Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060270.seq
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 160 7e-40
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 160 7e-40
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 160 7e-40
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 160 7e-40
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 160 7e-40
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 160 7e-40
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 160 7e-40
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 160 7e-40
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 160 7e-40
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 160 7e-40
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 160 7e-40
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 160 7e-40
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 158 2e-39
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 157 5e-39
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 157 6e-39
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 150 7e-37
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 150 7e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 149 9e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 149 9e-37
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 149 9e-37
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 149 9e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 149 9e-37
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 146 9e-36
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 114 4e-26
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 69 2e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 66 2e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 8e-11
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 56 1e-08
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 54 6e-08
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 53 1e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 6e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 8e-07
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 8e-07
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 50 8e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 1e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 49 2e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 49 2e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 49 2e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 49 2e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 49 2e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 48 3e-06
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 48 4e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 47 7e-06
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 47 1e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 47 1e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 1e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 45 3e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 44 7e-05
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 43 2e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 42 3e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 42 3e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 41 6e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 9e-04
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.008
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.008
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.008
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 37 0.010
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 36 0.014
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 35 0.032
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.056
At1g11970.1 68414.m01383 hypothetical protein 34 0.056
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.17
At2g01110.1 68415.m00019 thylakoid membrane formation protein / ... 30 0.91
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 30 0.91
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 29 2.1
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 29 2.8
At1g47680.1 68414.m05297 hypothetical protein 29 2.8
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 28 3.7
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 3.7
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 28 4.9
At3g05680.1 68416.m00634 expressed protein 28 4.9
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 285 ADYNIQKESTLHLVLRLRGGM 305
Score = 158 bits (383), Expect = 3e-39
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 361 ADYNIQKESTLHLVLRLRGG 380
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 365 IQKESTLHLVL 375
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 158 bits (383), Expect = 3e-39
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 158 bits (383), Expect = 3e-39
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (354), Expect = 9e-36
Identities = 83/143 (58%), Positives = 99/143 (69%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVLLFVEECRSS*KL*PERPSLWK*KLRTQLRM*RRRSKTKKEFLLINSVSS 400
IQKESTLHLVL + K + + + + + + + K+ FL +SVSS
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSS 272
Query: 401 LLASNWKTDAHCXXTIFKRNLHF 469
L S+ + D T +R+L F
Sbjct: 273 SLESSLRMDVLWPTTTSRRSLLF 295
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 120 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSIWYC 254
+ + + K+ FL +SVSS L SS + D TTT +++ W C
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSC 299
