Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060271.seq
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1214 + 24931142-24932314,24934177-24934434 68 6e-12
03_05_0618 + 26177743-26178420,26179477-26179617 64 1e-10
10_06_0171 + 11466934-11466990,11467073-11468312,11468450-114685... 42 6e-04
04_04_0423 - 25102305-25102489,25102571-25102717,25103079-251031... 39 0.004
02_04_0521 - 23631951-23633810 38 0.007
04_04_1171 - 31455136-31455482,31455805-31458982 36 0.028
06_01_0602 - 4342333-4342790,4342899-4345623 36 0.037
02_04_0595 - 24186714-24186898,24187004-24187150,24187647-241877... 36 0.037
03_01_0640 - 4683970-4684481,4685197-4685343,4685606-4686764,468... 35 0.048
05_01_0498 + 4152729-4152820,4153316-4153425,4153840-4153877,415... 35 0.064
02_01_0090 - 637141-640263 35 0.064
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 34 0.11
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 34 0.11
02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410 34 0.11
03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856 33 0.20
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 33 0.20
08_02_0734 - 20559249-20559868,20560812-20562132 33 0.26
07_03_0486 - 18634813-18635168,18635258-18638726 32 0.34
12_01_0527 - 4177928-4178235,4178849-4181438 32 0.45
11_06_0109 + 20202629-20205452,20206354-20206578,20207208-202080... 32 0.45
05_05_0220 + 23380290-23381581,23381997-23383458 32 0.45
01_07_0231 + 42176598-42178117,42178232-42179753 32 0.45
07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056 31 0.60
06_01_0603 - 4350124-4350590,4350995-4353608 31 0.60
06_01_0601 + 4337575-4340149,4340566-4340978 31 0.60
04_04_0207 + 23602065-23604315,23604611-23605116 31 0.79
11_03_0171 + 11111534-11113207 31 1.0
08_01_1050 - 10649434-10651917 31 1.0
06_01_1112 - 9157776-9158149,9158248-9161158 31 1.0
03_02_0918 + 12381662-12383118,12383249-12384707 31 1.0
03_01_0314 - 2477593-2480685 31 1.0
11_08_0033 + 27820563-27823482,27823593-27823996 30 1.8
11_06_0087 - 19919224-19922304 30 1.8
10_01_0354 - 3887790-3890204 30 1.8
10_01_0316 + 3479574-3482679,3482766-3483127 30 1.8
09_01_0158 + 2332381-2333211 30 1.8
08_01_0917 + 9033451-9036136,9036373-9036722 30 1.8
08_01_0913 + 8995491-8995926,8995976-8997352,8997431-8998174,899... 30 1.8
03_02_0246 - 6772369-6772808,6773223-6775788 30 1.8
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 30 1.8
11_06_0099 + 20070925-20073867 29 2.4
08_02_0293 - 15424397-15428041 29 2.4
08_02_0238 + 14665813-14668798,14669088-14669125 29 2.4
06_03_0615 - 22761375-22761760,22762218-22765026 29 2.4
11_06_0132 - 20431122-20431477,20431739-20433758 29 3.2
11_06_0125 - 20356683-20357071,20359531-20362285 29 3.2
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 29 3.2
02_01_0422 - 3084940-3087072 29 3.2
11_08_0011 + 27612206-27615110,27615211-27615538,27615989-276160... 29 4.2
07_03_1176 + 24567720-24570932 29 4.2
02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722 29 4.2
01_06_0716 - 31425189-31426460 29 4.2
01_06_0664 + 30999365-31002089,31002220-31002686 29 4.2
01_05_0608 - 23628100-23631486 29 4.2
12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160 28 5.6
10_01_0071 - 905696-909028 28 5.6
08_01_0915 + 9019499-9020971 28 5.6
06_03_0592 + 22585546-22588573,22588680-22589032 28 5.6
