Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060271.seq
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 35 0.043
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 34 0.100
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 34 0.100
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 32 0.40
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 32 0.40
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 32 0.40
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 32 0.40
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 30 1.6
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 30 1.6
U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical p... 29 2.1
U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical p... 29 2.1
U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical p... 29 2.1
AF101318-1|AAC69342.2| 356|Caenorhabditis elegans Hypothetical ... 29 2.8
AF016449-17|AAG24005.1| 306|Caenorhabditis elegans Hypothetical... 29 2.8
Z81531-3|CAB04315.1| 381|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical pr... 28 5.0
X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein. 28 5.0
X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein. 28 5.0
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 28 6.6
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 28 6.6
U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory ... 27 8.7
>Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical
protein F33H2.3 protein.
Length = 229
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 75 NMEKRIILERRGRDPSQVKELNLDNCRSTNIVGLTDEYTNLQILSLNNVGLTTLKGFPTL 254
+M + + E R RDP+ V L LDN I GLTD+ NL++LS+ GLTTL GFPTL
Sbjct: 3 SMAEIYVKELRERDPATVDTLFLDNAEDGQIGGLTDQLINLEMLSMVKCGLTTLAGFPTL 62
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +2
Query: 215 QCGSHNTQRFSDAAMLRKLELSDNRISNGLTF---LSGCKKLAHLNLSGNKIKDLETLKP 385
+CG F L L++SDN++ + +F + L + L+ NK+ L+ L+
Sbjct: 50 KCGLTTLAGFPTLPALTYLDISDNQLGDNASFDVLVKNAPDLKKITLASNKLS-LDNLRC 108
Query: 386 LEAXXXXXXXXXXXXXVTSI-EDYKSKVFAMHPSLKYLDGFDSXTKKLMTVDIEEEDEMN 562
L+ + EDY+ K+F M PSLK LDG D + ++EEE
Sbjct: 109 LKVLPNLFELDLSNNPSLGLLEDYREKMFEMIPSLKILDGCDVDGE-----EVEEEFAGE 163
Query: 563 GNNDS 577
G DS
Sbjct: 164 GGEDS 168
>U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical
protein T19H12.2 protein.
Length = 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 78 MEKRIILERRGRDPSQVKELNLDNCRSTNIVGLTDEYTNLQILSLNNVGLTTLKGFPTL 254
ME+ E RGR+P V L LDN + I G+ ++ T L++LS+ GLTTLKG P L
Sbjct: 1 MEEVYASELRGREPETVDTLFLDNTQGGVIGGINEKLTKLELLSMVKCGLTTLKGMPVL 59
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = +2
Query: 215 QCGSHNTQRFSDAAMLRKLELSDNRISNGLTF--LSGCK-KLAHLNLSGNKIK--DLETL 379
+CG + L L+LSDN + + +F L C ++ + LSGN++ ++ TL
Sbjct: 47 KCGLTTLKGMPVLPALNYLDLSDNELGDDASFDVLIKCAPEIKKITLSGNRLTLDNVRTL 106
Query: 380 KPLEAXXXXXXXXXXXXXVTSIEDYKSKVFAMHPSLKYLDGFD 508
K L + ++DY+ K+F M PSLK LDG D
Sbjct: 107 KMLPNLMELDLSNNSSLGL--LDDYRVKMFEMIPSLKILDGCD 147
>Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical
protein F43G6.3 protein.
