Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060262.seq
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 40 8e-04
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 40 8e-04
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 39 0.002
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 39 0.002
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 39 0.002
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 39 0.002
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.008
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 37 0.008
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 37 0.008
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 37 0.008
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 37 0.008
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 35 0.031
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 35 0.031
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 34 0.071
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 34 0.071
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 34 0.071
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.094
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.094
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.16
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.16
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 33 0.16
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.16
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 33 0.16
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.22
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.22
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 32 0.22
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 31 0.50
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 31 0.50
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 31 0.50
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 31 0.50
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 31 0.50
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 0.66
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 31 0.66
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 31 0.66
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 30 0.87
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 30 0.87
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 30 0.87
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 30 0.87
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 30 0.87
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical pr... 30 1.2
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 30 1.2
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 30 1.2
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 30 1.2
Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 29 1.5
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 1.5
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 29 1.5
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 29 2.0
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 29 2.0
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 2.7
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 2.7
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 2.7
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 28 3.5
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 28 3.5
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 28 3.5
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 28 3.5
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 28 3.5
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 4.7
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 27 6.2
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 27 6.2
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 27 6.2
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 27 6.2
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 27 8.1
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 17 LTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVR 193
+T +A +E +S S + LL +++ SPPD ++ ++ + L H I E ++
Sbjct: 55 VTVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQ 113
Query: 194 ILADLQMNWIDKRLSWNAGEWAAAL-GWCPRNA 289
+L + W D LSW E+ W P ++
Sbjct: 114 VLVYIVQQWTDASLSWKVEEFRGIKHTWLPEHS 146
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 40.3 bits (90), Expect = 8e-04
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 98 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA W
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAW 115
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 NGSVSWIK-RLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG+V WI RL + +P ++ L P D TC F S HNS+E++L
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVEL 189
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 NGSVSWIK-RLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG+V WI RL + +P ++ L P D TC F S HNS+E++L
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVEL 189
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 NGSVSWIK-RLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG+V WI RL + +P ++ L P D TC F S HNS+E++L
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVEL 189
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 NGSVSWIK-RLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG+V WI RL + +P ++ L P D TC F S HNS+E++L
Sbjct: 144 NGTV-WINHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVEL 189
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWN 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWN 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +2
Query: 77 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 235
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 236 SWNAGEW 256
SWNA ++
Sbjct: 110 SWNASDY 116
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWN 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWN 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWN 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWN 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 35.1 bits (77), Expect = 0.031
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+R+ P +VL N ++G V+W+ + + ++ P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 451 XTCTFKFGSRMHNSDEMDL 507
CT FGS +NS+E+ L
Sbjct: 197 QCCTLVFGSWTYNSEEVRL 215
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 35.1 bits (77), Expect = 0.031
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+R+ P +VL N ++G V+W+ + + ++ P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 451 XTCTFKFGSRMHNSDEMDL 507
CT FGS +NS+E+ L
Sbjct: 197 QCCTLVFGSWTYNSEEVRL 215
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 33.9 bits (74), Expect = 0.071
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +2
Query: 11 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRE 175
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 176 SESTVRILADLQMNWIDKRLSWNAGEW 256
+ L+M W DK+L+WN +W
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDW 97
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 33.9 bits (74), Expect = 0.071
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +2
Query: 35 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 214
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 215 NWIDKRLSWNAGEWAAALGW 274
+W D +SW+ +W L W
Sbjct: 114 SWNDTMVSWDKEQW--GLSW 131
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.9 bits (74), Expect = 0.071
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = +2
Query: 38 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 196
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 197 LADLQMNWIDKRLSWNAGEW 256
+ W D RLSW+ ++
Sbjct: 117 VISHTQRWYDGRLSWDPSKY 136
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.094
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 247
L +L+ ++E E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.094
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 74 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 238
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 239 W 241
W
Sbjct: 85 W 85
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
+ G+++W+ + + P D C FKFGS + D++ L
Sbjct: 130 HTGNINWMPPGIFKVSCKLDIYWFPFDEQVCYFKFGSWTYTRDKIQL 176
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 14 LLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRES 178
