Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060275.seq
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 4e-16
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 56 4e-08
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 55 5e-08
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 46 3e-05
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 41 8e-04
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 40 0.002
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.003
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 39 0.003
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 38 0.008
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.013
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 37 0.013
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.031
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.031
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.072
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 34 0.095
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.095
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.29
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 32 0.51
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.2
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.5
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 2.0
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 2.0
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.6
SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14) 29 3.6
SB_34027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_33502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_48330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_11510| Best HMM Match : MGDG_synth (HMM E-Value=5.3) 28 8.3
SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 8.3
SB_17269| Best HMM Match : RRM_1 (HMM E-Value=8.2) 28 8.3
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 100 bits (239), Expect = 1e-21
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 442
G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN
Sbjct: 17 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGN 76
Query: 443 FANVIRYFPTQALNFAFQGQVTA 511
AN IRYFPTQALNFAF+ QV A
Sbjct: 77 LANCIRYFPTQALNFAFKDQVKA 99
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 368 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 460
+YKG +D ++I K++G +S +G AN++R
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILR 278
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/88 (44%), Positives = 61/88 (69%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
LLAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L ++
Sbjct: 38 LLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYF 91
Query: 434 RGNFANVIRYFPTQALNFAFQGQVTAGV 517
+GN NVIR FP A+ FA + G+
Sbjct: 92 KGNGTNVIRIFPYSAVQFAAYEEYKKGI 119
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +2
Query: 263 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 442
GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 443 FANVIRYFPTQALNF 487
ANVI+ P + F
Sbjct: 197 GANVIKIAPESGIKF 211
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/79 (27%), Positives = 45/79 (56%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
LLAG ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+
Sbjct: 234 LLAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFY 286
Query: 434 RGNFANVIRYFPTQALNFA 490
RG F +++ P ++ A
Sbjct: 287 RGLFPSLLGIIPYAGIDLA 305
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 266 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
G +A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 18 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
L GG SA ++++ +P+E VK+L QV + G++ F + K +G+ +FW+
Sbjct: 63 LCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWK 115
Query: 437 GNFANVIRYFPTQALNFAFQGQVTAGV 517
GN + IR FP A+ +A ++ A +
Sbjct: 116 GNGVSCIRLFPYSAVQYAAFNRIVASL 142
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
+LAG S ++ V P E +K L VQHV+K ++ YKG+ A I +E+G+L+ +
Sbjct: 156 MLAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGILALY 212
Query: 434 RGNFANVIRYFPTQALNF-AFQ 496
+G + + FP +F A+Q
Sbjct: 213 KGVTPSFLGLFPFAGGSFLAYQ 234
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 170 PTSTYSPSEDHIIEQNVEPRRSGRVR*GLLA--GGISAAVSKTAVAPIERVKLLLQVQHV 343
P + E I+E+ R G G +A G ++ +AP++ VK+ LQ+Q
Sbjct: 7 PKLIQNADESTILERFQYRRPDGSNTIGQIAFAGSVAGLAQVPLIAPVDLVKIKLQMQTE 66
Query: 344 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 487
+K+ + Y+G VD V++ + +GL ++GN +R P A+ F
Sbjct: 67 AKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYF 113
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
L+AGG + VS + P + +K +Q + RYKG++D ++ KE+G++ F
Sbjct: 136 LMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCALQSYKEEGMIVFT 191
Query: 434 RGNFANVIRYFPTQALNF-AFQGQVTA 511
RG + ++R F Q L F F G + A
Sbjct: 192 RGIWPTLLRGF-LQVLRFLQFTGSLWA 217
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 224 PRRSGRVR*GLLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAF 394
P + V L G +S +SK + P + +K +QVQ + Q+Y G+ D F
Sbjct: 23 PYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCF 82
Query: 395 VRIPKEQGLLSFWRG 439
I KE+G + ++G
Sbjct: 83 RTILKEEGAMGLFKG 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
