Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060273.seq
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    24   0.89 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.3  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   8.3  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -1

Query: 508 PETFFISSSKHFFQVLVPTHQF 443
           P+TFF++  + +F +   +++F
Sbjct: 125 PDTFFVNEKQSYFHIATTSNEF 146


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 198 LVQGLERAGGDLDAAYKYLTRPDQNST 278
           L++G+ERA       +K LT P Q ST
Sbjct: 336 LLKGIERADSVTWNPHKLLTAPQQCST 362


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = +3

Query: 471 KKC---FEEEMKKVSGYLKGFXPXTAASKLGAH 560
           KKC   FEE  +   GY K +   +   KLG H
Sbjct: 407 KKCLELFEELAEDKDGYKKFYEQFSKNIKLGIH 439


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 90  ILILTGYVGAFYSFCEFSR 34
           I +LT  +G ++  CEFSR
Sbjct: 452 ITLLT--IGLYFQLCEFSR 468


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 123 LSGQRIKTRKRDEKEKYDPNGFRD 194
           +SG         + EKYDP  F D
Sbjct: 393 ISGLHYDPEYYPDPEKYDPERFSD 416


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 468 WKKCFEEEMKK 500
           WKKCF   +K+
Sbjct: 174 WKKCFNIRLKR 184


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 459 YRRISFTNTCSKFRMVSISSLAEKMQVLVL 370
           + R+  TNTCS  +   + S   K Q  +L
Sbjct: 121 FSRVKLTNTCSPPQGQLVLSSMHKYQPRIL 150


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 135 RIKTRKRDEKEKY 173
           R K ++RDE+E+Y
Sbjct: 403 RHKQKRRDERERY 415


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 379 VGLGRFAVHRH 347
           VG+G+F VHR+
Sbjct: 88  VGIGQFLVHRN 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,607
Number of Sequences: 336
Number of extensions: 3278
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)