LL I+ E + D L+ Y+R + P+ + + L L L ++ E
Sbjct: 10 LLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEI 69
Query: 179 ESTVRILADLQMNWIDKRLSWN 244
+ + L+ WID++LSW+
Sbjct: 70 DQIMTCSVWLKQTWIDRKLSWD 91
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 14 LLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRES 178
LL I+ E + D L+ Y+R + P+ + + L L L ++ E
Sbjct: 10 LLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEI 69
Query: 179 ESTVRILADLQMNWIDKRLSWN 244
+ + L+ WID++LSW+
Sbjct: 70 DQIMTCSVWLKQTWIDRKLSWD 91
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 14 LLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRES 178
LL I+ E + D L+ Y+R + P+ + + L L L ++ E
Sbjct: 10 LLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEI 69
Query: 179 ESTVRILADLQMNWIDKRLSWN 244
+ + L+ WID++LSW+
Sbjct: 70 DQIMTCSVWLKQTWIDRKLSWD 91
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 113 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
PP +I + L++ ++ + E E L D + +W D RLSW+ ++
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDY 125
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG+V RL + P M L P D TC+ F S +N+DE+ +
Sbjct: 175 NGTVWTNYRLKLQGPCIMDLTKFPFDNVTCSLTFESFNYNTDEVKM 220
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.22
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 131 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 244
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.22
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 131 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 244
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 113 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
PP +++ + + + L+ ++ E E V L D W D+RL WN E+
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEY 97
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 50 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 223
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 224 DKRLSWNAGEW 256
D RL WN W
Sbjct: 93 DDRLMWNQDTW 103
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN-GSVSWIKRLDIXTPISMQLDNXPNDM 450
VS +++ P +VL N N+ G + W+ + + ++ P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 451 XTCTFKFGSRMHNSDEMDL 507
CT FGS +N +E+ L
Sbjct: 167 QVCTLVFGSWTYNENEIKL 185
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG+V R+ + P S+ L N P D+ C+ + S +N E+++
Sbjct: 162 NGTVMVNYRVRVKGPCSLDLSNFPLDLQKCSLIYESFNYNRQEVEM 207
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN-GSVSWIKRLDIXTPISMQLDNXPNDM 450
VS +++ P +VL N N+ G + W+ + + ++ P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 451 XTCTFKFGSRMHNSDEMDL 507
CT FGS +N +E+ L
Sbjct: 167 QVCTLVFGSWTYNENEIKL 185
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN-GSVSWIKRLDIXTPISMQLDNXPNDM 450
VS +++ P +VL N N+ G + W+ + + ++ P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 451 XTCTFKFGSRMHNSDEMDL 507
CT FGS +N +E+ L
Sbjct: 167 QVCTLVFGSWTYNENEIKL 185
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 31.1 bits (67), Expect = 0.50
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLD 432
G V S+ + P VVL N + NG+V W + + ++
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNADGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQIDVE 156
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C KFGS + E+DL
Sbjct: 157 FFPFDRQQCEMKFGSWTYGGLEVDL 181
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 31.1 bits (67), Expect = 0.50
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLD 432
G V S+ + P VVL N + NG+V W + + ++
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNADGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQIDVE 156
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C KFGS + E+DL
Sbjct: 157 FFPFDRQQCEMKFGSWTYGGLEVDL 181
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 373 GSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLL 510
G+V+WI I + ++ + P D CT KFGS ++ DL+
Sbjct: 135 GNVTWIPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDLI 180
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 140 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 244
L +L+ ++E V ++ +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 98 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 247
YD ++P + L L+ + E V ++ ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 30.7 bits (66), Expect = 0.66
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 206 LQMNWIDKRLSWNAGEWA 259
L +NW+D RLSWN W+
Sbjct: 165 LNINWMDPRLSWNESLWS 182
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 373 GSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLL 510
G+V+WI I + ++ + P D CT KFGS ++ DL+
Sbjct: 135 GNVTWIPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDLI 180
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 0.87
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +2
Query: 11 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRE 175
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 176 SESTVRILADLQMNWIDKRLSWNAGEW 256
+E T+ ++ + W D+ L WN ++
Sbjct: 70 AEETINFSSEFILQWKDEFLFWNKSDY 96
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 30.3 bits (65), Expect = 0.87
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +2
Query: 14 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 178
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 179 ESTVRILADLQMNWIDKRLSWNAGEW 256
V + A L W D L W+ E+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEY 91
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 30.3 bits (65), Expect = 0.87
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +2
Query: 14 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 178
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 179 ESTVRILADLQMNWIDKRLSWNAGEW 256
V + A L W D L W+ E+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEY 91
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 30.3 bits (65), Expect = 0.87
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +2
Query: 14 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 178
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 179 ESTVRILADLQMNWIDKRLSWNAGEW 256
V + A L W D L W+ E+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEY 91
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 30.3 bits (65), Expect = 0.87
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +2
Query: 14 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 178
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 179 ESTVRILADLQMNWIDKRLSWNAGEW 256
V + A L W D L W+ E+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEY 91
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXS-NNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V+ E++ P +VL N + G+V W+ + + ++ P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 451 XTCTFKFGSRMHNSDEMDL 507
C+ FGS +N DE+ L
Sbjct: 175 QLCSLTFGSWTYNRDEIKL 193
>Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEM 501
NGSV R+ P M L P D CT F S +N DE+
Sbjct: 170 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 213
>Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEM 501
NGSV R+ P M L P D CT F S +N DE+
Sbjct: 151 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 194
>Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEM 501
NGSV R+ P M L P D CT F S +N DE+
Sbjct: 170 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 213
>Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEM 501
NGSV R+ P M L P D CT F S +N DE+
Sbjct: 151 NGSVWSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEV 194
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXS-NNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V+ E++ P +VL N + G+V W+ + + ++ P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 451 XTCTFKFGSRMHNSDEMDL 507
C+ FGS +N DE+ L
Sbjct: 175 QLCSLTFGSWTYNRDEIKL 193
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXS-NNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V+ E++ P +VL N + G+V W+ + + ++ P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 451 XTCTFKFGSRMHNSDEMDL 507
C+ FGS +N DE+ L
Sbjct: 175 QLCSLTFGSWTYNRDEIKL 193
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLI 513
N G V+WI M + P D C KFGS ++ +DL I
Sbjct: 76 NTGEVNWIPPGIFRASCKMDITYFPFDDQVCYLKFGSWTYHGLALDLSI 124
>Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical
protein T27E9.9 protein.