L G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482
Query: 437 G 439
G
Sbjct: 483 G 483
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
L+AG +S + A P++ +K+ LQ + K +KG +D F++ + +GL +
Sbjct: 24 LIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLY 82
Query: 434 RGNFANVIRYFPTQALNF 487
+G + ++ P+ AL F
Sbjct: 83 KGMLSPLLMATPSTALTF 100
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 269 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 448
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 449 NVIRYFPTQAL 481
++ P +A+
Sbjct: 980 QLLGVSPEKAI 990
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +2
Query: 260 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 439
+GGI+ +S P++ VK Q + +Y G D +I G+ +F +G
Sbjct: 363 SGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Query: 440 NFANVIRYFPTQA 478
A ++R FPT A
Sbjct: 423 LLATILRGFPTNA 435
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA----------ADQRYKGIVDAFVRIP 406
++G I+ V P+E K +QVQ +++ Y G +D ++
Sbjct: 249 ISGAIAGGVQSIVCCPMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVF 308
Query: 407 KEQGLLSFWRGNFANVIRYFPTQALNF-AFQ 496
+GL +RG R P AL F +FQ
Sbjct: 309 HSEGLRGCFRGMAITTTRDIPAFALYFGSFQ 339
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/82 (28%), Positives = 35/82 (42%)
Frame = +2
Query: 260 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 439
A IS + A P++ K +Q + I YKG +D RI + +G+ + W+G
Sbjct: 99 ASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKG 155
Query: 440 NFANVIRYFPTQALNFAFQGQV 505
R P L F F Q+
Sbjct: 156 FTPYYFRIGPHTVLTFIFLEQL 177
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 371 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFQGQ 502
Y + +A R+ KE+G+L+ WRG +R A A Q
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQ 78
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Frame = +2
Query: 260 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKE 412
+ GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K
Sbjct: 20 SAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKT 79
Query: 413 QGLLSFWRGNFANVIRYFPTQALNFAFQGQVTA 511
+G+ + ++G + R ++ QV A
Sbjct: 80 EGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKA 112
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 368 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFQGQVTAGV 517
+Y G+ +I +++GL +++GN N++R P A+ FA + G+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGI 639
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 GLLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LS 427
G + GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G+
Sbjct: 175 GFVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRG 231
Query: 428 FWRGNFANVIRYFPTQALNF 487
+RG N +R P A+ F
Sbjct: 232 LYRGLSINYLRVCPQVAIMF 251
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 380 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 487
++ AF I + +GLL++++GN A ++R FP A+ F
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQF 48
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
+ G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 434 RG 439
G
Sbjct: 174 TG 175
Score = 31.9 bits (69), Expect = 0.51
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 161 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLLAGGISAAVSKTAVAPIERVKLLLQV 334
AA + T P+ DH + N E R G V L + ++ V+ +P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 335 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 460
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 353 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 487
I ++Y G+++AF RI +++G+ +F+RG +I P ++F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISF 63
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
+LAGGI+ + P E VK LQ+ + AA Y+G +D + K G+L +
Sbjct: 44 ILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLY 99
Query: 434 RGNFANVIRYFPTQALNFA 490
RG + + P ++ FA
Sbjct: 100 RGLSSLLYGSVPKASVRFA 118
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 433
L AG I+ + + P++RVK +LQ++ + Y G VD RI +E G+ +
Sbjct: 141 LAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVY 196
Query: 434 RGNFANVIRYFP 469
+G +R P
Sbjct: 197 KGISVTAMRDIP 208
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
+AG + A + P++ +K+ LQ + K YK D F +I + +G+ +R
Sbjct: 43 IAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFR 101
Query: 437 GNFANVIRYFPTQALNFA 490
G ++ P + F+
Sbjct: 102 GVTVPILNSIPNTTVLFS 119
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 36.3 bits (80), Expect = 0.024
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 182 YSPSEDHIIEQNVEPRRSGRVR*GLLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 361
Y + +++ + + RR V +LA GIS ++ + P E + L+ Q +
Sbjct: 911 YERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLCYPHEVARTRLRQQE--SEFLG 968
Query: 362 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALN-FAFQGQV 505
Q+Y+ + +E+G + G +VIR P A+ F ++G V
Sbjct: 969 RQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMFFTYEGVV 1017
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 251 GLLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 430
G LAGG ++ V +T P++ + L +Q Q + KG + G F
Sbjct: 108 GFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGGF 164
Query: 431 WRGNFANVIRYFPTQALNFAFQGQVT 508
++G FA+++ Y P+ A+ +A G T
Sbjct: 165 YKGYFASLMTYAPSSAIWWASYGFYT 190