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 285 ADYNIQKESTLHLVLRLRGGM 305
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 361 ADYNIQKESTLHLVLRLRGGM 381
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (354), Expect = 9e-36
Identities = 83/143 (58%), Positives = 99/143 (69%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 221 IQKESTLHLVLLFVEECRSS*KL*PERPSLWK*KLRTQLRM*RRRSKTKKEFLLINSVSS 400
IQKESTLHLVL + K + + + + + + + K+ FL +SVSS
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSS 424
Query: 401 LLASNWKTDAHCXXTIFKRNLHF 469
L S+ + D T +R+L F
Sbjct: 425 SLESSLRMDVLWPTTTSRRSLLF 447
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 120 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSIWYC 254
+ + + K+ FL +SVSS L SS + D TTT +++ W C
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSC 451
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 285 ADYNIQKESTLHLVLRLRGGM 305
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (354), Expect = 9e-36
Identities = 83/143 (58%), Positives = 99/143 (69%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVLLFVEECRSS*KL*PERPSLWK*KLRTQLRM*RRRSKTKKEFLLINSVSS 400
IQKESTLHLVL + K + + + + + + + K+ FL +SVSS
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSS 348
Query: 401 LLASNWKTDAHCXXTIFKRNLHF 469
L S+ + D T +R+L F
Sbjct: 349 SLESSLRMDVLWPTTTSRRSLLF 371
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 120 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSIWYC 254
+ + + K+ FL +SVSS L SS + D TTT +++ W C
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSC 375
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 285 ADYNIQKESTLHLVLRLRGGM 305
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 361 ADYNIQKESTLHLVLRLRGGM 381
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (354), Expect = 9e-36
Identities = 83/143 (58%), Positives = 99/143 (69%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 221 IQKESTLHLVLLFVEECRSS*KL*PERPSLWK*KLRTQLRM*RRRSKTKKEFLLINSVSS 400
IQKESTLHLVL + K + + + + + + + K+ FL +SVSS
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSS 424
Query: 401 LLASNWKTDAHCXXTIFKRNLHF 469
L S+ + D T +R+L F
Sbjct: 425 SLESSLRMDVLWPTTTSRRSLLF 447
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 120 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSIWYC 254
+ + + K+ FL +SVSS L SS + D TTT +++ W C
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSC 451
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 285 ADYNIQKESTLHLVLRLRGGM 305
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 146 bits (354), Expect = 9e-36
Identities = 83/143 (58%), Positives = 99/143 (69%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVLLFVEECRSS*KL*PERPSLWK*KLRTQLRM*RRRSKTKKEFLLINSVSS 400
IQKESTLHLVL + K + + + + + + + K+ FL +SVSS
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSS 348
Query: 401 LLASNWKTDAHCXXTIFKRNLHF 469
L S+ + D T +R+L F
Sbjct: 349 SLESSLRMDVLWPTTTSRRSLLF 371
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 120 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSIWYC 254
+ + + K+ FL +SVSS L SS + D TTT +++ W C
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSC 375
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 158 bits (383), Expect = 3e-39
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 209 ADYNIQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 158 bits (383), Expect = 3e-39
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 158 bits (383), Expect = 3e-39
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 209 ADYNIQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 133 ADYNIQKESTLHLVLRLRGGM 153
Score = 160 bits (388), Expect = 7e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 209 ADYNIQKESTLHLVLRLRGGM 229
Score = 158 bits (383), Expect = 3e-39
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 158 bits (384), Expect = 2e-39
Identities = 75/81 (92%), Positives = 80/81 (98%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL
Sbjct: 75 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTL 134
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 135 ADYNIQKESTLHLVLRLRGGM 155
Score = 148 bits (359), Expect = 2e-36
Identities = 72/81 (88%), Positives = 76/81 (93%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 151 LRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 210
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRL GGM
Sbjct: 211 ADYNIQKESTLHLVLRLCGGM 231
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 139 IQKESTLHLVL 149
Score = 137 bits (332), Expect = 4e-33
Identities = 70/81 (86%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RT 432
L GGMQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG T
Sbjct: 227 LCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYT 286
Query: 433 LSXYNIQKESTLHLVLRLRGG 495
L+ YNIQKESTLHLVLRLRGG
Sbjct: 287 LADYNIQKESTLHLVLRLRGG 307
Score = 132 bits (320), Expect = 1e-31
Identities = 64/71 (90%), Positives = 67/71 (94%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 215 IQKESTLHLVL 225
Score = 124 bits (298), Expect = 5e-29
Identities = 63/72 (87%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 217
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 218 NIQKESTLHLVL 253
NIQKESTLHLVL
Sbjct: 291 NIQKESTLHLVL 302
Score = 118 bits (285), Expect = 2e-27
Identities = 58/77 (75%), Positives = 66/77 (85%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+ Y+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 448 IQKESTLHLVLRLRGGM 498
