Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060267.seq
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014217-1|AAH14217.1| 357|Homo sapiens LCMT1 protein protein. 71 2e-12
BC001214-1|AAH01214.1| 334|Homo sapiens leucine carboxyl methyl... 71 2e-12
AL137283-1|CAB70677.1| 321|Homo sapiens hypothetical protein pr... 71 2e-12
AK223364-1|BAD97084.1| 357|Homo sapiens leucine carboxyl methyl... 71 2e-12
AK025884-1|BAB15270.1| 357|Homo sapiens protein ( Homo sapiens ... 71 2e-12
AF151826-1|AAD34063.1| 334|Homo sapiens CGI-68 protein protein. 71 2e-12
AF037601-1|AAF18267.1| 334|Homo sapiens leucine carboxyl methyl... 71 2e-12
DQ102852-1|AAY88744.1| 686|Homo sapiens leucine carboxyl methyl... 42 0.001
BC015949-1|AAH15949.1| 686|Homo sapiens leucine carboxyl methyl... 42 0.001
AB011119-1|BAA25473.2| 696|Homo sapiens KIAA0547 protein protein. 42 0.001
>BC014217-1|AAH14217.1| 357|Homo sapiens LCMT1 protein protein.
Length = 357
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +3
Query: 222 KSTRDQSGILRRVKGVEMFIHQFLERCDTKCQIINLGCGFDTLYWRLKDTTQAVGNFIEL 401
K+ G RV GV I FL + + CQI+NLG G DT +WRLKD + E+
Sbjct: 85 KAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEV 144
Query: 402 DFPAVTAKKAHIIK 443
DFP + +K H IK
Sbjct: 145 DFPMIVTRKLHSIK 158
Score = 49.6 bits (113), Expect = 7e-06
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 KRCAVELGYWKDDYIGYFAK-HVDRKAPEINRGYYAGSRG 267
+R AV +GYW D YI +F + +RKAPEINRGY+A G
Sbjct: 60 RRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 99
>BC001214-1|AAH01214.1| 334|Homo sapiens leucine carboxyl
methyltransferase 1 protein.
Length = 334
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +3
Query: 222 KSTRDQSGILRRVKGVEMFIHQFLERCDTKCQIINLGCGFDTLYWRLKDTTQAVGNFIEL 401
K+ G RV GV I FL + + CQI+NLG G DT +WRLKD + E+
Sbjct: 62 KAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEV 121
Query: 402 DFPAVTAKKAHIIK 443
DFP + +K H IK
Sbjct: 122 DFPMIVTRKLHSIK 135
Score = 54.4 bits (125), Expect = 3e-07
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 148 CKRCAVELGYWKDDYIGYFAK-HVDRKAPEINRGYYAGSRG 267
CKR AV +GYW D YI +F + +RKAPEINRGY+A G
Sbjct: 36 CKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 76
>AL137283-1|CAB70677.1| 321|Homo sapiens hypothetical protein
protein.
Length = 321
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +3
Query: 222 KSTRDQSGILRRVKGVEMFIHQFLERCDTKCQIINLGCGFDTLYWRLKDTTQAVGNFIEL 401
K+ G RV GV I FL + + CQI+NLG G DT +WRLKD + E+
Sbjct: 49 KAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEV 108
Query: 402 DFPAVTAKKAHIIK 443
DFP + +K H IK
Sbjct: 109 DFPMIVTRKLHSIK 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 148 CKRCAVELGYWKDDYIGYFAK-HVDRKAPEINRGYYAGSRG 267
CKR AV +GYW D YI +F + +RKAPEINRGY+A G
Sbjct: 23 CKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 63
>AK223364-1|BAD97084.1| 357|Homo sapiens leucine carboxyl
methyltransferase variant protein.
Length = 357
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +3
Query: 222 KSTRDQSGILRRVKGVEMFIHQFLERCDTKCQIINLGCGFDTLYWRLKDTTQAVGNFIEL 401
K+ G RV GV I FL + + CQI+NLG G DT +WRLKD + E+
Sbjct: 85 KAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEV 144
Query: 402 DFPAVTAKKAHIIK 443
DFP + +K H IK
Sbjct: 145 DFPMIVTRKLHSIK 158
Score = 50.0 bits (114), Expect = 6e-06
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 KRCAVELGYWKDDYIGYFAK-HVDRKAPEINRGYYAGSRG 267
+R AV +GYW D YI +F + +RKAPEINRGY+A G
Sbjct: 60 RRFAVSIGYWHDSYIQHFVRLSKERKAPEINRGYFARVHG 99
>AK025884-1|BAB15270.1| 357|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22231 fis, clone HRC01949. ).