Length = 408
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
+NGS+ R+ + P S L P D C + S HN+D++ +
Sbjct: 162 SNGSIWHNYRIKLTGPCSSTLRTFPIDQQRCMLFYESFTHNTDQVKM 208
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 NGSVSWIK-RLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG++ W+ R+ P M L N P D C+ F S +N+ +++L
Sbjct: 166 NGTI-WLNYRIRSEAPCQMNLRNFPLDSIRCSLVFESYSYNAADVEL 211
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 146 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWA 259
LH+ H + I++ + +++ W+D+RL WN ++
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYS 100
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
++ E + + + L +W+D RLSWN E+
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEF 74
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 364 SNNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLL 510
S G V+W + ++ ++ P D+ C KFGS + +++L+
Sbjct: 113 SFEGRVTWQPPVVYDAFCNIDIEWYPYDLQICELKFGSWTYGGSQLNLI 161
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 206 LQMNWIDKRLSWNAGEW 256
L+M W D RL W+ G W
Sbjct: 77 LEMQWFDYRLMWDPGRW 93
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDL 507
NG V W + S+ ++ P D TC KFG +N +D+
Sbjct: 134 NGLVVWKPPSIYKSFCSIDIEYFPYDTQTCWMKFGGWTYNGFLLDV 179
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 206 LQMNWIDKRLSWNAGEW 256
L+++W D+RL WN EW
Sbjct: 107 LKLSWKDRRLRWNPEEW 123
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 206 LQMNWIDKRLSWNAGEW 256
L+++W D+RL WN EW
Sbjct: 107 LKLSWKDRRLRWNPEEW 123
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/44 (22%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 128 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEY 96
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 140 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
L L+ + E + V ++ ++ W D RL+WN ++
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDY 116
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 284 SEDTSQVLQPIPLRSNSVVCRSNSFEDLPVSA 189
S+D+++ +QP PL SN V R S+ V A
Sbjct: 861 SQDSAETVQPTPLSSNLVSFRQKSYPSRKVCA 892
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 44 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 217
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 218 -WIDKRLSW 241
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 80 DSLLATYDRESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
Query: 257 A 259
+
Sbjct: 99 S 99
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLID 516
++G ++WI M + P D C KFGS ++ +DL +D
Sbjct: 144 SDGVINWIPPGIFKLSCKMDITLFPFDEQICFMKFGSWTYHGFALDLRLD 193
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLID 516
++G ++WI M + P D C KFGS ++ +DL +D
Sbjct: 144 SDGVINWIPPGIFKLSCKMDITLFPFDEQICFMKFGSWTYHGFALDLRLD 193
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG + + + +P +++DN P D+ C GS
Sbjct: 137 NGEIRTSRPAVVSSPCPLEIDNFPYDVQKCNISMGS 172
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 238
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 239 WNAGE 253
WN +
Sbjct: 104 WNPAD 108
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN--GSVSWIKRLDIXTPISMQLDNXPND 447
+ S+++ +P ++L N + G++ W + + + + P D
Sbjct: 76 IPSDKIWKPDIILYNNADAQYMKSVMSTDVIVDYLGNIHWPLSAIFTSSCPLDVKHYPFD 135
Query: 448 MXTCTFKFGSRMHNSDEMDLLI 513
TC K+ S ++ ++DLL+
Sbjct: 136 RQTCILKYASWAYDGTKIDLLL 157
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 134 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNA 247
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLD 432
G T V +++ P +VL N + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C+ FGS DE+ L
Sbjct: 157 FFPFDEQVCSLTFGSWTFRKDELQL 181
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 131 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW 256
V+N+T+ + N + E ++IL +W D L+W+ EW
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEW 104
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLD 432
G T V +++ P +VL N + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D C+ FGS DE+ L
Sbjct: 157 FFPFDEQVCSLTFGSWTFRKDELQL 181
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 131 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW 256
V+N+T+ + N + E ++IL +W D L+W+ EW
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEW 104
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 319 RLAVPXQASXSVPRTPAKCCSPFPCVPT 236
R+A+P +S S+ R P S P VPT
Sbjct: 372 RIAMPTTSSSSLARRPGSASSSVPRVPT 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,470,735
Number of Sequences: 27780
Number of extensions: 223760
Number of successful extensions: 693
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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