Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060262.seq
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 34 0.13
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 34 0.13
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 34 0.13
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 34 0.13
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 34 0.13
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 34 0.13
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 34 0.13
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 34 0.13
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 33 0.23
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 33 0.23
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 32 0.54
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 32 0.54
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 32 0.54
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 32 0.54
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 31 0.95
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 31 1.3
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 31 1.3
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 31 1.3
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 31 1.3
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 29 2.9
BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p pro... 29 3.8
BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p pro... 29 3.8
BT004897-1|AAO47875.1| 856|Drosophila melanogaster LD13416p pro... 29 3.8
BT003253-1|AAO25010.1| 659|Drosophila melanogaster LD27491p pro... 29 3.8
AF323978-1|AAL55993.1| 973|Drosophila melanogaster split centra... 29 3.8
AF217285-1|AAF44063.1| 517|Drosophila melanogaster protein tyro... 29 3.8
AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA... 29 3.8
AE014296-93|AAN11442.1| 952|Drosophila melanogaster CG1228-PD, ... 29 3.8
AE014296-92|AAN11441.1| 952|Drosophila melanogaster CG1228-PC, ... 29 3.8
AE014296-91|AAF47380.2| 952|Drosophila melanogaster CG1228-PA, ... 29 3.8
AE014296-85|AAN11443.2| 856|Drosophila melanogaster CG1228-PB, ... 29 3.8
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,... 29 3.8
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 29 3.8
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 29 5.1
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 29 5.1
BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p pro... 28 6.7
AJ272160-1|CAB77446.1| 60|Drosophila melanogaster nicotinic ac... 28 6.7
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N N G V W + + ++ P D
Sbjct: 83 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 142
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 143 QTCVMKFGSWTYDGFQVDL 161
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N N G V W + + ++ P D
Sbjct: 102 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 161
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 162 QTCVMKFGSWTYDGFQVDL 180
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G + V SE + P +VL N + G V W + + +
Sbjct: 115 GVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVR 174
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ D++DL
Sbjct: 175 YFPFDQQTCFMKFGSWTYDGDQIDL 199
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G + V SE + P +VL N + G V W + + +
Sbjct: 115 GVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVR 174
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ D++DL
Sbjct: 175 YFPFDQQTCFMKFGSWTYDGDQIDL 199
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G + V SE + P +VL N + G V W + + +
Sbjct: 115 GVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVR 174
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ D++DL
Sbjct: 175 YFPFDQQTCFMKFGSWTYDGDQIDL 199
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N N G V W + + ++ P D
Sbjct: 102 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 161
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 162 QTCVMKFGSWTYDGFQVDL 180
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G + V SE + P +VL N + G V W + + +
Sbjct: 115 GVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVR 174
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ D++DL
Sbjct: 175 YFPFDQQTCFMKFGSWTYDGDQIDL 199
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G + V SE + P +VL N + G V W + + +
Sbjct: 115 GVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVR 174
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ D++DL
Sbjct: 175 YFPFDQQTCFMKFGSWTYDGDQIDL 199
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 44 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 211
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 212 MNWIDKRLSWNAGEWAAAL 268
+W+DKRL++ + AL
Sbjct: 162 QSWVDKRLAFEGAQDTLAL 180
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG V + RL I M L + P D+ C KFGS
Sbjct: 218 NGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGS 253
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 44 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 211
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 212 MNWIDKRLSWNAGEWAAAL 268
+W+DKRL++ + AL
Sbjct: 162 QSWVDKRLAFEGAQDTLAL 180
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG V + RL I M L + P D+ C KFGS
Sbjct: 218 NGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGS 253
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 373 GSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLI 513
G V W+ + ++ + P D TC KFGS N D++ L +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 184
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 373 GSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLI 513
G V W+ + ++ + P D TC KFGS N D++ L +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 184
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 373 GSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLI 513
G V W+ + ++ + P D TC KFGS N D++ L +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 184
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 373 GSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLI 513
G V W+ + ++ + P D TC KFGS N D++ L +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 184
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 31.1 bits (67), Expect = 0.95
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXS-NNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N + G V W + + ++ P D
Sbjct: 117 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 176
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 177 QTCVLKFGSWTYDGFKVDL 195
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G V SE + P +VL N G V W + M ++
Sbjct: 81 GVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVE 140
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C KFGS +N ++DL
Sbjct: 141 YFPYDEQICFMKFGSWTYNGAQVDL 165
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G V SE + P +VL N G V W + M ++
Sbjct: 100 GVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVE 159
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C KFGS +N ++DL
Sbjct: 160 YFPYDEQICFMKFGSWTYNGAQVDL 184
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G V SE + P +VL N G V W + M ++
Sbjct: 100 GVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVE 159
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C KFGS +N ++DL
Sbjct: 160 YFPYDEQICFMKFGSWTYNGAQVDL 184
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G V SE + P +VL N G V W + M ++
Sbjct: 100 GVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVE 159
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C KFGS +N ++DL
Sbjct: 160 YFPYDEQICFMKFGSWTYNGAQVDL 184
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN-GSVSWIKRLDIXTPISMQLD 432
G T V SE + P +VL N ++ G V W + + ++
Sbjct: 95 GVDTLHVPSEHIWHPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVE 154
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ +DL
Sbjct: 155 YFPFDEQTCFMKFGSWTYDGYMVDL 179
>BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p
protein.
