Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060273.seq
(619 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 131 6e-31
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 131 6e-31
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 131 6e-31
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 131 6e-31
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 131 6e-31
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 131 6e-31
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 131 6e-31
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 131 6e-31
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 131 6e-31
Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein. 31 1.2
M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein p... 31 1.2
D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein. 31 1.2
BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p pro... 31 1.2
AY060680-1|AAL28228.1| 598|Drosophila melanogaster GH11848p pro... 31 1.2
AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain ... 31 1.2
AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-P... 31 1.2
AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-P... 31 1.2
AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-P... 31 1.2
U36583-1|AAA87038.1| 401|Drosophila melanogaster Mei-S332 protein. 30 2.2
AY058633-1|AAL13862.1| 401|Drosophila melanogaster LD33081p pro... 30 2.2
AE013599-3339|AAF46802.1| 401|Drosophila melanogaster CG5303-PA... 30 2.2
AE014296-2665|AAF49522.2| 345|Drosophila melanogaster CG32154-P... 29 5.0
AY118320-1|AAM48349.1| 696|Drosophila melanogaster LD06204p pro... 28 8.8
AE013599-3865|AAS64768.1| 696|Drosophila melanogaster CG3419-PB... 28 8.8
AE013599-3864|AAF47201.1| 830|Drosophila melanogaster CG3419-PA... 28 8.8
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 131 bits (317), Expect = 6e-31
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +2
Query: 254 NSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQ 433
+SAG+KLDYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQ
Sbjct: 54 DSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQ 113
Query: 434 VFVKLMRRYKYLEKMF 481
VFVKL+RRYKYLEKMF
Sbjct: 114 VFVKLIRRYKYLEKMF 129
Score = 87.8 bits (208), Expect = 1e-17
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +3
Query: 96 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYL 254
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYL 53
>Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein
protein.
Length = 1407
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGSAGHTAL 808
>D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p
protein.
Length = 1374
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AY060680-1|AAL28228.1| 598|Drosophila melanogaster GH11848p
protein.
Length = 598
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 6 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 36
>AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain
transcription factorProspero protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-PD,
isoform D protein.
Length = 1374
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-PC,
isoform C protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-PA,
isoform A protein.
Length = 1535
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 255 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 163
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>U36583-1|AAA87038.1| 401|Drosophila melanogaster Mei-S332 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -2
Query: 348 TEPPGSSRPPAMSTSNMTSP*RR*SSFDPAELGTCRLRRDRHRPAPDPVPER 193
T P S R + TS ++S RR S+ +E+ T R+ DR P P P R
Sbjct: 115 TTRPISPRRSSSVTSTVSSTSRRSSAEVQSEVVTTRIPEDRRANKPTPPPRR 166
>AY058633-1|AAL13862.1| 401|Drosophila melanogaster LD33081p
protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -2
Query: 348 TEPPGSSRPPAMSTSNMTSP*RR*SSFDPAELGTCRLRRDRHRPAPDPVPER 193
T P S R + TS ++S RR S+ +E+ T R+ DR P P P R
Sbjct: 115 TTRPISPRRSSSVTSTVSSTSRRSSAEVQSEVVTTRIPEDRRANKPTPPPRR 166
>AE013599-3339|AAF46802.1| 401|Drosophila melanogaster CG5303-PA
protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -2
Query: 348 TEPPGSSRPPAMSTSNMTSP*RR*SSFDPAELGTCRLRRDRHRPAPDPVPER 193
T P S R + TS ++S RR S+ +E+ T R+ DR P P P R
Sbjct: 115 TTRPISPRRSSSVTSTVSSTSRRSSAEVQSEVVTTRIPEDRRANKPTPPPRR 166
>AE014296-2665|AAF49522.2| 345|Drosophila melanogaster CG32154-PA
protein.
Length = 345
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 323 GLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMRRYKYLEKMFRRGNEKG 502
G+LLPGG+V +D + N + S D +R+ E ++ M R +K+ RG
Sbjct: 77 GILLPGGAVFIDEADRQANPDVTS-----DCVRSAELIYQLAMERNMRAKKLDDRGAYFP 131
Query: 503 FW 508
W
Sbjct: 132 VW 133
>AY118320-1|AAM48349.1| 696|Drosophila melanogaster LD06204p
protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 477 IFSKYLYRRISFTNTCSKFRMVSISSLAEKMQVLVLGDS 361
+F + +Y ISF+N FR+ + L ++++L +G S
Sbjct: 112 VFPRLIYTLISFSNDYCLFRICRLYGLRFEIRLLAMGSS 150
>AE013599-3865|AAS64768.1| 696|Drosophila melanogaster CG3419-PB,
isoform B protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 477 IFSKYLYRRISFTNTCSKFRMVSISSLAEKMQVLVLGDS 361
+F + +Y ISF+N FR+ + L ++++L +G S
Sbjct: 112 VFPRLIYTLISFSNDYCLFRICRLYGLRFEIRLLAMGSS 150
>AE013599-3864|AAF47201.1| 830|Drosophila melanogaster CG3419-PA,
isoform A protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 477 IFSKYLYRRISFTNTCSKFRMVSISSLAEKMQVLVLGDS 361
+F + +Y ISF+N FR+ + L ++++L +G S
Sbjct: 112 VFPRLIYTLISFSNDYCLFRICRLYGLRFEIRLLAMGSS 150
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,684,822
Number of Sequences: 53049
Number of extensions: 679585
Number of successful extensions: 2293
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2293
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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