IQK+S LHL LRLRGGM
Sbjct: 63 IQKDSILHLALRLRGGM 79
Score = 108 bits (259), Expect = 3e-24
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQI KTLT KTIT++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 221 IQKESTLHLVL 253
IQK+S LHL L
Sbjct: 63 IQKDSILHLAL 73
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 157 bits (381), Expect = 5e-39
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = +1
Query: 259 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 438
RGGMQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct: 74 RGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 439 XYNIQKESTLHLVLRLRGGM 498
YNIQKESTLHLVLRLRGGM
Sbjct: 134 DYNIQKESTLHLVLRLRGGM 153
Score = 152 bits (368), Expect = 2e-37
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTL 208
Query: 436 SXYNIQKESTLHLVLRLRGG 495
+ YNIQKESTLHLVLRLRGG
Sbjct: 209 ADYNIQKESTLHLVLRLRGG 228
Score = 140 bits (338), Expect = 8e-34
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 135 bits (326), Expect = 2e-32
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 134 bits (324), Expect = 4e-32
Identities = 63/77 (81%), Positives = 71/77 (92%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
+Q++STLHL+LR RGGM
Sbjct: 61 VQEDSTLHLLLRFRGGM 77
Score = 127 bits (306), Expect = 6e-30
Identities = 60/73 (82%), Positives = 67/73 (91%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVLLF 259
+Q++STLHL+L F
Sbjct: 61 VQEDSTLHLLLRF 73
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 157 bits (380), Expect = 6e-39
Identities = 76/81 (93%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL
Sbjct: 148 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTL 207
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRLRGGM
Sbjct: 208 ADYNIQKESTLHLVLRLRGGM 228
Score = 153 bits (370), Expect = 1e-37
Identities = 76/81 (93%), Positives = 79/81 (97%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ NIQKESTLHLVLRLRGGM
Sbjct: 133 AD-NIQKESTLHLVLRLRGGM 152
Score = 151 bits (367), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 138 bits (333), Expect = 3e-33
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 212 IQKESTLHLVL 222
Score = 134 bits (323), Expect = 5e-32
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 136 IQKESTLHLVL 146
Score = 110 bits (264), Expect = 7e-25
Identities = 53/57 (92%), Positives = 55/57 (96%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 426
LRGGMQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 224 LRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
Score = 101 bits (241), Expect = 4e-22
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 199
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 150 bits (363), Expect = 7e-37
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 150 bits (363), Expect = 7e-37
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGG 495
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGG 495
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGG 495
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 104 bits (249), Expect = 5e-23
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 73 LRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
Y I+ S LHLVL LRGG+
Sbjct: 133 KDYAIEGGSVLHLVLALRGGL 153
Score = 93.5 bits (222), Expect = 9e-20
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +2
Query: 47 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 227 KESTLHLVL 253
S LHLVL
Sbjct: 139 GGSVLHLVL 147
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGG 495
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 106 bits (255), Expect = 9e-24
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 73 LRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 436 SXYNIQKESTLHLVLRLRGG 495
YNI+ S LHLVL LRGG
Sbjct: 133 KDYNIEGGSVLHLVLALRGG 152
Score = 96.7 bits (230), Expect = 9e-21
Identities = 43/69 (62%), Positives = 56/69 (81%)
Frame = +2
Query: 47 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 227 KESTLHLVL 253
S LHLVL
Sbjct: 139 GGSVLHLVL 147
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+ YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 448 IQKESTLHLVLRLRGG 495
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 141 bits (341), Expect = 3e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 146 bits (354), Expect = 9e-36
Identities = 72/81 (88%), Positives = 77/81 (95%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 435
LRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL
Sbjct: 75 LRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTL 134
Query: 436 SXYNIQKESTLHLVLRLRGGM 498
+ YNIQKESTLHLVLRL GGM
Sbjct: 135 ADYNIQKESTLHLVLRLCGGM 155
Score = 131 bits (316), Expect = 4e-31
Identities = 64/77 (83%), Positives = 70/77 (90%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+ YN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 448 IQKESTLHLVLRLRGGM 498
IQKESTLHLVLRLRGGM
Sbjct: 63 IQKESTLHLVLRLRGGM 79
Score = 130 bits (315), Expect = 5e-31
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 139 IQKESTLHLVL 149
Score = 121 bits (291), Expect = 4e-28
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 221 IQKESTLHLVL 253
IQKESTLHLVL
Sbjct: 63 IQKESTLHLVL 73
Score = 120 bits (290), Expect = 5e-28
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = +1
Query: 259 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 438
RGGMQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL
Sbjct: 549 RGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLG 608
Query: 439 XYNIQKESTLHLVLRLR 489
Y+I K+STL+LVLRLR
Sbjct: 609 DYDIHKKSTLYLVLRLR 625
Score = 110 bits (264), Expect = 7e-25
Identities = 54/78 (69%), Positives = 61/78 (78%)
Frame = +1
Query: 265 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXY 444
GMQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL Y
Sbjct: 392 GMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDY 451
Query: 445 NIQKESTLHLVLRLRGGM 498
NI+ ESTLHL +R GM
Sbjct: 452 NIRNESTLHLFFHIRHGM 469
Score = 110 bits (264), Expect = 7e-25
Identities = 55/71 (77%), Positives = 60/71 (84%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 221 IQKESTLHLVL 253
I K+STL+LVL
Sbjct: 612 IHKKSTLYLVL 622
Score = 109 bits (261), Expect = 2e-24
Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = +1
Query: 250 TALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLED 423
T R GMQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLIF GK+L+D
Sbjct: 313 TRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKD 372
Query: 424 GRTLSXYNIQKESTLHLVLRLR 489
G TL+ Y+IQKESTLHLVL ++
Sbjct: 373 GCTLADYSIQKESTLHLVLGMQ 394
Score = 107 bits (257), Expect = 5e-24
Identities = 58/86 (67%), Positives = 64/86 (74%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 LRGGMQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 420
LRG M IFVK L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE
Sbjct: 234 LRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLE 293
Query: 421 DGRTLSXYNIQKESTLHLVLRLRGGM 498
GRTL+ YNIQK STL+LV R R GM
Sbjct: 294 GGRTLAHYNIQKGSTLYLVTRFRCGM 319
Score = 106 bits (254), Expect = 1e-23
Identities = 61/103 (59%), Positives = 74/103 (71%), Gaps = 7/103 (6%)
Frame = +1
Query: 256 LRGGMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL- 417
L GGMQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L
Sbjct: 151 LCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELF 210
Query: 418 -EDGRTLSXYNIQKESTLHLVLRLRGGM*FHNNLFLKNKKIHS 543
ED RTL+ Y I+ STL L LRLRG M +F+KN +S
Sbjct: 211 TEDNRTLADYGIRNRSTLCLALRLRGDM----YIFVKNLPYNS 249
Score = 105 bits (253), Expect = 2e-23
Identities = 55/73 (75%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSD 214
MQIFVKTLT K I LEVE DTIENVKA +QDKEGI P+ QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 215 YNIQKESTLHLVL 253
Y+IQKESTLHLVL
Sbjct: 379 YSIQKESTLHLVL 391
Score = 103 bits (248), Expect = 6e-23
Identities = 51/69 (73%), Positives = 56/69 (81%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
MQIFVK GK ITLEV SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 221 IQKESTLHL 247
I+ ESTLHL
Sbjct: 453 IRNESTLHL 461
Score = 99 bits (238), Expect = 1e-21
Identities = 55/88 (62%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
Frame = +1
Query: 256 LRGGMQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 414
+R GMQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+
Sbjct: 465 IRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRV 524
Query: 415 LEDGRTLSXYNIQKESTLHLVLRLRGGM 498
L RTL YNIQK ST+H + RGGM
Sbjct: 525 LVGSRTLLDYNIQKGSTIHQLFLQRGGM 552
Score = 95.5 bits (227), Expect = 2e-20
Identities = 52/78 (66%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Frame = +2
Query: 41 MQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 205
M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 206 LSDYNIQKESTLHLVLLF 259
L+ YNIQK STL+LV F
Sbjct: 298 LAHYNIQKGSTLYLVTRF 315
Score = 92.7 bits (220), Expect = 2e-19
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 7/78 (8%)
Frame = +2
Query: 41 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 199
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 200 RTLSDYNIQKESTLHLVL 253
RTL+DY I+ STL L L
Sbjct: 215 RTLADYGIRNRSTLCLAL 232
Score = 91.9 bits (218), Expect = 3e-19
Identities = 51/79 (64%), Positives = 56/79 (70%), Gaps = 7/79 (8%)
Frame = +2
Query: 41 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 199
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 200 RTLSDYNIQKESTLHLVLL 256
RTL DYNIQK ST+H + L
Sbjct: 529 RTLLDYNIQKGSTIHQLFL 547
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 114 bits (274), Expect = 4e-26
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
+M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DY
Sbjct: 85 VMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADY 144
Query: 218 NIQKESTLHLV 250
NIQ +S LHL+
Sbjct: 145 NIQNDSILHLI 155
Score = 113 bits (271), Expect = 1e-25
Identities = 54/73 (73%), Positives = 61/73 (83%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+ YN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 448 IQKESTLHLVLRL 486
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 448 IQKESTLHLVLRLRGG 495
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 87.0 bits (206), Expect = 7e-18
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 221 IQKESTLHLVLLFVEEC 271
+++ S LHLVL C
Sbjct: 61 LERGSVLHLVLALRGGC 77
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 184
IM IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 49 IMMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 68.1 bits (159), Expect = 4e-12
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 411
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 67.7 bits (158), Expect = 5e-12
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +2
Query: 35 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 214
++M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 215 YNIQKESTL 241
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 63.7 bits (148), Expect = 8e-11
