Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060270.seq
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 3e-40
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 161 3e-40
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 153 9e-38
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 4e-37
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 131 3e-31
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 86 2e-17
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 58 4e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 5e-05
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.001
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 40 0.002
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.017
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 34 0.091
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.16
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.37
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 31 0.64
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 31 0.84
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 1.1
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 30 1.1
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 29 1.9
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 29 3.4
SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_40492| Best HMM Match : PROCN (HMM E-Value=0) 28 4.5
SB_22051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 28 5.9
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 27 7.9
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 27 7.9
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 133 SDYNIQKESTLHLVLRLRGGM 153
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 209 SDYNIQKESTLHLVLRLRGGM 229
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 285 SDYNIQKESTLHLVLRLRGGM 305
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 361 SDYNIQKESTLHLVLRLRGGM 381
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 377 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 436
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 437 SDYNIQKESTLHLVLRLRGGM 457
Score = 159 bits (387), Expect = 1e-39
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 453 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 512
Query: 436 SXYNIQKESTLHLVLRLRGG 495
S YNIQKESTLHLVLRLRGG
Sbjct: 513 SDYNIQKESTLHLVLRLRGG 532
Score = 153 bits (371), Expect = 9e-38
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 365 IQKESTLHLVL 375
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 441 IQKESTLHLVL 451
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 517 IQKESTLHLVL 527
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 133 SDYNIQKESTLHLVLRLRGGM 153
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 209 SDYNIQKESTLHLVLRLRGGM 229
Score = 161 bits (392), Expect = 3e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 285 SDYNIQKESTLHLVLRLRGGM 305
Score = 159 bits (387), Expect = 1e-39
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 436 SXYNIQKESTLHLVLRLRGG 495
S YNIQKESTLHLVLRLRGG
Sbjct: 361 SDYNIQKESTLHLVLRLRGG 380
Score = 153 bits (371), Expect = 9e-38
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 365 IQKESTLHLVL 375
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 153 bits (371), Expect = 9e-38
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 89.4 bits (212), Expect = 2e-18
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL++ ++L D R+L
Sbjct: 73 LRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSL 131
Query: 436 SXYNIQKESTLHLVL 480
+ YNI++ S LHL L
Sbjct: 132 ADYNIKQGSILHLFL 146
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQI VK KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 221 IQKESTLHLVLL 256
I++ S LHL L+
Sbjct: 136 IKQGSILHLFLI 147
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 151 bits (366), Expect = 4e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 448 IQKESTLHLVLRLRGG 495
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 146 bits (355), Expect = 8e-36
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 131 bits (317), Expect = 3e-31
Identities = 63/63 (100%), Positives = 63/63 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 221 IQK 229
IQK
Sbjct: 139 IQK 141
Score = 126 bits (303), Expect = 2e-29
Identities = 62/67 (92%), Positives = 62/67 (92%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 436 SXYNIQK 456
S YNIQK
Sbjct: 135 SDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 85.8 bits (203), Expect = 2e-17
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +1
Query: 373 IPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHLVLRLRGGM 498
IPPDQQRLIFAGKQLEDGRTLS YNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 77.8 bits (183), Expect = 6e-15
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +2
Query: 146 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 253
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 37
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 58.4 bits (135), Expect = 4e-09
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNI 450
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 451 QKESTLHLVLRLRGG 495
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
Score = 54.0 bits (124), Expect = 8e-08
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +2
Query: 47 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 223
I V TLTG+ I + + P TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 224 QKESTLHLVL-LFVEEC 271
+TLHL++ L EC
Sbjct: 133 FAGATLHLIVRLLGGEC 149
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 211
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 212 DYNIQKES 235
+YNI ++S
Sbjct: 127 EYNIDEKS 134
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 438
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 439 XYNIQKES 462
YNI ++S
Sbjct: 127 EYNIDEKS 134
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSXY 444
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 445 NIQKESTLHLVLR 483
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 217
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 218 NIQKESTLHLV 250
++++ + +V
Sbjct: 61 SVKENDVILMV 71
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 271 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 448 IQK 456
+++
Sbjct: 67 LKQ 69
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 44 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 221 IQK 229
+++
Sbjct: 67 LKQ 69
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 142