08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350 28 7.4
08_02_0843 - 21759183-21759556,21760255-21762913 28 7.4
08_02_0192 + 14048828-14048873,14048960-14051169 28 7.4
04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925 28 7.4
03_02_0134 + 5820068-5820178,5822439-5822508,5822893-5822939,582... 28 7.4
11_06_0445 - 23679918-23680282,23680415-23683349 27 9.7
11_01_0627 - 5047751-5047758,5047799-5048015,5048759-5049646 27 9.7
10_08_0247 - 16151969-16152091,16152599-16152718,16153480-161535... 27 9.7
06_03_0613 + 22748223-22749513,22750046-22750179,22751066-227513... 27 9.7
04_04_1371 + 32995337-32995358,32995745-32995822,32995876-329960... 27 9.7
>07_03_1214 + 24931142-24932314,24934177-24934434
Length = 476
Score = 68.1 bits (159), Expect = 6e-12
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFL--SGCKKLAHLNLSGNKIKDLETLKPLEAXXXXXXXXXXXXX 433
L +L LSDNRI+ GL L +G L L+LS N+I+D+ L PL A
Sbjct: 74 LTRLTLSDNRIAGGLDHLVAAGLASLRDLDLSNNRIQDVGDLSPL-ANLRLVSLDLYECP 132
Query: 434 VTSIEDYKSKVFAMHPSLKYLDGFDSXTKKLMTVDIEEEDEMNGNND 574
VT ++DY+SKVF M +LKYLD D+ + D +++D+ +G+ D
Sbjct: 133 VTRVKDYRSKVFGMIRTLKYLDKMDADENERPESD-DDDDDGDGDGD 178
>03_05_0618 + 26177743-26178420,26179477-26179617
Length = 272
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKK----LAHLNLSGNKIKDLETLKPLEAXXXXXXXXXXX 427
LR+L L DNR+S + + + L HL+L N+ D+ L PL A
Sbjct: 80 LRRLSLPDNRLSGAASLAAVAESCGATLRHLDLGNNRFADVAELAPL-APHGVESLDLYQ 138
Query: 428 XXVTSIEDYKSKVFAMHPSLKYLDGFDSXTKKLMTVDIEEEDEMNGNNDSG*G 586
VT + Y+ KVFA+ PSLK+LDG D+ + D +EEDE + G G
Sbjct: 139 CPVTKAKGYRDKVFALIPSLKFLDGMDAEGNDCLDSD-DEEDEEEDEGEEGEG 190
>10_06_0171 +
11466934-11466990,11467073-11468312,11468450-11468596,
11469650-11470140
Length = 644
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +2
Query: 230 NTQRFSDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPL 388
N + + LR L LS NRIS LSGC L L L+GNKI D+E L L
Sbjct: 456 NIEGLRELTKLRVLNLSYNRISRIGHGLSGCTALRELYLAGNKISDVEGLHRL 508
>04_04_0423 -
25102305-25102489,25102571-25102717,25103079-25103150,
25103305-25103327,25103792-25103863,25104064-25104112,
25104344-25104415,25104880-25104951,25105281-25105352,
25106569-25106640,25106810-25106881,25106974-25107048,
25107324-25107470,25107598-25107805,25108361-25108489,
25108563-25108769
Length = 557
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 236 QRFSDAAMLRKLELSDNRISN-GLTFLSGCKKLAHLNLSG 352
+ SD LR+L+LS +IS+ G+++L G KLAHLNL G
Sbjct: 252 KHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEG 291
>02_04_0521 - 23631951-23633810
Length = 619
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
L+ L+LS+NRIS + L+GC+ L +NLSGNKI
Sbjct: 302 LKVLDLSNNRISGEIPLPLAGCRSLEVVNLSGNKI 336
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
L+ L+LS NR+S + L+GC +L +L L GN +
Sbjct: 254 LQALDLSRNRLSGVVPAGLAGCFQLLYLRLGGNHL 288
>04_04_1171 - 31455136-31455482,31455805-31458982
Length = 1174
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/36 (44%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 257 MLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
M++ ++LS+N++S G+ L+GCK L L+LSGN +
Sbjct: 644 MVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSL 679
>06_01_0602 - 4342333-4342790,4342899-4345623
Length = 1060
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKIK 364
AML+ L LS NR+S + T + GC L ++N+SGN ++