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+S YN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 448 IQKESTL 468
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVK 121
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVE-ASDTIE 339
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/24 (54%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Frame = +1
Query: 271 QIFVKTLTGKTITLEV-EASDTIE 339
+I +KT+ GK+I LEV ++SDTI+
Sbjct: 97 RISIKTVKGKSINLEVADSSDTID 120
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 448 IQKESTLHLVLR 483
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 64.9 bits (151), Expect = 3e-11
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 221 IQKESTLHLVL 253
++ TLHL++
Sbjct: 84 LENGHTLHLIV 94
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 63.7 bits (148), Expect = 8e-11
Identities = 30/75 (40%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +1
Query: 268 MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXY 444
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 445 NIQKESTLHLVLRLR 489
+I+++++L LV R++
Sbjct: 155 SIEQDASLQLVARMQ 169
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 218 NIQKESTLHLV 250
+I+++++L LV
Sbjct: 155 SIEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 214
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 215 YNIQKESTLHLVL 253
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSX 441
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 442 YNIQKESTLHLVL 480
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/90 (30%), Positives = 47/90 (52%)
Frame = +2
Query: 11 RQAYS*NKIIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 190
RQ + + + + V+ G ++ T+E+ K I +P +QQRLI+ G+ L
Sbjct: 8 RQPLTAEGVAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRIL 67
Query: 191 EDGRTLSDYNIQKESTLHLVLLFVEECRSS 280
+D +TL Y +Q + T+H+V FV S+
Sbjct: 68 KDDQTLLSYGLQADHTVHMVRGFVPSSPSA 97
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +1
Query: 250 TALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 429
TA + + V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +
Sbjct: 12 TAEGVAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQ 71
Query: 430 TLSXYNIQKESTLHLV 477
TL Y +Q + T+H+V
Sbjct: 72 TLLSYGLQADHTVHMV 87
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXY 444
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 445 NIQKESTLHLVLRLRGG 495
Q ++T++LVL LRGG
Sbjct: 67 --QPDATVNLVLSLRGG 81
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 218 NIQKESTLHLVL 253
Q ++T++LVL
Sbjct: 67 --QPDATVNLVL 76
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 280 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKE 459
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 460 STLHLV 477
T+H+V
Sbjct: 82 HTIHMV 87
Score = 50.4 bits (115), Expect = 8e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +2
Query: 53 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 232
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 233 STLHLV 250
T+H+V
Sbjct: 82 HTIHMV 87
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 212 DYNIQKESTLHLVL 253
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 438
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 439 XYNIQKESTLHLVL 480
+ + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 212 DYNIQKESTLHLVL 253
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 438
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 439 XYNIQKESTLHLVL 480
+ + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 50.4 bits (115), Expect = 8e-07
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 259 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTL 435
RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 436 SXYNIQKESTLHLV 477
+ N+Q S +HL+
Sbjct: 718 AAQNVQPNSLVHLI 731
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 217
M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 218 NIQKESTLHLV 250
N+Q S +HL+
Sbjct: 721 NVQPNSLVHLI 731
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 221 IQKESTLHL 247
I ES L L
Sbjct: 61 ILFESRLLL 69
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED Y
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 448 IQKESTLHL 474
I ES L L
Sbjct: 61 ILFESRLLL 69
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 448 IQKESTLHLVL 480
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 221 IQKESTLHLVL 253
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 212 DYNIQKESTLHLVL 253
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 438
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 439 XYNIQKESTLHLVL 480
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 212 DYNIQKESTLHLVL 253
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 438
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 439 XYNIQKESTLHLVL 480
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 212 DYNIQKESTLHLVL 253
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 438
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 439 XYNIQKESTLHLVL 480
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 211
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 212 DYNIQKESTLHLVL 253
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 438
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 439 XYNIQKESTLHLVL 480
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 214
+++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSD
Sbjct: 10 LIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSD 69
Query: 215 YNIQKESTLHLV 250
Y++++ TL+LV
Sbjct: 70 YHVEEGHTLYLV 81
