Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060270.seq
(558 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 161 1e-41
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 1.7
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 24 2.9
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 24 3.9
AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding pr... 23 5.1
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 9.0
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 161 bits (392), Expect = 1e-41
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
S YNIQKESTLHLVLRLRGGM
Sbjct: 133 SDYNIQKESTLHLVLRLRGGM 153
Score = 159 bits (387), Expect = 4e-41
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGG 495
S YNIQKESTLHLVLRLRGG
Sbjct: 209 SDYNIQKESTLHLVLRLRGG 228
Score = 153 bits (371), Expect = 4e-39
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (355), Expect = 3e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 146 bits (355), Expect = 3e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 146 bits (355), Expect = 3e-37
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 25.0 bits (52), Expect = 1.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 232 FFLNVVV*QGASVFQLLASKDETLLIRRNSF 140
FF+ V+ G VF +A DET + R N+F
Sbjct: 1320 FFIYAVI--GMQVFGKIAMDDETSIHRNNNF 1348
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 24.2 bits (50), Expect = 2.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 198 DAPCQTTTFKKNPHSIWYCSSWRNADLRENSDRK 299
D Q + K PH I YC WR DL+ + + K
Sbjct: 86 DGRLQVSHRKGLPHVI-YCRVWRWPDLQSHHELK 118
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 23.8 bits (49), Expect = 3.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 339 LNCVRSFYFQSDGLSGQSFH 280
+ CVR+ Y + +SG FH
Sbjct: 267 VRCVRTIYDEHQRISGNGFH 286
>AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding
protein AgamOBP38 protein.
Length = 336
Score = 23.4 bits (48), Expect = 5.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -1
Query: 390 LLIRRNSFFVLDLRLHILNCVRSFYFQSDGLSGQSFHEDLHSSTKSSTRW 241
L I R S + D LNC + + GL+ + +H++ S ++ R+
Sbjct: 46 LNISRQSLYAYDSAAVPLNCGSNCLLRCIGLNARWWHDETGLSERALVRF 95
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 22.6 bits (46), Expect = 9.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 364 KEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHLVLRL 486
K P Q R IF G+ +++ + +Q++ HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,892
Number of Sequences: 2352
Number of extensions: 10662
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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