Length = 357
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +3
Query: 222 KSTRDQSGILRRVKGVEMFIHQFLERCDTKCQIINLGCGFDTLYWRLKDTTQAVGNFIEL 401
K+ G RV GV I FL + + CQI+NLG G DT +WRLKD + E+
Sbjct: 85 KAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLPPSKYFEV 144
Query: 402 DFPAVTAKKAHIIK 443
DFP + +K H IK
Sbjct: 145 DFPMIVTRKLHSIK 158
Score = 49.6 bits (113), Expect = 7e-06
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 KRCAVELGYWKDDYIGYFAK-HVDRKAPEINRGYYAGSRG 267
+R AV +GYW D YI +F + +RKAPEINRGY+A G
Sbjct: 60 RRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 99
>AF151826-1|AAD34063.1| 334|Homo sapiens CGI-68 protein protein.
Length = 334
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +3
Query: 222 KSTRDQSGILRRVKGVEMFIHQFLERCDTKCQIINLGCGFDTLYWRLKDTTQAVGNFIEL 401
K+ G RV GV I FL + + CQI+NLG G DT +WRLKD + E+
Sbjct: 62 KAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEV 121
Query: 402 DFPAVTAKKAHIIK 443
DFP + +K H IK
Sbjct: 122 DFPMIVTRKLHSIK 135
Score = 54.4 bits (125), Expect = 3e-07
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 148 CKRCAVELGYWKDDYIGYFAK-HVDRKAPEINRGYYAGSRG 267
CKR AV +GYW D YI +F + +RKAPEINRGY+A G
Sbjct: 36 CKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 76
>AF037601-1|AAF18267.1| 334|Homo sapiens leucine carboxyl
methyltransferase protein.
Length = 334
Score = 71.3 bits (167), Expect = 2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +3
Query: 222 KSTRDQSGILRRVKGVEMFIHQFLERCDTKCQIINLGCGFDTLYWRLKDTTQAVGNFIEL 401
K+ G RV GV I FL + + CQI+NLG G DT +WRLKD + E+
Sbjct: 62 KAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEV 121
Query: 402 DFPAVTAKKAHIIK 443
DFP + +K H IK
Sbjct: 122 DFPMIVTRKLHSIK 135
Score = 54.4 bits (125), Expect = 3e-07
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 148 CKRCAVELGYWKDDYIGYFAK-HVDRKAPEINRGYYAGSRG 267
CKR AV +GYW D YI +F + +RKAPEINRGY+A G
Sbjct: 36 CKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 76
>DQ102852-1|AAY88744.1| 686|Homo sapiens leucine carboxyl
methyltransferase 2 protein.
Length = 686
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 243 GILRRVKGVEMFIHQFLERCDT-----KCQIINLGCGFDTLYWRLKDTTQAVGNFI-ELD 404
G R + V + FLE+ + QI++LG GFD+LY+RLK + + E+D
Sbjct: 55 GYYVRARAVRHCVRAFLEQIGAPQAALRAQILSLGAGFDSLYFRLKTAGRLARAAVWEVD 114
Query: 405 FPAVTAKKAHII 440
FP V +KA I
Sbjct: 115 FPDVARRKAERI 126
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 151 KRCAVELGYWKDDYIGYFAKHVDRKAPEINRGYYAGSRGSR 273
KR GY +D + R+AP I+RGYY +R R
Sbjct: 24 KRSLAARGYVQDPFAALLVPGAARRAPLIHRGYYVRARAVR 64
>BC015949-1|AAH15949.1| 686|Homo sapiens leucine carboxyl
methyltransferase 2 protein.
Length = 686
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 243 GILRRVKGVEMFIHQFLERCDT-----KCQIINLGCGFDTLYWRLKDTTQAVGNFI-ELD 404
G R + V + FLE+ + QI++LG GFD+LY+RLK + + E+D
Sbjct: 55 GYYVRARAVRHCVRAFLEQIGAPQAALRAQILSLGAGFDSLYFRLKTAGRLARAAVWEVD 114
Query: 405 FPAVTAKKAHII 440
FP V +KA I
Sbjct: 115 FPDVARRKAERI 126
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 151 KRCAVELGYWKDDYIGYFAKHVDRKAPEINRGYYAGSRGSR 273
KR GY +D + R+AP I+RGYY +R R
Sbjct: 24 KRSLAARGYVQDPFAALLVPGAARRAPLIHRGYYVRARAVR 64
>AB011119-1|BAA25473.2| 696|Homo sapiens KIAA0547 protein protein.
Length = 696
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 243 GILRRVKGVEMFIHQFLERCDT-----KCQIINLGCGFDTLYWRLKDTTQAVGNFI-ELD 404
G R + V + FLE+ + QI++LG GFD+LY+RLK + + E+D
Sbjct: 65 GYYVRARAVRHCVRAFLEQIGAPQAALRAQILSLGAGFDSLYFRLKTAGRLARAAVWEVD 124
Query: 405 FPAVTAKKAHII 440
FP V +KA I
Sbjct: 125 FPDVARRKAERI 136
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 151 KRCAVELGYWKDDYIGYFAKHVDRKAPEINRGYYAGSRGSR 273
KR GY +D + R+AP I+RGYY +R R
Sbjct: 34 KRSLAARGYVQDPFAALLVPGAARRAPLIHRGYYVRARAVR 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,904,126
Number of Sequences: 237096
Number of extensions: 1539285
Number of successful extensions: 5828
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5821
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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