: 360 WHPEHFVCAECGNPFGDTGFHERDGKPFCREDYYAMFAPRC 400
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 295 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNK-IITQGRRYVQE 471
R WH++ FCC+ C +G + ++ R + +C CY+ +A C+ C K I +R+ E
Sbjct: 392 RNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYYAKHCMSCKKNIAADAQRF--E 449
Query: 472 RTVAPRVLHVHERNTSLAGQRFTFARR 552
VA + + + TSL G+ A +
Sbjct: 450 HQVAKFL--ITQYRTSLIGRGALIANK 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 301 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII-TQGRRYVQERT 477
WH CF C VC N + + ++ IYC Y ++F RC C+++I ++ ++R
Sbjct: 334 WHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSETYTQAEDRN 393
Query: 478 VAPRVLHVHERNTSLAGQRFTFARREALTAAECF 579
R E + L GQ + AR EC+
Sbjct: 394 WHQRHFCCLECDRDLGGQLYV-ARGGQPHCLECY 426
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 253 KKTVAGTKKMEYKTR-QWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVK 429
++ + GT K + +H CF C C+ P+ K+F E C CY D++A RC
Sbjct: 65 RQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAKRCNM 124
Query: 430 CNKIITQGRRYVQ 468
C++ + +V+
Sbjct: 125 CHQSLEANVEFVK 137
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +1
Query: 256 KTVAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCN 435
KT+ + + Y+ + H +CF C C+ P+ K+F R+ C C +A RCV C
Sbjct: 7 KTITSSV-VRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKRCVACR 65
Query: 436 KIITQGRRYV--QERTVAPRVLHVHERNTSLAGQRFT 540
+ I ++V E T LAG+ FT
Sbjct: 66 QYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFT 102
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 458 VTYKNEPWHRECFTCTNATRRSPASGS 538
V Y + +H ECF C N R P SG+
Sbjct: 136 VKYDEKLYHNECFVCQNPRCRKPLSGA 162
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 458 VTYKNEPWHRECFTCTNATRRSPASGSL--SRDEKPLLR 568
V Y+N+P H ECF C + R+P +G RD++ + +
Sbjct: 14 VRYQNKPHHSECFVCFHC--RTPLAGKTFQMRDDRKVCK 50
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 48.4 bits (110), Expect = 5e-06
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 301 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII 444
WH + FCC C P+G ++ R+ + YC C+E +A C C + I
Sbjct: 163 WHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEFCDSCGEPI 210
Score = 43.2 bits (97), Expect = 2e-04
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 301 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII 444
WH CF C CK + + ++ ++YC + + RC C++II
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAETLKPRCAACDEII 150
Score = 34.3 bits (75), Expect = 0.093
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 277 KMEYKTRQWH--EKCFCCVVCKNPIGTKSFIPREQEIYCA 390
+M + + WH +CF C C + F+P+ EIYC+
Sbjct: 216 QMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYCS 255
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 280 MEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII 444
M+ WHE C C +C++ + ++S +++++YC YE F T+C C K I
Sbjct: 59 MKVVDEAWHESCLQCCICRSQL-SRSCFSKDRKLYCRTDYEKVFGTKCSGCKKTI 112
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 295 RQWHEKCFCCVVCKNPIGTKSFI-PREQEIYCAGCYEDKFATRCVKCNKII 444
R WH KC C +C + +G ++ ++ +IYC Y +F T+C +C + I
Sbjct: 120 RAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFGTKCARCGRSI 170
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 247 RSKKTVAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATR 420
R KTV ++ ++WH+ C C C + + + ++ EIYC GCY F +
Sbjct: 12 RCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGPK 69
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 KMEYKT---RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKC 432
K EYK +++H CF CVVC+ + T F R E+YC Y KF + C C
Sbjct: 20 KTEYKYAIGKRFHNACFRCVVCEERLST-DFYARGSELYCKKDYLSKFNSVCHIC 73
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 295 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIIT 447
+ WH + F C C+ P + R+ YC Y + + C +CNK IT
Sbjct: 98 KAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDICFECNKAIT 148
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 256 KTVAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCN 435
+ + G++ + +QWH CF C C + + + ++ + + YC Y++ F C CN
Sbjct: 94 EAIKGSQALLALEKQWHLWCFSCTKC-HCLLSLEYMGMDGKPYCEKDYQELFGVTCAACN 152
Query: 436 KIIT 447
IT
Sbjct: 153 GYIT 156
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 301 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIIT 447
WH +C C CK P+ + F RE +++C + ++ T+C C++ I+
Sbjct: 25 WHAQCVQCSDCKCPLTERCF-SREGKLFCKTDFYRRYGTKCSGCDQGIS 72
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 322 CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII 444
