Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060268.seq
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118911-1|AAM50771.1|  356|Drosophila melanogaster LD21610p pro...    29   7.3  
AE014134-1201|AAF52466.1|  356|Drosophila melanogaster CG9200-PA...    29   7.3  

>AY118911-1|AAM50771.1|  356|Drosophila melanogaster LD21610p
           protein.
          Length = 356

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 287 RVLSDGWSP*TLQRKCATHLEI*VLRAQYSYNGC 186
           R + DG+ P  L  KCA   E  V R Q+  N C
Sbjct: 290 REMEDGYEPDLLAAKCAECEEASVTRTQWRCNSC 323


>AE014134-1201|AAF52466.1|  356|Drosophila melanogaster CG9200-PA
           protein.
          Length = 356

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 287 RVLSDGWSP*TLQRKCATHLEI*VLRAQYSYNGC 186
           R + DG+ P  L  KCA   E  V R Q+  N C
Sbjct: 290 REMEDGYEPDLLAAKCAECEEASVTRTQWRCNSC 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,721,854
Number of Sequences: 53049
Number of extensions: 598131
Number of successful extensions: 920
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)