Sbjct: 515 AMLQVLNLSSNRLSGDIPTQIGGCVALEYVNVSGNALE 552
>02_04_0595 -
24186714-24186898,24187004-24187150,24187647-24187718,
24188061-24188204,24188769-24188840,24189233-24189304,
24189805-24189876,24190214-24190285,24190416-24190487,
24190685-24190756,24190957-24191031,24191226-24191372,
24191670-24191877,24192240-24192368,24192454-24192663
Length = 582
Score = 35.5 bits (78), Expect = 0.037
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 200 NTES*QCGSHNTQRFSDAAMLRKLELSDNRI-SNGLTFLSGCKKLAHLNLSGNKIKD 367
N +S + G +L+ LELSD + S+GL LSG + L +NLS + D
Sbjct: 361 NLDSCKVGDEGLLHLRGLMLLKSLELSDTEVGSSGLQHLSGLRNLESINLSFTLVTD 417
>03_01_0640 -
4683970-4684481,4685197-4685343,4685606-4686764,
4686851-4686907
Length = 624
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPL 388
LR L LS N+IS LS C + L L+GNKI D+E L L
Sbjct: 439 LRVLNLSYNKISRIGHGLSNCGAIRELYLAGNKISDVEGLHRL 481
>05_01_0498 +
4152729-4152820,4153316-4153425,4153840-4153877,
4154335-4154433,4154461-4157475
Length = 1117
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
D L+ L+LS+N S + LS C +L HLNL GN +
Sbjct: 759 DLTELKILDLSNNNFSGDIPPELSNCSRLTHLNLDGNSL 797
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
L +L+LS N ++ G+ L GC L L+LSGN++
Sbjct: 811 LGELDLSSNALTGGIPVELGGCSGLLKLSLSGNRL 845
>02_01_0090 - 637141-640263
Length = 1040
Score = 34.7 bits (76), Expect = 0.064
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 239 RFSDAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
+F D L L+LS+NR++ + + L+ C++L LNL NK+
Sbjct: 499 QFQDCPALAALDLSNNRLAGAIPSSLASCQRLVKLNLRRNKL 540
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPL 388
LR L++S NRIS L+ C L L L GNKI +++ L L
Sbjct: 599 LRLLDISYNRISRIGHGLASCSSLKELYLGGNKISEVDGLHRL 641
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPLE 391
+ +LR L+LS NRI+ L+ C L L + GNKI ++E L L+
Sbjct: 390 ELTLLRVLDLSYNRITKIGHGLASCPFLKELYIGGNKISEVEGLHRLK 437
>02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410
Length = 1044
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 245 SDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKI 361
S+ + L ++ L +N +S GLTF + +L +LNLS N I
Sbjct: 92 SNLSSLARIHLPNNGLSGGLTFTADVARLQYLNLSFNAI 130
>03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856
Length = 1002
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
+R L+L+ NR+ + LS CK L LNLSGN++
Sbjct: 151 MRVLDLASNRLHGEIQGTLSDCKSLMRLNLSGNRL 185
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
L +L S+N IS L+GC KL LNL GNK+ L
Sbjct: 139 LSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTL 175
>08_02_0734 - 20559249-20559868,20560812-20562132
Length = 646
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
LR L L N IS G+ + GC +L LNLSGN++
Sbjct: 98 LRTLSLRMNAISGGIPADIGGCVQLRSLNLSGNRL 132
>07_03_0486 - 18634813-18635168,18635258-18638726
Length = 1274
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
+AA L L+ S N ++ G+ L+ C +L+H+ LSGN++
Sbjct: 635 NAAALTMLDASGNALTGGIPDALARCARLSHIALSGNRL 673
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
L +L LS N ++ + LS C KL L+L GN+I
Sbjct: 687 LGELALSGNELTGPVPVQLSNCSKLIKLSLDGNQI 721
>12_01_0527 - 4177928-4178235,4178849-4181438
Length = 965
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKIK 364
DA+ L LEL N+++ + L CK L+ LNL+ NK +
Sbjct: 373 DASTLAYLELDSNQLTGSIPLELGRCKSLSLLNLASNKFQ 412
