Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060274.seq
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   142   5e-34
AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   142   5e-34
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   142   5e-34
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   142   5e-34
AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-P...    31   1.4  
AB043038-1|BAB32536.1|  195|Drosophila melanogaster alpha-amylas...    30   2.5  
BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p pro...    29   4.3  
AY268068-1|AAQ56704.1|  591|Drosophila melanogaster UDP-GalNAc:p...    29   4.3  
AF493067-1|AAM62412.1|  591|Drosophila melanogaster UDP-N-acetyl...    29   4.3  
AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB...    29   4.3  
AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA...    29   4.3  
BT030144-1|ABN49283.1|  104|Drosophila melanogaster IP17595p pro...    29   5.7  
AY119045-1|AAM50905.1|   83|Drosophila melanogaster LP06586p pro...    29   5.7  
AE014297-2570|AAF55586.4|   83|Drosophila melanogaster CG7710-PA...    29   5.7  

>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  142 bits (343), Expect = 5e-34
 Identities = 73/126 (57%), Positives = 81/126 (64%)
 Frame = +1

Query: 256 GDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKR 435
           GDTV+LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKR
Sbjct: 51  GDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKR 110

Query: 436 VHILPIDDSVEGLTGNLFEVYLKPSSWRLTVRSIVTTPSWSAGACAPSSSKWSETDPSPF 615
           V ILPID+S EG+TGNLFE+YLKP   R      +        A  P   K   TDP P+
Sbjct: 111 VRILPIDESTEGVTGNLFEIYLKPYFPRGLSAIHMGDNFIVRAAMRPIEFKVVLTDPEPY 170

Query: 616 CIVAXD 633
           CIVA +
Sbjct: 171 CIVAPE 176



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/50 (78%), Positives = 47/50 (94%)
 Frame = +2

Query: 104 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLF 253
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLF
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLF 49


>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  142 bits (343), Expect = 5e-34
 Identities = 74/127 (58%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
 Frame = +1

Query: 256 GDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKR 435
           GDTV+LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKR
Sbjct: 51  GDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKR 110

Query: 436 VHILPIDDSVEGLTGNLFEVYLKPSSWRLTVRSIVTTPSWSA-GACAPSSSKWSETDPSP 612
           V ILPID+S EG+TGNLFE+YLKP  +    R I    ++    A  P   K   TDP P
Sbjct: 111 VRILPIDESTEGVTGNLFEIYLKP-YFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEP 169

Query: 613 FCIVAXD 633
           +CIVA +
Sbjct: 170 YCIVAPE 176



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/50 (78%), Positives = 47/50 (94%)
 Frame = +2

Query: 104 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLF 253
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLF
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLF 49


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  142 bits (343), Expect = 5e-34
 Identities = 74/127 (58%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
 Frame = +1

Query: 256 GDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKR 435
           GDTV+LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKR
Sbjct: 51  GDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKR 110

Query: 436 VHILPIDDSVEGLTGNLFEVYLKPSSWRLTVRSIVTTPSWSA-GACAPSSSKWSETDPSP 612
           V ILPID+S EG+TGNLFE+YLKP  +    R I    ++    A  P   K   TDP P
Sbjct: 111 VRILPIDESTEGVTGNLFEIYLKP-YFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEP 169

Query: 613 FCIVAXD 633
           +CIVA +
Sbjct: 170 YCIVAPE 176



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/50 (78%), Positives = 47/50 (94%)
 Frame = +2

Query: 104 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLF 253
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLF
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLF 49


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  142 bits (343), Expect = 5e-34
 Identities = 74/127 (58%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
 Frame = +1

Query: 256 GDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKR 435
           GDTV+LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKR
Sbjct: 51  GDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKR 110

Query: 436 VHILPIDDSVEGLTGNLFEVYLKPSSWRLTVRSIVTTPSWSA-GACAPSSSKWSETDPSP 612
           V ILPID+S EG+TGNLFE+YLKP  +    R I    ++    A  P   K   TDP P
Sbjct: 111 VRILPIDESTEGVTGNLFEIYLKP-YFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEP 169

Query: 613 FCIVAXD 633
           +CIVA +
Sbjct: 170 YCIVAPE 176



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/50 (78%), Positives = 47/50 (94%)
 Frame = +2

Query: 104 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLF 253
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLF
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLF 49


>AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-PA
           protein.
          Length = 618

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +2

Query: 287 ARKPFASCSQTIIALMRKFG*TVL*ETTFVCVFLMWYPSLRVLQ*NMENESTYCQLMIQL 466
           A+ P  +C +++      F  T+      V    +  P    L  N+ NES  C  +IQL
Sbjct: 434 AKCPDQNCQESLFMYNISFHLTIKHNNWLVKHLELNTPYTFQLDLNVTNESVKCHAVIQL 493

Query: 467 RVLLAIYSKY 496
           + +L  YSKY
Sbjct: 494 QNVLLEYSKY 503


>AB043038-1|BAB32536.1|  195|Drosophila melanogaster alpha-amylase
           protein.
          Length = 195

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
 Frame = +1

Query: 505 PSSWRLTVRSIVTTPSWSAGA----CAP----SSSKWSETDPSPFCIVAXDP 636
           P+SWR    +  ++P+WS+ A    CAP    SS+ W  T+ +P  + A  P
Sbjct: 85  PTSWRPAPETRSSSPAWSSAATPSECAPTWTWSSTTWPPTE-APTALAAAPP 135


>BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 454 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 290
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AY268068-1|AAQ56704.1|  591|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 454 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 290
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AF493067-1|AAM62412.1|  591|Drosophila melanogaster
           UDP-N-acetylgalactosamine:
           polypeptideN-acetylgalactosaminyltransferase 2 protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 454 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 290
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB,
           isoform B protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 454 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 290
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA,
           isoform A protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 454 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 290
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>BT030144-1|ABN49283.1|  104|Drosophila melanogaster IP17595p
           protein.
          Length = 104

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 517 RLTVRSI-VTTPSWSAGACAPSSSKWSETDPSP 612
           RLT  S   TTPSWS+   A S    S + P+P
Sbjct: 60  RLTTSSARTTTPSWSSSRTASSGRSGSGSSPTP 92


>AY119045-1|AAM50905.1|   83|Drosophila melanogaster LP06586p
           protein.
          Length = 83

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 517 RLTVRSI-VTTPSWSAGACAPSSSKWSETDPSP 612
           RLT  S   TTPSWS+   A S    S + P+P
Sbjct: 39  RLTTSSARTTTPSWSSSRTASSGRSGSGSSPTP 71


>AE014297-2570|AAF55586.4|   83|Drosophila melanogaster CG7710-PA
           protein.
          Length = 83

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 517 RLTVRSI-VTTPSWSAGACAPSSSKWSETDPSP 612
           RLT  S   TTPSWS+   A S    S + P+P
Sbjct: 39  RLTTSSARTTTPSWSSSRTASSGRSGSGSSPTP 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,893,968
Number of Sequences: 53049
Number of extensions: 657644
Number of successful extensions: 1920
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)