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 299 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 439
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 260 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 439
AG ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 440 NFANVIRYFP 469
+I P
Sbjct: 268 AVPRMIVIAP 277
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 302 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 481
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 482 NFAF 493
F F
Sbjct: 281 FFGF 284
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 34.3 bits (75), Expect = 0.095
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
++G + V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ ++
Sbjct: 33 VSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYK 90
Query: 437 GNFANVIRYFP 469
G +++ P
Sbjct: 91 GLVPSLVSIAP 101
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 383 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFQGQV 505
+DA ++IP+ +GL S WRG ++ P + F Q+
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQL 104
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
LAG + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
Query: 437 GNFANVIRYFPTQALNF 487
+ P Q L+F
Sbjct: 54 SYTTQLSMNIPFQTLHF 70
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 260 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 436
AG +A + P E +K LQ QH + I+ K G++D ++I + G +R
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 437 GNFANVIRYFP 469
G A R P
Sbjct: 172 GMTATWAREVP 182
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 266 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 284 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 442
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 322 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 423
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 322 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 423
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 322 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 423
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 322 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 423
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 260 AGGISAAVSKTAVAPIERVKLLLQ 331
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 522 GGVDKKTHSGRLTSLVIWASRWVPPEPTFFLCFRGNPLRNLATXPRSSARRMF 680
GG S + + +R PEP F R P+R++ + RSS RR+F
Sbjct: 882 GGRPHVPRSTGKNATTVTGARRHRPEPHLFPLRRHQPVRSIRSGIRSSVRRLF 934
>SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -3
Query: 670 RAEDRGXVAKFRRGLPRK--HKKKVGSGGTHREAQITSEVNRPECVFLSTPPRNTCCYLS 497
R + G A+ + R+ H+K+ GS HR + S+ +P+ V T S
Sbjct: 625 RLQVEGLTAQVNSSVKRRPSHRKRQGSEKVHRVGSVLSDYTKPK-VIRRNKEGVTSSEES 683
Query: 496 LKGEVERLGREVP 458
+ EV+ G +VP
Sbjct: 684 EEDEVDGAGTQVP 696
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 322 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 423
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 490 GEVERLGREVPDDVGEVTTPE*KETLLLGD 401
GE +R+G+ + + G +TTPE K+ L GD
Sbjct: 105 GERQRVGQHLEQNEGWITTPELKDLLDSGD 134
>SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14)
Length = 338
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 659 PGXRCQIPKGVTTKAQEEGWLRRHP 585
P RC+ P+G T A E GW ++P
Sbjct: 140 PRYRCECPQGYTGAACETGWRLKNP 164
>SB_34027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 538 FLSTPPRNTCCYLSLKGEVERLGREVPDDVG 446
FL P R +C Y + + V RL RE P D G
Sbjct: 3 FLRPPSRASCGYCTGRENVARLHREKPCDTG 33
>SB_33502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 637 RRGLPRKHKKKVGSGGTHREAQITSEVNRPECVFLSTPPRNTC 509
R LP+ H+ + ++ +T E N PECV LS+ TC
Sbjct: 22 RTSLPKIHRPP-----SSKKTTLTEEGNNPECVELSSSYSKTC 59
>SB_48330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 564 LVIWASRWVPPEPTFFLCFRGNPLRNLATXPRSSA 668
+V+ +RW P+P +F RG+PLR T PR ++
Sbjct: 451 IVLPCTRWTVPQPAYFHS-RGSPLR---TTPRGTS 481
>SB_11510| Best HMM Match : MGDG_synth (HMM E-Value=5.3)
Length = 368
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -3
Query: 532 STPPRNTCCYLSLKGEVERLGREVPDDVGEVTTPE*KETLLLGD 401
STP T C+ G R+G+ + + G +TTPE K+ L GD
Sbjct: 144 STPKLRTHCHPYTSG---RIGQYLEQNDGWLTTPELKDQLDSGD 184
>SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +2
Query: 197 DHIIEQNVEPRRSGRVR*GLLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK 376
DH + + R G R ++ G +A + A E + + + VQ V K+ Y
Sbjct: 97 DHTSWELLAQNRQGWRR--VIRNGAAACEANWTAAAEELITVRMVVQFVGKEAI----YT 150
Query: 377 GIVDAFVRIPKEQGLLSFWRG 439
G+ + I E G+L F+ G
Sbjct: 151 GLTSSIKEIYNEHGILGFFAG 171
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 50 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 193
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_17269| Best HMM Match : RRM_1 (HMM E-Value=8.2)
Length = 157
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 8/42 (19%)
Frame = -1
Query: 597 PAAPTGRPRLPAKLTAQN--------ASSCQHRRGTPAVTCP 496
P PT P +P +T+ N SSC+ RRG P+V P
Sbjct: 90 PLPPTFSPTIPPIITSSNFHTTATDGRSSCRSRRGKPSVQHP 131
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,903,280
Number of Sequences: 59808
Number of extensions: 513603
Number of successful extensions: 1860
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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