>11_06_0109 +
20202629-20205452,20206354-20206578,20207208-20208091,
20208692-20208814
Length = 1351
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKIKDL 370
L+ L LS+NR+S +FL CK+L ++LS NK+ +
Sbjct: 680 LKFLRLSNNRLSGNFPSFLRKCKELHFIDLSWNKLSGI 717
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKI 361
L L++S+N +S L G LAHLNL N+I
Sbjct: 608 LETLDISNNYLSGPLPSNIGAPNLAHLNLYSNQI 641
>05_05_0220 + 23380290-23381581,23381997-23383458
Length = 917
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
+ A L L+LS NR + +SGCK L ++LSGN +
Sbjct: 256 EMAALETLDLSGNRFVGAIPDGISGCKNLVEVDLSGNAL 294
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 263 RKLELSDNRISNGL-TFLSGCKKLAHLNLSGN 355
R L+LS N +S L L+ C L LNLSGN
Sbjct: 117 RALDLSANSLSGYLPAALASCGSLVSLNLSGN 148
>01_07_0231 + 42176598-42178117,42178232-42179753
Length = 1013
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
LR L +S+N++S + +SGC KLA L+L N +
Sbjct: 336 LRYLSMSENQLSGAIPDAMSGCTKLAELHLRANNL 370
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
A +R L LS N+ S L LS L HLNLSGN++
Sbjct: 164 ATVRFLMLSGNQFSGPLPQGLSKSSFLLHLNLSGNQL 200
>07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056
Length = 1109
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRISNGLTF--LSGCKKLAHLNLSGNKI 361
FS L L+LSDN I L L+ C+ L HLNLS N I
Sbjct: 90 FSRLTALTWLDLSDNGIGGELPAGDLAQCRGLVHLNLSHNLI 131
>06_01_0603 - 4350124-4350590,4350995-4353608
Length = 1026
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 257 MLRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKIK 364
M+ L+LS+N ++ + L GC L +LNLSGN ++
Sbjct: 477 MVLALDLSENALAGAVPAQLGGCVALEYLNLSGNALR 513
>06_01_0601 + 4337575-4340149,4340566-4340978
Length = 995
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 227 HNTQRFSDAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKIK 364
H + + M L+LS N +S + ++GC L ++NLSGN ++
Sbjct: 455 HVPLQIGNMEMTEALDLSMNNLSGAIPATIAGCVALEYINLSGNSLQ 501
>04_04_0207 + 23602065-23604315,23604611-23605116
Length = 918
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 179 R*IYKFTNTES*QCGSHNTQRFSDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNK 358
R +Y+FT + + G D+ + + +S N +S + L+ C++L L+LSGN
Sbjct: 375 RTMYRFTASANRLAGGL-PDTLCDSPAMSIINVSGNALSGAIPELTRCRRLVSLSLSGNA 433
Query: 359 I 361
+
Sbjct: 434 L 434
>11_03_0171 + 11111534-11113207
Length = 557
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGN 355
D L+ L+LSDN ++ L L CK+L L LSGN
Sbjct: 141 DLPRLQNLDLSDNSLTGSLPPELRRCKQLQRLMLSGN 177
>08_01_1050 - 10649434-10651917
Length = 827
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK 364
L ++LS N + L LS L++LNLSGN+++
Sbjct: 182 LSSMDLSGNALDGDLPDLSPLLSLSYLNLSGNRLR 216
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGL--TFLSGCKKLAHLNLSGNKIK-DLETLKPL 388
A LR L+ S N L T +SG L+ ++LSGN + DL L PL
Sbjct: 155 AALRVLDASHNLFQGQLLGTVISGWTNLSSMDLSGNALDGDLPDLSPL 202
>06_01_1112 - 9157776-9158149,9158248-9161158
Length = 1094
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKIK 364
FS+ + L+ L++S N IS + +L+ LA+LNLS NK++
Sbjct: 656 FSNLSGLQILDISHNNISGTIPKYLANFTSLANLNLSFNKLE 697
>03_02_0918 + 12381662-12383118,12383249-12384707
Length = 971
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
L++L LS N + GL + GCK L H+++S N +
Sbjct: 317 LKELRLSGNGFTGGLPESIGGCKSLVHVDVSWNSL 351
>03_01_0314 - 2477593-2480685
Length = 1030
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF-LSGCKKLAHLNLSGN 355
LR+L++SDN L C L HLN SGN
Sbjct: 118 LRELDVSDNNFKGRFPAGLGACASLTHLNASGN 150
>11_08_0033 + 27820563-27823482,27823593-27823996
Length = 1107
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 221 GSHNTQRFSDAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKIKDL 370
G+ T + MLRK++L N+ + + + L+ CK L ++L GN +D+
Sbjct: 265 GAIPTNESFNLPMLRKIDLYMNKFTGPIPSGLASCKHLEMISLGGNLFEDV 315
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
D L+ L+LS N S + L+ K L HLNL+GN I
Sbjct: 735 DLVQLQFLQLSYNMFSGNIPNILTKLKLLHHLNLAGNNI 773
>10_01_0354 - 3887790-3890204
Length = 804
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 SQVKELNLDNCRSTNIVGLTDEYTNLQIL-SLNNVGLTTLKGFPTLLCS 263
S ++EL +DNC +++ + L L SL +GL L+ P LCS
Sbjct: 720 SSLRELFIDNCPELDLMHPEEAMDGLWSLRSLQIIGLPKLERLPDTLCS 768
>10_01_0316 + 3479574-3482679,3482766-3483127
Length = 1155
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGLTF-LSGCKKLAHLNLSGN 355
++L L +S NR++ + L CK+LAHL+L N
Sbjct: 601 SILDTLLMSSNRLTGAIPHELGNCKRLAHLDLGNN 635
>09_01_0158 + 2332381-2333211
Length = 276
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 245 SDAAMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
S+ L+ L+LS N +S + LSG LA LNLS N++
Sbjct: 96 SNCTNLQSLDLSSNALSGAIPPELSGLLNLAVLNLSANRL 135
>08_01_0917 + 9033451-9036136,9036373-9036722
Length = 1011
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
LR L+LS N + + L GC+KL LNLS N +
Sbjct: 103 LRVLDLSANSLDGDIPASLGGCRKLRTLNLSTNHL 137
>08_01_0913 +
8995491-8995926,8995976-8997352,8997431-8998174,
8998402-8998748
Length = 967
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 233 TQRFSDAAMLRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
+Q+ + LR L+LS N + + L GC KL +NLS N +
Sbjct: 101 SQQLGNLTHLRVLDLSTNSLDGDIPISLGGCPKLHAMNLSMNHL 144
>03_02_0246 - 6772369-6772808,6773223-6775788
Length = 1001
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
L K +LS N IS + ++GC+ L L+LSGN++
Sbjct: 494 LSKADLSGNLISGEIPPAIAGCRLLTFLDLSGNRL 528
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKIKDL 370
L + + S N IS + T + CK L LN+SGN ++ +
Sbjct: 641 LGEFDFSSNNISGEIPTSIGECKSLQQLNISGNSLQGI 678
>11_06_0099 + 20070925-20073867
Length = 980
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 269 LELSDNRISNGLTFLSGCKKLAHLNLSGNKI 361
L+LS+N +S L G KLA LNL N+I
Sbjct: 561 LDLSNNSLSGPLPLNIGSPKLAELNLLSNRI 591
>08_02_0293 - 15424397-15428041
Length = 1214
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 260 LRKLELSDNRISNG--LTF-LSGCKKLAHLNLSGNK 358
LR+L++S N++S+ L + L+GC + +LNLS N+
Sbjct: 180 LRRLDMSRNQLSDAGLLNYSLTGCHGIQYLNLSANQ 215
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRI-SNGLT-FLSGCKKLAHLNLSGNKI 361
F A L L+ S NR+ S GL L C++L L++SGNK+
Sbjct: 274 FGGCANLTLLDWSYNRLRSTGLPRSLVDCRRLEALDMSGNKL 315
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
L +L L DN S + + L CKKL +LNLS N +
Sbjct: 555 LNELFLQDNNFSGPIPSALGDCKKLVNLNLSCNTL 589
>06_03_0615 - 22761375-22761760,22762218-22765026
Length = 1064
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 245 SDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKP 385
S L+ L+LS N + ++ LSG L LN+S N + P
Sbjct: 622 SSLTQLQSLDLSSNGLYGSISVLSGLTSLTSLNISYNNFSGAIPVTP 668
>11_06_0132 - 20431122-20431477,20431739-20433758
Length = 791
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 260 LRKLELSDNRISNGL-TFLSGCKKLAHLNLSGN 355
L+ L+LS N +S + TFLS L +LNLS N
Sbjct: 349 LQTLDLSSNNLSGQIPTFLSNLTMLGYLNLSFN 381
>11_06_0125 - 20356683-20357071,20359531-20362285
Length = 1047
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 260 LRKLELSDNRISNGL-TFLSGCKKLAHLNLSGN 355
L+ L+LS+N +S + TFLS L++LNLS N
Sbjct: 592 LQILDLSNNNLSGQIPTFLSNLTMLSYLNLSFN 624
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 LRKLELSDNRIS-NGLTFLSGCKKLAHLNLSGNKIKDLETLKPL 388
++ L+LS N G L CK L L L+GN+I L TL L
Sbjct: 273 VKVLDLSFNEFKLPGFEPLENCKLLQQLYLAGNQITSLATLPEL 316
>02_01_0422 - 3084940-3087072
Length = 710
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
L++L + N +S L + L C KL +NL GNK+
Sbjct: 291 LKELHICSNNLSGELPSSLGDCTKLVTINLRGNKL 325
>11_08_0011 +
27612206-27615110,27615211-27615538,27615989-27616059,
27616962-27617118,27617676-27617709
Length = 1164
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
FS+ LR +ELSDN++ + + + L L+LSGN +
Sbjct: 488 FSNLTGLRVIELSDNQLQGAIPESIMEMENLLELDLSGNSL 528
>07_03_1176 + 24567720-24570932
Length = 1070
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFL---SGCKKLAHLNLSGN 355
LR+L L+ NR+ + +GC+ L +L+LSGN
Sbjct: 174 LRRLSLASNRLGGAIPDELGGAGCRSLQYLDLSGN 208
>02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722
Length = 1155
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 260 LRKLELSDNRISNGLT--FLSGCKKLAHLNLSGNKI 361
LR L LS N I+ + +SGC++L ++ L GN++
Sbjct: 146 LRHLNLSHNSIAGRIPPPLISGCRRLKNVLLHGNRL 181
>01_06_0716 - 31425189-31426460
Length = 423
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKI 361
L L LS+ +S L C L HL+LSGN+I
Sbjct: 179 LTSLTLSNANLSGFLPHHWHCPNLTHLDLSGNRI 212
>01_06_0664 + 30999365-31002089,31002220-31002686
Length = 1063
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 257 MLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKI 361
+L L+LS NR+S G+ L LNLS N++
Sbjct: 559 VLNALDLSSNRLSGGIPSSLASLNLNSLNLSSNQL 593
>01_05_0608 - 23628100-23631486
Length = 1128
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 200 NTES*QCGSHNTQRFSDAAMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKI 361
N S Q + D L L+LS N +S + LS L+HLNLS N +
Sbjct: 961 NLSSNQFSGTIHDQIGDLKQLESLDLSYNELSGEIPPSLSALTSLSHLNLSYNNL 1015
>12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160
Length = 1054
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +2
Query: 269 LELSDNRISNGLT-FLSGCKKLAHLNLSGNK 358
L+LS+NR+S + L+GC+ + +L L GN+
Sbjct: 556 LDLSNNRLSGEIPQALAGCQSMEYLFLQGNQ 586
>10_01_0071 - 905696-909028
Length = 1110
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGN 355
A L L+LS NR + + LSGC L LNLS N
Sbjct: 184 ATLAVLDLSGNRFTGAIPPSLSGCAGLTTLNLSYN 218
>08_01_0915 + 9019499-9020971
Length = 490
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 239 RFSDAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
+ + +LR L+LS N + + L C+KL LNLS N +
Sbjct: 101 QLGNLTLLRVLDLSANSLDGDIPASLGSCRKLHTLNLSRNHL 142
>06_03_0592 + 22585546-22588573,22588680-22589032
Length = 1126
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRISNG----LTFLSGCKKLAHLNLSGNKIKDL 370
F L +L++S N + G +T LS C KL L L GN + +
Sbjct: 431 FGSLPNLEELDVSYNMLEPGDWSFMTSLSNCSKLTQLMLDGNSFQGI 477
>08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350
Length = 576
