Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060272.seq
(686 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 168 4e-42
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 166 2e-41
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 143 1e-34
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 3e-34
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 82 5e-16
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 69 4e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.87
SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0) 30 1.5
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.7
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07) 28 6.2
SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.1
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 168 bits (408), Expect = 4e-42
Identities = 79/103 (76%), Positives = 90/103 (87%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD PKI+V YKGE KTF EE+SS
Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISS 121
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
MVL KMKETAEAYLG+ V +AVI VPAYFNDSQRQATKDAGTI
Sbjct: 122 MVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTI 164
Score = 123 bits (296), Expect = 2e-28
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 254 RTP 262
P
Sbjct: 61 LNP 63
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 166 bits (403), Expect = 2e-41
Identities = 76/103 (73%), Positives = 87/103 (84%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
NP NT+FDAKRLIGRKF+D V DM HWPF V+ +G PKI+V +KGE K+FFPEE+SS
Sbjct: 62 NPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISS 121
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
MVLTKMKETAEAYLG V +AV+ VPAYF+DSQRQATKDAGTI
Sbjct: 122 MVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTI 164
Score = 127 bits (306), Expect = 1e-29
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 254 RTP 262
P
Sbjct: 61 MNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 143 bits (346), Expect = 1e-34
Identities = 68/103 (66%), Positives = 82/103 (79%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV P ++V K E KTF EE+S+
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
MVLTKMKETAEAYLGK V +AV+ VPAYFND+QRQATKDAG I
Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAI 862
Score = 98.7 bits (235), Expect = 4e-21
Identities = 77/197 (39%), Positives = 105/197 (53%), Gaps = 9/197 (4%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVARTPTT 268
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP-- 761
Query: 269 QYSMPNVSSDVSSKMLLCKPT*STGLSR------LSVMEDNLRSR*HIRVK--TKPFSPR 424
N D +K L+ + T + V++ N + ++VK K F+
Sbjct: 762 ----ENTVFD--AKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAE 815
Query: 425 KSVPWCLRK*RKLPKLISAKLCRMQLFTFPRTSMTLKDKPQKMQVPSSGLKTFLRIINXT 604
+ L K ++ + K + T P + + K +GL T +RIIN
Sbjct: 816 EISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGL-TVMRIIN-E 873
Query: 605 PLAAAIWL*RVLDQKKG 655
P AAAI +D+K+G
Sbjct: 874 PTAAAIAY--GMDKKEG 888
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 142 bits (343), Expect = 3e-34
Identities = 79/130 (60%), Positives = 87/130 (66%), Gaps = 25/130 (19%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEV-- 429
NP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G PK+KV YKGE KTFF EEV
Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVN 121
Query: 430 -----------------------SSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQ 540
SSMVL KMKETAEAYLG V +AV+ VPAYFNDSQRQ
Sbjct: 122 EAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQ 181
Query: 541 ATKDAGTIFR 570
ATKDAG R
Sbjct: 182 ATKDAGESVR 191
Score = 127 bits (307), Expect = 7e-30
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 254 RTPT 265
PT
Sbjct: 61 MNPT 64
Score = 77.8 bits (183), Expect = 8e-15
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 424 EVSSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
++SSMVL KMKETAEAYLG V +AV+ VPAYFNDSQRQATKDAG I
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVI 257
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGG*PKIKVAYKGEDKTFFPEEVS 432
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 433 SMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDA 555
+M+ T++K TAE L V + VI VP+Y+ D QR+ DA
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDA 218
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 247
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +1
Query: 379 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAG 558
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVI VPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 559 TIFRLENVSPNHQXNP 606
TI L+ +S P
Sbjct: 62 TIAGLDVLSRTASERP 77
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 68.9 bits (161), Expect = 4e-12
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-G*PKIKVAYKGEDKTFFPEEVS 432
NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 91 NPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIG 150
Query: 433 SMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
V+ K++ AE L TV AV+ VPA F+ QR AT A ++
Sbjct: 151 GYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASL 194
Score = 61.3 bits (142), Expect = 7e-10
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 254 RTP 262
P
Sbjct: 90 INP 92
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 373 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKD 552
P +K Y+ D TF PEE+ M+L + E + +++ V+ VP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 553 AGTIFRL 573
A + L
Sbjct: 127 AAELVGL 133
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 143 GKVEIIANDQGNRTTPSYVAFTDTERLI 226
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 152 EIIANDQGNRTTPSYVAFT-DTERL 223
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 939
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 684 KLPFSVPPKLPFFWSKTR*SQIAAASGVXLMIRRNVFKPE 565
K PF + P +PF+ K R S I + S ++ R V+K E
Sbjct: 839 KTPFGLEPDVPFWSYKHRASSICSDSEFSVVTNRKVYKME 878
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 61 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 237
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 238 QEPGGENPNNTIFDA 282
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 20 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 106
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
Length = 507
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 426 SQFHGAYENEGNCRSLSRQNCAECSYSRSRVLQ 524
S H + N NC+ +C +C SRSR+ Q
Sbjct: 139 SDNHAKHRNASNCKD---NSCLQCEESRSRITQ 168
>SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = -3
Query: 321 HSSIFELTSDETFGIEYCVVGVLATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFP 142
+S + L + T +EY +GVLATW R + V AT L W L +++T
Sbjct: 23 YSRLGVLATWSTGDLEYWRLGVLATWSTGDLEYSR-LGVLATWSTGDLEYWRLGVLAT-- 79
Query: 141 CWKTPTQEY 115
W T EY
Sbjct: 80 -WSTGDLEY 87
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 467 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGYPPSLTTSKGQCFMSACTVASSNLRPMR 288
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 287 RLASNIVL 264
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 201 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 326
R+ P S+ PP RW+ P Q QT H R Y S
Sbjct: 37 RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,236,152
Number of Sequences: 59808
Number of extensions: 567539
Number of successful extensions: 1714
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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