Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060275.seq
(693 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 145 3e-37
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 145 3e-37
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 4.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 4.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.4
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 145 bits (352), Expect = 3e-37
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
LAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WR
Sbjct: 15 LAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 437 GNFANVIRYFPTQALNFAFQ 496
GN ANVIRYFPTQALNFAF+
Sbjct: 75 GNLANVIRYFPTQALNFAFK 94
Score = 32.3 bits (70), Expect = 0.005
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 492 FKDK*QQVFLGGVDKKT 542
FKDK +QVFLGGVDK T
Sbjct: 93 FKDKYKQVFLGGVDKNT 109
Score = 29.1 bits (62), Expect = 0.042
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVA---PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 424
L++ GI+ V+ A P + V+ + +Q S + ++ YK + + I K +G
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGN 270
Query: 425 SFWRGNFANVIR 460
+F++G F+N++R
Sbjct: 271 AFFKGAFSNILR 282
Score = 27.9 bits (59), Expect = 0.097
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 216 MSNLADPVAFAKD 254
MS LADPVAFAKD
Sbjct: 1 MSGLADPVAFAKD 13
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 145 bits (352), Expect = 3e-37
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = +2
Query: 257 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 436
LAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WR
Sbjct: 15 LAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 437 GNFANVIRYFPTQALNFAFQ 496
GN ANVIRYFPTQALNFAF+
Sbjct: 75 GNLANVIRYFPTQALNFAFK 94
Score = 32.3 bits (70), Expect = 0.005
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 492 FKDK*QQVFLGGVDKKT 542
FKDK +QVFLGGVDK T
Sbjct: 93 FKDKYKQVFLGGVDKNT 109
Score = 29.1 bits (62), Expect = 0.042
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 254 LLAGGISAAVSKTAVA---PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 424
L++ GI+ V+ A P + V+ + +Q S + ++ YK + + I K +G
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGN 270
Query: 425 SFWRGNFANVIR 460
+F++G F+N++R
Sbjct: 271 AFFKGAFSNILR 282
Score = 27.9 bits (59), Expect = 0.097
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 216 MSNLADPVAFAKD 254
MS LADPVAFAKD
Sbjct: 1 MSGLADPVAFAKD 13
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 481 ERLGREVPDDVGEVTTPE 428
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 481 ERLGREVPDDVGEVTTPE 428
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -3
Query: 568 TSEVNRPECVFLSTPP-RNTCCYLSLKGEV 482
T+ + RP+ F+ PP C Y EV
Sbjct: 146 TAVITRPDTKFIQLPPLYEMCPYFFFNSEV 175
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -3
Query: 568 TSEVNRPECVFLSTPP-RNTCCYLSLKGEV 482
T+ + RP+ F+ PP C Y EV
Sbjct: 146 TAVITRPDTKFIQLPPLYEMCPYFFFNSEV 175
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.4
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -1
Query: 624 HESTRRRLAPAAPTG 580
H+ ++++L+PA P G
Sbjct: 267 HQISKKKLSPATPKG 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,090
Number of Sequences: 438
Number of extensions: 4542
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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