Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060267.seq
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione S-tran...    27   0.56 
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    24   3.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   9.1  

>AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione
           S-transferase E4 protein.
          Length = 225

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 365 LQSPVKSVESTAKIYNLAFSITSLQELMYEHL 270
           L  P +SVE TAK   L   I  +  L  EHL
Sbjct: 11  LSPPGRSVELTAKALGLELDIVPINLLAQEHL 42


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 365 LQSPVKSVESTAKIYNLAFSITSLQELMYEHLDP 264
           L  P ++VE TAK   L     ++  L  +HL P
Sbjct: 11  LSPPCRAVELTAKALGLELEQKTINLLTGDHLKP 44


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 454 HYWKRFVMKTA 486
           HYW RF   TA
Sbjct: 361 HYWNRFTQSTA 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,455
Number of Sequences: 2352
Number of extensions: 10224
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)