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXY 444
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 445 NIQKESTLHLVLRLRGG 495
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 218 NIQKESTLHLVL 253
Q ++T++LVL
Sbjct: 67 --QSDTTMNLVL 76
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 48.0 bits (109), Expect = 4e-06
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 438
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 439 XYNIQKESTLHLVLRLRGG 495
Y I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 43.6 bits (98), Expect = 9e-05
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 211
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 212 DYNIQKESTLHL 247
DY I+ H+
Sbjct: 61 DYKIKACDIFHM 72
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.2 bits (107), Expect = 7e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 221 IQKESTL 241
I ES L
Sbjct: 61 ILFESLL 67
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED Y
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 448 IQKESTL 468
I ES L
Sbjct: 61 ILFESLL 67
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 53 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 227 KESTLHLVL 253
+S LHL++
Sbjct: 175 DDSVLHLLV 183
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 280 VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSXYNIQ 453
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 454 KESTLHLVLR 483
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 53 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 227 KESTLHLVL 253
+S LHL++
Sbjct: 175 DDSVLHLLV 183
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 280 VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSXYNIQ 453
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 454 KESTLHLVLR 483
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 221 IQKESTLHL 247
I + LHL
Sbjct: 61 ILQNPLLHL 69
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + ++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 448 IQKESTLHL 474
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 221 IQKESTLHLVLLFVEECRSS 280
I S + L + ++ R++
Sbjct: 61 ILNHSRIQLSISSPDQSRNN 80
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 448 IQKESTLHL 474
I S + L
Sbjct: 61 ILNHSRIQL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 220 HSKRIHTPSGTALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RL 396
HS R+ + M+I + L GK L V +++ ++KAK K + ++
Sbjct: 484 HSLRVFHSAPAIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKM 543
Query: 397 IFAGKQLEDGRTLSXYNIQKESTLHLV 477
+ GK+LED ++L+ N+Q S +HL+
Sbjct: 544 FYMGKELEDEKSLAEQNVQPNSLVHLL 570
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 217
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 218 NIQKESTLHLV 250
N+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTL 208
+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L+D R +
Sbjct: 108 LQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLI 166
Query: 209 SDYNIQKESTLHLVL 253
+D ++ +HL++
Sbjct: 167 TDLCQNGDNVIHLLI 181
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +1
Query: 274 IFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSXY 444
I V+T+ GK L VE S + VK +I KE GIP D + L G++L+D R ++
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 445 NIQKESTLHLVL 480
++ +HL++
Sbjct: 170 CQNGDNVIHLLI 181
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 212 DYNIQKESTLHLVL 253
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 68 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 247
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 248 V 250
+
Sbjct: 604 M 604
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +1
Query: 295 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHL 474
GK+I L V T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 475 V 477
+
Sbjct: 604 M 604
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +1
Query: 232 IHTPSGTALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 411
IH+ S ++ + + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K
Sbjct: 25 IHS-SSVSIDTMISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRK 83
Query: 412 QLEDGRTLSXYNIQKESTLHL 474
L+D + I+ S + L
Sbjct: 84 VLQDHLNMFGCQIRHNSRILL 104
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
++ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 35 MISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 94
Query: 218 NIQKESTLHL 247
I+ S + L
Sbjct: 95 QIRHNSRILL 104
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 9e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYN 447
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 448 IQKESTLHL 474
I+ S + L
Sbjct: 62 IRHNSRILL 70
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
++++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 1 MIKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 60
Query: 218 NIQKESTLHL 247
I+ S + L
Sbjct: 61 QIRHNSRILL 70
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 381
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 154
+M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 48 MMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVK 121
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVE-ASDTIE 339
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 423
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 408
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 181
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 268 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 408
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 181
