Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060262.seq
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 36 8e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 34 0.003
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 34 0.003
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 33 0.008
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 32 0.010
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 32 0.013
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 31 0.023
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 29 0.072
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 29 0.072
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 29 0.13
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 26 0.67
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 25 1.2
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 23 8.2
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 35.9 bits (79), Expect = 8e-04
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXS-NNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N NNG V W + S+ ++ P D+
Sbjct: 104 VPSDHIWRPDIVLYNNADGHYEVTLMTKATVYNNGMVIWQPPAVYKSSCSIDVEYFPYDV 163
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC K GS ++ ++DL
Sbjct: 164 QTCVLKLGSWTYDGFKVDL 182
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 34.3 bits (75), Expect = 0.003
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLI 513
NG V W+ + ++ + P D TC KFGS N D++ L +
Sbjct: 136 NGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 183
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 33.9 bits (74), Expect = 0.003
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N N G V W + + ++ P D
Sbjct: 100 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 159
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 160 QTCVMKFGSWTYDGFQVDL 178
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.008
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G V SE++ P +VL N G V W + M ++
Sbjct: 100 GVEMLYVPSEQIWLPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVE 159
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS +N +++L
Sbjct: 160 YFPYDEQTCLMKFGSWTYNGAQVEL 184
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 32.3 bits (70), Expect = 0.010
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 86 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 31.9 bits (69), Expect = 0.013
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G + V SE + P +VL N + G V W + + +
Sbjct: 106 GVTELYVPSEHIWLPDIVLYNNADGEYVVTTLTKAILHYTGKVIWTPPAIFKSSCEIDVR 165
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ +++DL
Sbjct: 166 YFPFDQQTCFMKFGSWTYDGNQIDL 190
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.023
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXS-NNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N + G V W + + ++ P D
Sbjct: 104 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 163
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 164 QTCVLKFGSWTYDGFKVDL 182
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 29.5 bits (63), Expect = 0.072
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N NNGS ++ + + + P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 160 QHCEMKFGSWTYDGNQLDLILN 181
Score = 23.8 bits (49), Expect = 3.6
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +2
Query: 74 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 238
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 239 WNAGEW 256
WN E+
Sbjct: 87 WNDSEY 92
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 29.5 bits (63), Expect = 0.072
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N NNGS ++ + + + P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 160 QHCEMKFGSWTYDGNQLDLILN 181
Score = 26.6 bits (56), Expect = 0.50
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 74 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 238
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 239 WNAGEW 256
WN E+
Sbjct: 87 WNDSEY 92
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 28.7 bits (61), Expect = 0.13
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN-GSVSWIKRLDIXTPISMQLD 432
G T V SE + P +VL N ++ G V W + + ++
Sbjct: 94 GVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVE 153
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ +DL
Sbjct: 154 YFPFDEQTCFMKFGSWTYDGYMVDL 178
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 26.2 bits (55), Expect = 0.67
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
+ RL +P V++ N NNGS ++ + + + P D
Sbjct: 83 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 142
Query: 451 XTCTFKFGSRMHNSDEMDL 507
C KFGS ++ ++DL
Sbjct: 143 QRCEMKFGSWTYDGFQLDL 161
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 25.4 bits (53), Expect = 1.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NNGS ++ + + + P D C KFGS ++ ++DL
Sbjct: 147 NNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDL 193
Score = 23.0 bits (47), Expect = 6.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 206 LQMNWIDKRLSWNAGEW 256
L++ W D L WN E+
Sbjct: 91 LKLEWNDMNLRWNTSEY 107
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 22.6 bits (46), Expect = 8.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 100 RSGVSPRLQNRSQPD 144
RS +SP L SQPD
Sbjct: 370 RSNLSPMLNEESQPD 384
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,211
Number of Sequences: 2352
Number of extensions: 9530
Number of successful extensions: 45
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -