Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060262.seq
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 29 0.033
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.10
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.18
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.18
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.18
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 2.2
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 22 3.8
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 3.8
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 3.8
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 5.0
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 5.0
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 21 5.0
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 5.0
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 6.6
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 21 8.7
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 28.7 bits (61), Expect = 0.033
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N +NGS ++ + M + P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 23.8 bits (49), Expect = 0.94
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 107 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
ES P ++ LTL + ++ E + A L + W D L WN E+
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEY 72
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 27.1 bits (57), Expect = 0.10
Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N +NGS ++ + + + P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDD 139
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 23.8 bits (49), Expect = 0.94
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 107 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
ES P ++ LTL + ++ E + A L + W D L WN E+
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEY 72
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 26.2 bits (55), Expect = 0.18
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N + GS ++ + M + P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 22.2 bits (45), Expect = 2.9
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 206 LQMNWIDKRLSWNAGEW 256
L + W D L WN E+
Sbjct: 56 LSLEWNDYNLKWNESEY 72
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 26.2 bits (55), Expect = 0.18
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N + GS ++ + M + P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 22.2 bits (45), Expect = 2.9
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 206 LQMNWIDKRLSWNAGEW 256
L + W D L WN E+
Sbjct: 56 LSLEWNDYNLKWNESEY 72
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 26.2 bits (55), Expect = 0.18
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N + GS ++ + M + P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 23.8 bits (49), Expect = 0.94
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 107 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
ES P ++ LTL + ++ E + A L + W D L WN E+
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEY 72
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 22.6 bits (46), Expect = 2.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 262 CSPFPCVPTQSFVDPIHLKICQYPHGGLGLT 170
CSP PC S VD I C +G G T
Sbjct: 110 CSPNPCRNNGSCVDRIADFECNCKNGWKGKT 140
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 21.8 bits (44), Expect = 3.8
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 274 PAKCCSPFPCV 242
P+ CC PF C+
Sbjct: 59 PSICCGPFGCL 69
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPND 447
N + SW + ++ + + M LDN ND
Sbjct: 280 NLAKSWPQLIEKWSRVEMALDNWKND 305
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.8 bits (44), Expect = 3.8
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -2
Query: 262 CSPFPCVPTQSFVDPIHLKICQYPHGGLG 176
C P PC + D ++ C P G LG
Sbjct: 226 CKPNPCQNGGTCHDLVNSFSCSCPSGTLG 254
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.4 bits (43), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 488 IVTKWIC*LTK 520
+VT WIC +TK
Sbjct: 364 VVTAWICAITK 374
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.4 bits (43), Expect = 5.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 507 QIHFVTIVHPRTELERASLHVVGXIV 430
Q FVT RTEL + + HV IV
Sbjct: 316 QEQFVTNSEVRTELFKLAQHVSANIV 341
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 21.4 bits (43), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 488 IVTKWIC*LTK 520
+VT WIC +TK
Sbjct: 89 VVTAWICAITK 99
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.4 bits (43), Expect = 5.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 507 QIHFVTIVHPRTELERASLHVVGXIV 430
Q FVT RTEL + + HV IV
Sbjct: 316 QEQFVTNSEVRTELFKLAQHVSANIV 341
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 171 RMLACLKCRVRLTTILESGGDSRS 100
R+ C++C ILE GD S
Sbjct: 509 RLFTCMECPNNYPWILEPTGDGFS 532
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 20.6 bits (41), Expect = 8.7
Identities = 10/42 (23%), Positives = 16/42 (38%)
Frame = +2
Query: 11 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVV 136
F TC I +CE + +D ++ R KI +
Sbjct: 188 FFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,786
Number of Sequences: 336
Number of extensions: 2117
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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