Length = 612
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG + + RL I M+L N P D +C GS
Sbjct: 218 NGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGS 253
>BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p
protein.
Length = 416
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG + + RL I M+L N P D +C GS
Sbjct: 22 NGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGS 57
>BT004897-1|AAO47875.1| 856|Drosophila melanogaster LD13416p
protein.
Length = 856
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 407 LSLPVQVSKVVPHTPADRCTPRVC 430
>BT003253-1|AAO25010.1| 659|Drosophila melanogaster LD27491p
protein.
Length = 659
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 210 LSLPVQVSKVVPHTPADRCTPRVC 233
>AF323978-1|AAL55993.1| 973|Drosophila melanogaster split central
complex protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 525 LSLPVQVSKVVPHTPADRCTPRVC 548
>AF217285-1|AAF44063.1| 517|Drosophila melanogaster protein
tyrosine phosphatase Ptpmegprotein.
Length = 517
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 120 LSLPVQVSKVVPHTPADRCTPRVC 143
>AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA
protein.
Length = 572
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG + + RL I M+L N P D +C GS
Sbjct: 204 NGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGS 239
>AE014296-93|AAN11442.1| 952|Drosophila melanogaster CG1228-PD,
isoform D protein.
Length = 952
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 503 LSLPVQVSKVVPHTPADRCTPRVC 526
>AE014296-92|AAN11441.1| 952|Drosophila melanogaster CG1228-PC,
isoform C protein.
Length = 952
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 503 LSLPVQVSKVVPHTPADRCTPRVC 526
>AE014296-91|AAF47380.2| 952|Drosophila melanogaster CG1228-PA,
isoform A protein.
Length = 952
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 503 LSLPVQVSKVVPHTPADRCTPRVC 526
>AE014296-85|AAN11443.2| 856|Drosophila melanogaster CG1228-PB,
isoform B protein.
Length = 856
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 316 LAVPXQASXSVPRTPAKCCSPFPC 245
L++P Q S VP TPA C+P C
Sbjct: 407 LSLPVQVSKVVPHTPADRCTPRVC 430
>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
isoform A protein.
Length = 1379
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 35 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 184
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 35 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 184
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P V++ N +NGS ++ + M + P D
Sbjct: 106 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKMDITWFPFDD 165
Query: 451 XTCTFKFGSRMHNSDEMDLLID 516
C KFGS ++ +++DL+++
Sbjct: 166 QHCEMKFGSWTYDGNQLDLVLN 187
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN-GSVSWIKRLDIXTPISMQLD 432
G T V SE + P +VL N ++ G V W + + ++
Sbjct: 95 GVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVE 154
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ +DL
Sbjct: 155 YFPFDEQTCFMKFGSWTYDGYMVDL 179
>BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p
protein.
Length = 93
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 35 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 184
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-ERCKSVTLLPLPSNSGSISESSS 76
>AJ272160-1|CAB77446.1| 60|Drosophila melanogaster nicotinic
acetylcyoline receptorDalpha 4 subunit protein.
Length = 60
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NNG V W + S+ ++ P D+ TC K GS
Sbjct: 17 NNGLVIWQPPAVYKSSCSIDVEYFPYDVRTCILKLGS 53
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,542,965
Number of Sequences: 53049
Number of extensions: 479162
Number of successful extensions: 1043
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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