Length = 172
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTF---LSGCKKLAHLNLSGNKIKDLETLKPLEAXXXXXXXXXXXX 430
L L+LSDN + + +F +S KL L LSGN + LE ++ L
Sbjct: 7 LNYLDLSDNELGDDASFDVLISSAPKLKRLTLSGNPLS-LEKVRTLRMLPYLQELDLTNI 65
Query: 431 XVT-SIEDYKSKVFAMHPSLKYLDG 502
+ +DY+S VF M PSL L+G
Sbjct: 66 QALGAFDDYRSVVFEMIPSLIILNG 90
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 35.1 bits (77), Expect = 0.043
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPLEAXXXXXXXXXXXXXVT 439
L L L +N+++ LT LS C L L++S NK+ +LKPL VT
Sbjct: 976 LTSLNLQNNKLTT-LTPLS-CPNLVSLDISNNKLASCASLKPLCECKTLENLDCRNNSVT 1033
Query: 440 SIEDYKSKVFAMHPSLKYLD 499
Y + A PS++ LD
Sbjct: 1034 ERRVYVDFIKAQVPSVRKLD 1053
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKD 367
L+ L ++ N++ + LTFL K L +L+L+ NK+KD
Sbjct: 136 LQYLNIASNKLKS-LTFLRDMKDLTNLSLADNKMKD 170
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPLE 391
L+KL L DN I + + L L +LN++ NK+K L L+ ++
Sbjct: 114 LKKLFLYDNAIEDA-SCLCALTNLQYLNIASNKLKSLTFLRDMK 156
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 33.9 bits (74), Expect = 0.100
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 259 HSSVGKPLSVVRPTLLRLSICKFVYSSVKPTMFVLLQLSRFSSFTCEGSLP 107
HSS + R LSIC FV++ V++ + F FT EGS P
Sbjct: 429 HSSGNYTFDLQRSNKTELSICDFVFNIPAANSAVVMTFTEFDKFTQEGSGP 479
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 33.9 bits (74), Expect = 0.100
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 259 HSSVGKPLSVVRPTLLRLSICKFVYSSVKPTMFVLLQLSRFSSFTCEGSLP 107
HSS + R LSIC FV++ V++ + F FT EGS P
Sbjct: 429 HSSGNYTFDLQRSNKTELSICDFVFNIPAANSAVVMTFTEFDKFTQEGSGP 479
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRISNGLTF---LSGCKKLAHLNLSGNKIKDLE 373
FSD++ L L++S+N IS L F + C KL +++ NKIK L+
Sbjct: 468 FSDSSELHSLDVSNNEIS--LLFKDAFARCPKLRKISMKMNKIKSLD 512
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 233 TQRFSDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLE 373
T R S AA+ R ++LSDNR++ + L L LNL+ N I+ +E
Sbjct: 527 TTRLSLAAITR-VDLSDNRLNTFPSILFQMPSLRSLNLADNSIRKIE 572
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 242 FSDAAMLRKLELSDNRISNGLTF---LSGCKKLAHLNLSGNKIKDLE 373
FSD++ L L++S+N IS L F + C KL +++ NKIK L+
Sbjct: 468 FSDSSELHSLDVSNNEIS--LLFKDAFARCPKLRKISMKMNKIKSLD 512
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 233 TQRFSDAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLE 373
T R S AA+ R ++LSDNR++ + L L LNL+ N I+ +E
Sbjct: 525 TTRLSLAAITR-VDLSDNRLNTFPSILFQMPSLRSLNLADNSIRKIE 570
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 251 AAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLE 373
A L+ L+L++N I L + L HLNL+GNK+ ++
Sbjct: 216 AKTLKTLKLAENMIHATPEALRDLRNLTHLNLNGNKLNRID 256
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 230 NTQRFSDAAMLRKLELSDNRISN-GLTFLSGCKKLAHLNLSGNKIKDL 370
N + DA L +++S N I + C+KL+H+ LS N I++L
Sbjct: 598 NRKLLQDATELTSIDISHNGIIDVDSDAFCECRKLSHIKLSHNYIRNL 645
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 311 LSGCKKLAHLNLSGNKIKDLE 373
LSG K+L HL++S NKI L+
Sbjct: 285 LSGMKQLEHLDISKNKIMSLK 305
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 215 QCG--SHNTQRFSDAAMLRKLELSDNRISNGL--TFLSGCKKLAHLNLSGNKIKDLETL 379
+CG S + + D L +L+LS ISN + TF + L LNL NK+K L L
Sbjct: 383 ECGFTSISADQLKDYPKLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKLKSLPNL 441
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 215 QCG--SHNTQRFSDAAMLRKLELSDNRISNGL--TFLSGCKKLAHLNLSGNKIKDLETL 379
+CG S + + D L +L+LS ISN + TF + L LNL NK+K L L
Sbjct: 383 ECGFTSISADQLKDYPKLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKLKSLPNL 441
>U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical
protein ZK546.2b protein.
Length = 227
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
+ L++L L++N + L KKL LNL+GNK+K L
Sbjct: 50 SQLKQLHLANNCLEFLPDELGSMKKLEILNLAGNKLKAL 88
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 251 AAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 391
A +LR LELS+N+I F+ +L L+L+ N ++ +L ++K LE
Sbjct: 26 ADVLRNLELSENKIREIPIFIGQFSQLKQLHLANNCLEFLPDELGSMKKLE 76
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 391
L+ ++LS N + + GC +L LNL+GN+I+ D+ LK +E
Sbjct: 98 LKTIDLSSNVFTVFPVAVIGCLQLDILNLNGNQIESLPDDISNLKVIE 145
>U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical
protein ZK546.2a protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
+ L++L L++N + L KKL LNL+GNK+K L
Sbjct: 308 SQLKQLHLANNCLEFLPDELGSMKKLEILNLAGNKLKAL 346
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 251 AAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 391
A +LR LELS+N+I F+ +L L+L+ N ++ +L ++K LE
Sbjct: 284 ADVLRNLELSENKIREIPIFIGQFSQLKQLHLANNCLEFLPDELGSMKKLE 334
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 391
L+ ++LS N + + GC +L LNL+GN+I+ D+ LK +E
Sbjct: 356 LKTIDLSSNVFTVFPVAVIGCLQLDILNLNGNQIESLPDDISNLKVIE 403
>U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical
protein ZK546.2c protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 254 AMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
+ L++L L++N + L KKL LNL+GNK+K L
Sbjct: 324 SQLKQLHLANNCLEFLPDELGSMKKLEILNLAGNKLKAL 362
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 251 AAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 391
A +LR LELS+N+I F+ +L L+L+ N ++ +L ++K LE
Sbjct: 300 ADVLRNLELSENKIREIPIFIGQFSQLKQLHLANNCLEFLPDELGSMKKLE 350
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 260 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 391
L+ ++LS N + + GC +L LNL+GN+I+ D+ LK +E
Sbjct: 372 LKTIDLSSNVFTVFPVAVIGCLQLDILNLNGNQIESLPDDISNLKVIE 419
>AF101318-1|AAC69342.2| 356|Caenorhabditis elegans Hypothetical
protein Y73C8C.4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 162 NIVGLTDEYTNLQILS--LNNVGLTTLKGFPTLLCSENWNC 278
N++ LT+EY+N+Q+ S N+ TT PT C +NC
Sbjct: 50 NLMNLTNEYSNIQVTSEIAKNIN-TTCNKIPT--CFGQFNC 87
>AF016449-17|AAG24005.1| 306|Caenorhabditis elegans Hypothetical
protein C50H11.17 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 162 NIVGLTDEYTNLQILS--LNNVGLTTLKGFPTLLCSENWNC 278
N++ LT+EY+N+Q+ S N+ TT PT C +NC
Sbjct: 50 NLMNLTNEYSNIQVTSEIAKNIN-TTCNKIPT--CFGQFNC 87
>Z81531-3|CAB04315.1| 381|Caenorhabditis elegans Hypothetical
protein F36D3.3 protein.
Length = 381
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 190 VYSSVKPTMF-VLLQLSRFSSFTCEGSLPLRSKMILFS 80
V ++ P +F V L +FS F CE S PLR ++FS
Sbjct: 11 VSTASAPNIFGVYPYLLKFSPFNCEKSNPLRFVFMIFS 48
>Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical
protein C46F11.1b protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 586 SSSTIIVSIHFIFFFYVHCHQLLGXTIKT 500
S +T+IV FF VHC Q++G + +
Sbjct: 364 SQTTVIVRFFGYFFMIVHCGQVVGNMVSS 392
>Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical
protein C46F11.1a protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 586 SSSTIIVSIHFIFFFYVHCHQLLGXTIKT 500
S +T+IV FF VHC Q++G + +
Sbjct: 369 SQTTVIVRFFGYFFMIVHCGQVVGNMVSS 397
>X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 586 SSSTIIVSIHFIFFFYVHCHQLLGXTIKT 500
S +T+IV FF VHC Q++G + +
Sbjct: 364 SQTTVIVRFFGYFFMIVHCGQVVGNMVSS 392
>X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 586 SSSTIIVSIHFIFFFYVHCHQLLGXTIKT 500
S +T+IV FF VHC Q++G + +
Sbjct: 369 SQTTVIVRFFGYFFMIVHCGQVVGNMVSS 397
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
D LR ++ S+N + L + L LNLSGNKI+ L
Sbjct: 220 DMHNLRDVDFSENNLPIVPEALFKLRNLRKLNLSGNKIEKL 260
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 248 DAAMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 370
D LR ++ S+N + L + L LNLSGNKI+ L
Sbjct: 220 DMHNLRDVDFSENNLPIVPEALFKLRNLRKLNLSGNKIEKL 260
>U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory
abnormality protein18 protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 188 YKFTNTES*QCGSHNTQRFSDAAMLRKLELSDNRISNGLTFLSG 319
YK N S C S AAM +L + D R S G+T L G
Sbjct: 351 YKTPNLRSVLCAGAPIDSNSAAAMKSRLNIKDFRQSFGMTELGG 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,845,491
Number of Sequences: 27780
Number of extensions: 241756
Number of successful extensions: 690
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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