Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060272.seq
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 168 4e-42
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 161 3e-40
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 155 4e-38
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 155 4e-38
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 153 9e-38
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 153 9e-38
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 148 3e-36
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 145 3e-35
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 111 6e-25
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 107 6e-24
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 90 2e-18
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 90 2e-18
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 77 2e-14
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 71 8e-13
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 31 0.58
Z81119-6|CAB03337.2| 401|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 29 2.4
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 28 5.4
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 28 5.4
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 5.4
AF078792-4|AAN84813.1| 261|Caenorhabditis elegans Hypothetical ... 27 9.5
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 168 bits (408), Expect = 4e-42
Identities = 77/104 (74%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGG*PKIKVAYKGEDKTFFPEEVS 432
NP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G PK++V YKGE+K F PEE+S
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 433 SMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
SMVL KMKETAEA+LG TV++AV+ VPAYFNDSQRQATKDAG I
Sbjct: 122 SMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAI 165
Score = 121 bits (291), Expect = 6e-28
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 254 RTP 262
P
Sbjct: 61 MNP 63
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 161 bits (392), Expect = 3e-40
Identities = 74/104 (71%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGG*PKIKVAYKGEDKTFFPEEVS 432
NP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G PK++V YKGE+K F PEE+S
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 433 SMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
SMVL KMK+TAEA+L TV++AV+ VP YFNDSQRQATKDAG I
Sbjct: 122 SMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAI 165
Score = 121 bits (291), Expect = 6e-28
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 254 RTP 262
P
Sbjct: 61 MNP 63
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 155 bits (375), Expect = 4e-38
Identities = 73/115 (63%), Positives = 88/115 (76%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V G P I+V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLENV 582
PEE+S+MVL KMKETAE YLG TV++AVI VPAYFNDSQRQATKDA TI L +
Sbjct: 116 PEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAI 170
Score = 110 bits (264), Expect = 1e-24
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP 262
R P
Sbjct: 61 RNP 63
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 155 bits (375), Expect = 4e-38
Identities = 73/115 (63%), Positives = 88/115 (76%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V G P I+V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLENV 582
PEE+S+MVL KMKETAE YLG TV++AVI VPAYFNDSQRQATKDA TI L +
Sbjct: 116 PEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAI 170
Score = 110 bits (264), Expect = 1e-24
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP 262
R P
Sbjct: 61 RNP 63
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 153 bits (372), Expect = 9e-38
Identities = 72/109 (66%), Positives = 85/109 (77%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ P ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLENV 582
MVL KMKE AE+YLGK V+NAV+ VPAYFND+QRQATKDAGTI L V
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVV 201
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/59 (72%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP 262
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 153 bits (372), Expect = 9e-38
Identities = 72/109 (66%), Positives = 85/109 (77%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ P ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLENV 582
MVL KMKE AE+YLGK V+NAV+ VPAYFND+QRQATKDAGTI L V
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVV 201
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/59 (72%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP 262
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 148 bits (359), Expect = 3e-36
Identities = 70/115 (60%), Positives = 87/115 (75%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V G P ++V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLENV 582
EE+S+MVL KMKETAEA LG +V++AVI VPAYFNDSQRQATKDA TI L +
Sbjct: 116 AEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAI 170
Score = 109 bits (263), Expect = 1e-24
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP 262
R P
Sbjct: 61 RNP 63
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 145 bits (351), Expect = 3e-35
Identities = 68/109 (62%), Positives = 83/109 (76%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + + TVQ D+KHWPF++V P ++V E K F PEEVS+
Sbjct: 90 NPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLENV 582
MVLTKMK+ AE+YLG V+NAV+ VPAYFND+Q+QATKDAG+I L V
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVV 198
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP 262
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 111 bits (266), Expect = 6e-25
Identities = 56/103 (54%), Positives = 70/103 (67%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
N NT+F KRLIGR++ED VQ D+K P+++V + + K + P +V +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGD---AWVEAQGKVYSPSQVGA 146
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
VL KMKETAE+YLG TV NAV+ VPAYFNDSQRQATKDAG I
Sbjct: 147 FVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQI 189
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 107 bits (258), Expect = 6e-24
Identities = 55/103 (53%), Positives = 69/103 (66%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSS 435
N NT+F KRLIGR++ED VQ D+K P+++V + + K + P +V +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGD---AWVEAQGKEYPPSQVGA 146
Query: 436 MVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
VL KMKETAE+YLG TV N V+ VPAYFNDSQRQATKDAG I
Sbjct: 147 FVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQI 189
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = +1
Query: 265 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GG*PKIKVAYKGEDKTFFPEEVSSMV 441
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 442 LTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLE 576
L +K AE LG V++AVI VPAYFN +QR+AT++A I L+
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVARTPT 265
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 266 TQYSMPNV 289
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = +1
Query: 265 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GG*PKIKVAYKGEDKTFFPEEVSSMV 441
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 442 LTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLE 576
L +K AE LG V++AVI VPAYFN +QR+AT++A I L+
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVARTPT 265
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 266 TQYSMPNV 289
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-G*PKIKVAYKGEDKTFFPEE 426
NP TI+DAKR IGR FE + +D K +PF++ D G ++ K +PEE
Sbjct: 94 NPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEE 153
Query: 427 VSSMVLTKMKETAEAYLGKTVQNAVIHVPAYFNDSQRQATKDAGTIFRLE 576
+ S+++ +K A +LG T+ VI PA FN+ QR T A I +E
Sbjct: 154 IGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAEME 203
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 65 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 229
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 230 DAAKNQVARTP 262
A Q P
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 70.9 bits (166), Expect = 8e-13
Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Frame = +1
Query: 139 AREGGDHRQRPGQQDHSVLCCVH---RHRASHRRCRQEPGGENPNNTIFDAKRLIGRKFE 309
AR+GG H+ CV + R+ RQ N NT+ + K LIGRKF
Sbjct: 18 ARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVT-TNIKNTVINFKHLIGRKFS 76
Query: 310 DATVQADMKHWPFEVVS-DGG*PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLG-- 480
D Q + P +VV ++V+Y GE TF PE+V + +LTK++ E+ L
Sbjct: 77 DPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLTKLRTIVESQLSDV 136
Query: 481 KTVQNAVIHVPAYFNDSQRQATKDA 555
K V + V+ VP+YF D QR+A A
Sbjct: 137 KKVSDCVLAVPSYFTDVQRRAVLSA 161
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 250
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAV 56
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = +1
Query: 289 LIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 468
+I RK D K +PF K V + +++ + E + +M+L K+ E
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKT-VVFPYKEEKYNVETLLAMILWNAKKVTE 138
Query: 469 AYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
AY +TV++ VI VP + N ++R+A A I
Sbjct: 139 AYADQTVKDVVITVPIFLNQAERRAIASAAEI 170
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = +1
Query: 289 LIGRKFEDATVQADMKHWPFEVVSDGG*PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 468
+I RK D K +PF K V + +++ + E + +M+L K+ E
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKT-VVFPYKEEKYNVETLLAMILWNAKKVTE 154
Query: 469 AYLGKTVQNAVIHVPAYFNDSQRQATKDAGTI 564
AY +TV++ VI VP + N ++R+A A I
Sbjct: 155 AYADQTVKDVVITVPIFLNQAERRAIASAAEI 186
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA R P
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYP 84
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 268 CCWGSRHLVLGGISDETLGVCERNIRRSGPVA 173
CC G+ H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>Z81119-6|CAB03337.2| 401|Caenorhabditis elegans Hypothetical
protein T10H4.8 protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 455 RKLPKLISAKLCRMQLFTFPRTSMTLKDKPQKMQVPS 565
RK + KL +F F TSM+LKDK +K+ P+
Sbjct: 365 RKKSFSLEIKLYFQNIFVFSTTSMSLKDKNKKITKPN 401
>Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical
protein F52B5.5a protein.
Length = 644
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -3
Query: 516 RGNVNNCILHSFAE--ISFGSFLHFRK-HHGTDFLGEKGFVFTLICY 385
R +V C H+ E F SF + R H + EKG FTLI Y
Sbjct: 301 RSDVMKCRSHTEREQHFPFDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
>AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription
factor CEP-1 protein.
Length = 644
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -3
Query: 516 RGNVNNCILHSFAE--ISFGSFLHFRK-HHGTDFLGEKGFVFTLICY 385
R +V C H+ E F SF + R H + EKG FTLI Y
Sbjct: 301 RSDVMKCRSHTEREQHFPFDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 205 HRHRASHRR--CRQEPGGENPNNTIFDAKRLIGR-KFEDATVQADM 333
H+HR SHR Q+ G+ NN + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 381 DLRLSSITDNLERPVLHVGLHSSIFELTSDETFGIEY 271
DLR SS L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 144 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 245
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>AF078792-4|AAN84813.1| 261|Caenorhabditis elegans Hypothetical
protein Y40D12A.1b protein.
Length = 261
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/75 (22%), Positives = 27/75 (36%)
Frame = +1
Query: 169 PGQQDHSVLCCVHRHRASHRRCRQEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPF 348
PG +V + R R + G N N F+ + + +D+ ++ M W F
Sbjct: 131 PGYFIEAVHVALMRSRGKNEEMSYWKWGANTLNPYFENRSCFDKLIDDSHIRPTMDQWYF 190
Query: 349 EVVSDGG*PKIKVAY 393
DG K Y
Sbjct: 191 GPSDDGDIEKFTEEY 205
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/75 (22%), Positives = 27/75 (36%)
Frame = +1
Query: 169 PGQQDHSVLCCVHRHRASHRRCRQEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPF 348
PG +V + R R + G N N F+ + + +D+ ++ M W F
Sbjct: 131 PGYFIEAVHVALMRSRGKNEEMSYWKWGANTLNPYFENRSCFDKLIDDSHIRPTMDQWYF 190
Query: 349 EVVSDGG*PKIKVAY 393
DG K Y
Sbjct: 191 GPSDDGDIEKFTEEY 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,590,453
Number of Sequences: 27780
Number of extensions: 403150
Number of successful extensions: 1204
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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