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.069
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 369
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.017
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 35.1 bits (77), Expect = 0.039
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L ++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 35.5 bits (78), Expect = 0.030
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 65 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES-TL 241
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++ T
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 242 HLVLL 256
+L LL
Sbjct: 104 YLYLL 108
Score = 34.3 bits (75), Expect = 0.069
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 292 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKES-TL 468
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++ T
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 469 HLVL 480
+L L
Sbjct: 104 YLYL 107
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 33.9 bits (74), Expect = 0.091
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +2
Query: 50 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 229
FV G+ ITL P + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 230 ESTLHLVLLFVEECRSS 280
+TL + L + +S
Sbjct: 229 GATLQIELQSTDPVNAS 245
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 277 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQK 456
FV G+ ITL + ++ + G P + ++ K LED T++ + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 457 ESTLHLVLR 483
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 143 GIPPDQQRLIFAGKQLEDGRTLSDYN 220
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 370 GIPPDQQRLIFAGKQLEDGRTLSXYN 447
GIP ++QRLIF GK L+D + L ++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +2
Query: 47 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 227 KEST 238
+++T
Sbjct: 245 QKAT 248
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 274 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKI 238
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 104 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 247
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 331 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSXYNIQKESTLHL 474
T+ ++K + +K G+ RL+ GK++ D L YNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 31.1 bits (67), Expect = 0.64
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 29 NKIIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
N +I + +L G I P +++A IP DQ L F + LEDGR
Sbjct: 525 NLLIGPDLLNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRP 584
Query: 209 SDYNI 223
Y +
Sbjct: 585 DVYQM 589
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 280 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNI 450
+ +L G I +++A IP DQ L F + LEDGR Y +
Sbjct: 533 LNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 53 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR---TLSDYNI 223
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 224 QKESTLHLVLLFVE 265
+T+ L+++ E
Sbjct: 120 PPYATISLIVVLYE 133
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 457 ESTLHLVLRLRGGM 498
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 457 ESTLHLVLRLRGGM 498
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -1
Query: 405 SKDETLLI--RRNSFFVLDLRLH-ILNCVRSFYFQSDGLSGQSFHEDLHSSTKSSTRWSV 235
S+D+ L+ + NSF + +H + C + Y Q L + + +H+S + TR+S
Sbjct: 673 SRDQGFLVTSKGNSFIKANKNVHPVQTCTKLTYIQQVRLRAEKQKDHIHASNGNRTRFSS 732
Query: 234 D 232
D
Sbjct: 733 D 733
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +1
Query: 187 AGRRTHLVRLQHSKRIHTPSGTALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 366
AG THL LQ++K R +++ L G +IT+ +E D +EN++ +K
Sbjct: 72 AGNLTHLY-LQNNKISRIEGLDHCRRLSKLY---LGGNSITV-IEGLDKLENLRELHMEK 126
Query: 367 EGIPPDQQRLIFAGKQLED-GRTLSXYNIQKES 462
+ +PP ++L+F + L+ + L NI + +
Sbjct: 127 QHLPPG-EKLLFDPRTLQALSKCLCVLNISENN 158
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 423
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 68 GKTITLEVEPS-DTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
G T E+E + +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 241 PSGTALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 399
P G LR G + V + K I LE DT+ ++ QD + P+++ +
Sbjct: 1216 PEGYPLRSGSTLTVVKYSDKPIRLEAIDEDTMASLLVNKQDMIWVAPNKENKV 1268
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 120 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHS 242
++R K +KE L+++ V ++ + D PC T PHS
Sbjct: 798 KQRQKIQKELLMLSGVPNIQGLAEVIDRPCGGTHTLSFPHS 838
>SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 753
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 211 RLQHSKRIHTPSGTALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 357
RL K PS ++RG +++ +KTL G E E D + +K I
Sbjct: 427 RLAKRKDYRRPSAISMRGNIKVAIKTLKGG--ATESEQKDLLSELKILI 473
>SB_40492| Best HMM Match : PROCN (HMM E-Value=0)
Length = 1784
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 177 LASSWKTDAPCQTTTFKKNPHSIWYCSSWR-NADLRENSDRKDHHF 311
L SW P T F+K+ H++ Y WR D ++ K + F
Sbjct: 1375 LEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF 1420
>SB_22051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 366 FVLDLRLHILNCVRSFYFQSDGLSGQSFHEDLHSSTKSSTRWSVDSF 226
F+L+ R L+ + FY+ +D LS + E+ +S K RW + F
Sbjct: 324 FILEPR-SFLDKLSDFYYHTDILSRAACEENPYSRMKEVIRWYLSGF 369
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +1
Query: 259 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 438
R +Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 439 XYNIQ 453
+Q
Sbjct: 771 EEKLQ 775
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +1
Query: 259 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 438
R +Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T +
Sbjct: 7 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDT 66
Query: 439 XYNIQ 453
+Q
Sbjct: 67 EEKLQ 71
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 133 RQRRNSS*STASHLCWQAAGRRTHLVRLQHSKRIHTPSGTALRGGMQIFVKTLTGKTITL 312
RQ + ASH AGR+ + + Q+ K+ P + + Q KT + K
Sbjct: 240 RQANRKTKGQASHKTKGQAGRKIKISKPQNHKQAPRPRQASPKTKGQASPKTKSTKPARP 299
Query: 313 EVEASDTIENVKAKIQDKEGIPPDQQRL 396
+AS + K + QDK+ P Q L
Sbjct: 300 R-QASPKAKTSKPQDQDKQVARPRQSSL 326
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,852,987
Number of Sequences: 59808
Number of extensions: 372416
Number of successful extensions: 1122
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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