C+VC+N T++ +P C C+ + ++C C ++I
Sbjct: 688 CIVCQNLPVTRALLPCRHACVCGSCF-SRLESKCPLCRQVI 727
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 295 RQWHEKCFCCVVCKNPIGT 351
R WH+ CF CVVC GT
Sbjct: 2051 RYWHDDCFSCVVCHVRFGT 2069
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 280 MEYKTRQWHEKCFCCVVCKNPIGT-KSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGR 456
M + + +H CF C CK + T + F R IYC YE+ KI + +
Sbjct: 324 MRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKEDYEELLREESRNPTKINSLSK 383
Query: 457 RYVQERTVAPRV 492
++R +A +
Sbjct: 384 GRPRKRRIATAI 395
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 256 KTVAGTKKMEYKTRQWHEKCFCCVVCKNPIG--TKSFIPREQEIYCAGCYED 405
K+V +++ + +H+ CF C +C + F+P + YC Y+D
Sbjct: 250 KSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHDKFYCVQHYQD 301
>SB_20609| Best HMM Match : Keratin_B2 (HMM E-Value=4)
Length = 102
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 412 ATRCVKCNKIITQGRRYVQE-RTVAPRVLHVHERNTSLAGQRFTFARREALTAAEC 576
ATRCV +Q RYV T + HVH NT+ R A C
Sbjct: 27 ATRCVHTYNTTSQATRYVHTYNTTSQATRHVHTYNTTSQATRCVHTYNTTSQATRC 82
>SB_52722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 212 FCCALRERCLLGDPRKLLQEPRRWST 289
F CAL C GDP L + P RWS+
Sbjct: 7 FTCALSNSCSPGDPLVLERPPPRWSS 32
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 446 HKGGVTYKNEPWHRECFTCTNATRRSPASGSLSRDEK 556
H V+ +N +H++CF+C + ++ ++ + S D K
Sbjct: 53 HAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGK 89
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 166 IYVSSQRDCGEGKQEVLLCVTGEM-FVRRSKKTVAGTKKMEYKTRQWHEKCFCCVVCKNP 342
+++ + G V LCV M R V +++ + ++H+KCF C C+
Sbjct: 18 LFIPTTWSIGTASDAVSLCVADNMPKCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKK 77
Query: 343 I 345
+
Sbjct: 78 L 78
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +1
Query: 271 TKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYED-------KFATRCVK 429
+K+ E R HE CC +C P + +P YC+ C ++ K +C K
Sbjct: 643 SKEAEGIIRSAHESS-CCPICSRPFKSPKILPC-LHTYCSDCVKEIVRSRLGKLTLQCPK 700
Query: 430 CNKII 444
C + +
Sbjct: 701 CPRSV 705
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 271 TKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIP 366
T +M TRQ+H + F V CK + +SF P
Sbjct: 605 TPQMYTITRQYHPQRFALVSCKTNVFKESFFP 636
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 271 TKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIP 366
T +M TRQ+H + F V CK + +SF P
Sbjct: 187 TPQMYTITRQYHPQRFALVSCKTNVFKESFFP 218
>SB_30632| Best HMM Match : Acyltransferase (HMM E-Value=0.0097)
Length = 263
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 212 FCCA-LRERCLLGDPRKLLQEPRRWST 289
FCC L C GDP L + P RWS+
Sbjct: 10 FCCGELSNSCSPGDPLVLERPPPRWSS 36
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 280 MEYKTRQWHEKCFCCVVC-KNPIGTKSFIPREQEIYCAGCYE-DKFATRCVKCNKIITQG 453
M + + +H CF CV C + + F RE ++C +E + AT + + G
Sbjct: 98 MRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCKADHEIVEKATATAQATHVRNNG 157
Query: 454 RRYVQ 468
+R Q
Sbjct: 158 QRSSQ 162
>SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38)
Length = 742
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 322 CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQ 450
C+VC F P + C GC +C++C + IT+
Sbjct: 625 CMVCSEKKSQLLFKPCNHMVACEGC--GSLMKKCIQCRENITE 665
>SB_16330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 212 FCCALRERCLLGDPRKLLQEPRRWST 289
FC A+ C GDP L + P RWS+
Sbjct: 4 FCEAVSNSCSPGDPLVLERPPPRWSS 29
>SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 212
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 373 QEIYCAGCYED-KFATRCVKCNKIITQGRRYVQE-RTVAPRVLHVHERNTS 519
Q C Y+ ATRCV +Q RYV T + + +VH NT+
Sbjct: 158 QATRCVHTYDTTSLATRCVHTYNTTSQATRYVYTYNTTSLSICYVHTYNTT 208
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/99 (25%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Frame = +1
Query: 301 WHEKCFCCVVCKNPIGT--KSFIPREQEIYCAGCYEDKFATR--CVKCNKIITQGRRYVQ 468
WHE C C C + +G S + I C Y F C CNK I ++
Sbjct: 37 WHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRLFGIPGVCSHCNKPIAAFELVMR 96
Query: 469 ERTVAPRVLHV---HERNTSLAGQRFTFARREALTAAEC 576
R A + R + G+ F F + L C
Sbjct: 97 ARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLCLDRC 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,052,622
Number of Sequences: 59808
Number of extensions: 399554
Number of successful extensions: 2716
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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