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 295 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLH 471
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 472 LVLRLRGG 495
L LR RGG
Sbjct: 775 LSLRERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.7 bits (81), Expect = 0.010
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 310 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNI-QKESTLHL 474
L +EA+ T +K + G+ P QQRL+F GK+ ED L + K+ L L
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKEREDHEYLHMVGVGDKDKVLLL 138
Score = 34.3 bits (75), Expect = 0.056
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 83 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 36.3 bits (80), Expect = 0.014
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 262 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 432
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
Score = 34.7 bits (76), Expect = 0.042
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 44 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 205
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 35.1 bits (77), Expect = 0.032
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 274 IFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSXYN 447
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 448 IQKESTLHLVLR 483
S +HL+++
Sbjct: 173 KDGNSVIHLLVK 184
Score = 33.9 bits (74), Expect = 0.074
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 47 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 220
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 221 IQKESTLHLVL 253
S +HL++
Sbjct: 173 KDGNSVIHLLV 183
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.056
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 280 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 423
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 38 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
++ + V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 78 LISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.056
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 62 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 157
L+ K I +E++P D IE +K I+++ GIP D
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 310 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSXYNIQKESTL 468
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 83 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 241
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At2g01110.1 68415.m00019 thylakoid membrane formation protein /
cpTatC (APG2) identical to thylakoid membrane formation
protein (cpTatC) GI:15004994 from [Arabidopsis
thaliana]; contains Pfam profile PF00902: MttB family;
identical to cDNA apg2 for cpTatC GI:15004993
Length = 340
Score = 30.3 bits (65), Expect = 0.91
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 162 SVSSLLASSWK-TDAPCQTTTFKKNPHSIWYCSSWRNADLREN-SDRKDHHFG 314
S SS L ++ T + T ++ P+++ +C+SWR A LR + + R+ FG
Sbjct: 5 STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYSVTQRRSKGFG 57
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 30.3 bits (65), Expect = 0.91
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +2
Query: 8 DRQAYS*NKIIMQIFVKTLTG--KTITL-EVEPSD--TIENVKAKIQDKEGIPPDQQRLI 172
DR + + K + ++ + ++G KTI + E EP D T+E+ AK + EG + I
Sbjct: 77 DRNSVNNGKSVDDVWKEIVSGEQKTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKI 136
Query: 173 FAGKQLEDGRTLSDYNIQKESTLHLV 250
+ DG D+ +Q+ S+ +V
Sbjct: 137 PTERLNNDGSYTFDFPMQRHSSFQMV 162
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 13/67 (19%)
Frame = +1
Query: 325 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSXYNIQ------KEST 465
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL+ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 466 LHLVLRL 486
+H+VLRL
Sbjct: 88 MHIVLRL 94
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +2
Query: 98 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSD 214
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 177 LASSWKTDAPCQTTTFKKNPHSIWYCSSWR-NADLRENSDRKDHHF 311
L SW P T F+K+ H++ Y WR D ++ K + F
Sbjct: 1407 LEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQALKQNPF 1452
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 92 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 247
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 312 QSDGLSGQSFHEDLHSSTKSSTRWS 238
Q+ GL Q FH L S +KSST WS
Sbjct: 2763 QAQGLKKQ-FHGSLESKSKSSTLWS 2786
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 177 LASSWKTDAPCQTTTFKKNPHSIWYCSSWR-NADLRENSDRKDHHF 311
L SW P T F+K+ H++ Y WR D ++ K + F
Sbjct: 1455 LEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPF 1500
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 238 TPSGTALRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 417
T +G L G + V TG T E DTI K ++ G P + ++F+G
Sbjct: 309 TSTGMLLTGQVGYIV---TGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYP 364
Query: 418 EDG 426
DG
Sbjct: 365 ADG 367
>At3g05680.1 68416.m00634 expressed protein
Length = 2057
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 357 DLRLHILNCVRSFYFQSDGLSGQSFHEDLHSSTKSSTRWSVD 232
D+ + I N + SF F GLS H +L ++ S + SVD
Sbjct: 519 DIAMFIGNIILSFMFSRTGLSFLLHHPELTATIIQSLKGSVD 560
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,972,559
Number of Sequences: 28952
Number of extensions: 255409
Number of successful extensions: 1042
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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