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
L KL++ NRIS + + L +LN+ GN++ L
Sbjct: 298 LAKLDIHANRISQLPESIGDLRSLIYLNMRGNQLSSL 334
>08_02_0843 - 21759183-21759556,21760255-21762913
Length = 1010
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 361
L L LS NR+ L +SGC KL L+LS N +
Sbjct: 449 LSSLNLSGNRLYGELPVEISGCSKLYKLDLSYNSL 483
>08_02_0192 + 14048828-14048873,14048960-14051169
Length = 751
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGNKI 361
DA + L+LS++ I+ L S +L HLNLS N I
Sbjct: 66 DAGHVNSLDLSNSNIAGPLFRNFSRIMRLTHLNLSSNSI 104
>04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925
Length = 962
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL-ETLKPL 388
FS++ L LEL D+ I+ T + L ++ L K+K ET++ L
Sbjct: 570 FSESTYLTVLELQDSEITEVPTSIGNLFNLRYIGLRRTKVKSFPETIEKL 619
>03_02_0134 +
5820068-5820178,5822439-5822508,5822893-5822939,
5823067-5823175,5823355-5823440,5823768-5823858,
5824204-5824289,5824649-5824762
Length = 237
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 269 LELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
L +SDN++ + GC L L +GN I+D+
Sbjct: 145 LNVSDNKLIALPESIGGCSSLEELQANGNSIEDV 178
>11_06_0445 - 23679918-23680282,23680415-23683349
Length = 1099
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 215 QCGSHNTQRFSDAAMLRKLELSDNRISNGLT-FLSGCKKLAHLNLSGNKIK 364
Q H + LR L LS N +S + LS C +L +NL N I+
Sbjct: 107 QLNGHISPEIGRLTHLRYLNLSVNALSGEIPETLSSCSRLETINLYSNSIE 157
>11_01_0627 - 5047751-5047758,5047799-5048015,5048759-5049646
Length = 370
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKI 361
LR LEL +I + L SGC L HL G I
Sbjct: 147 LRVLELKYVKIKDSLVDFSGCPALEHLKFWGGFI 180
>10_08_0247 -
16151969-16152091,16152599-16152718,16153480-16153545,
16153663-16153711,16154048-16154185,16154291-16154377,
16155658-16155758,16155847-16155957,16156606-16157025,
16157819-16157983,16158863-16158994,16159189-16159233
Length = 518
Score = 27.5 bits (58), Expect = 9.7
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +3
Query: 15 LRNNLLANLKLFKVLIGIFMNMEKRIILERRGRD-PSQV---KELNLDNCRSTNIVGLTD 182
+ NN L NL V IG+ ++E I R PS + + LN + S + L +
Sbjct: 373 IANNRLENLP---VEIGLLKHLEILIANNNRITSLPSSIGGCESLNEVDLSSNLLAELPE 429
Query: 183 EYTNLQ---ILSLNNVGLTTLKGFPTLLCSE 266
+ NLQ LS+ N GLT+L + CS+
Sbjct: 430 AFGNLQHLKALSVRNNGLTSLPSAFFIKCSQ 460
>06_03_0613 +
22748223-22749513,22750046-22750179,22751066-22751309,
22751401-22751609,22751691-22751740,22751933-22752053,
22752138-22752383
Length = 764
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 236 QRFSDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKI 361
+ FS L+ L LS NR++ + LSG L L+L N++
Sbjct: 158 EHFSRMYSLQSLVLSRNRLNGAVPNLSGLAFLDELDLGHNRL 199
>04_04_1371 +
32995337-32995358,32995745-32995822,32995876-32996019,
32997595-32997930,32998014-32998166,32998286-32998501,
32998600-33000695
Length = 1014
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 221 GSHNTQR-FSDAAMLRKLELSDNRISNGL-TFLSGCKKLAHLNLSGN 355
G+ T+R F LR+L LS N + + TFL + L+LSGN
Sbjct: 310 GALPTERAFGYLRNLRELHLSSNNFTGNISTFLLSLPHIERLDLSGN 356
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,164,819
Number of Sequences: 37544
Number of extensions: 247417
Number of successful extensions: 755
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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