Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060262.seq
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 35 6e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 6e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 34 8e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 34 0.001
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 33 0.002
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.007
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 30 0.013
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 30 0.017
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.029
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.20
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.20
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.20
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.36
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.36
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 25 0.62
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 1.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 1.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 3.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 4.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.7
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 7.7
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 7.7
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.9 bits (79), Expect = 3e-04
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 47 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 211
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 212 MNWIDKRLSWNAGEW 256
+ W L+W + E+
Sbjct: 88 LMWEQSHLTWKSSEF 102
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 439 PNDMXTCTFKFGSRMHNSDEMDL 507
P D+ CT S H S+E+ L
Sbjct: 167 PYDILNCTIHIASWSHGSNEIKL 189
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.7 bits (76), Expect = 6e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 53 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 220
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 221 IDKRLSWNAGEWAAAL 268
+D+RL++ G+ AL
Sbjct: 62 VDRRLAFQGGKETLAL 77
Score = 29.9 bits (64), Expect = 0.017
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
+G V + RL I M L+N P D C +FGS
Sbjct: 115 DGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 34.7 bits (76), Expect = 6e-04
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 367 NNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLIDK 519
++GSVS + + + + P D C FGS +H+ +E+++ +DK
Sbjct: 153 SSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDK 203
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 34.3 bits (75), Expect = 8e-04
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEMDLLI 513
NG V W+ + ++ + P D TC KFGS N D++ L +
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 183
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 125 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 256
K+ VN L ++ N+ E ++ L+ W D +L W+ ++
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADY 95
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 33.9 bits (74), Expect = 0.001
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N N G V W + + ++ P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 161 QTCVMKFGSWTYDGFQVDL 179
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 32.7 bits (71), Expect = 0.002
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G V SE + P +VL N G VSW + + ++
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEINVE 163
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D +C KFGS +N ++DL
Sbjct: 164 YFPFDEQSCIMKFGSWTYNGAQVDL 188
Score = 24.6 bits (51), Expect = 0.62
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 74 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 238
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 239 WNAGEW 256
WN E+
Sbjct: 97 WNPEEY 102
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.007
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXS-NNGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N + G V W + + ++ P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC KFGS ++ ++DL
Sbjct: 165 QTCVLKFGSWTYDGFKVDL 183
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 30.3 bits (65), Expect = 0.013
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLD 432
G + V SE + P +VL N + G V W + + +
Sbjct: 91 GVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVR 150
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ ++DL
Sbjct: 151 YFPFDQQTCFMKFGSWTYDGIQIDL 175
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 29.9 bits (64), Expect = 0.017
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXXSN-NGSVSWIKRLDIXTPISMQLDNXPNDM 450
V S+ + RP +VL N +G V W + S+ ++ P D+
Sbjct: 105 VPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDV 164
Query: 451 XTCTFKFGSRMHNSDEMDL 507
TC K GS ++ ++DL
Sbjct: 165 QTCVLKLGSWTYDGFKVDL 183
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.029
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GCSTWLVSSERLXRPXVVLLNXXXXXXXXXXXXXXXSNN-GSVSWIKRLDIXTPISMQLD 432
G T V SE + P +VL N ++ G V W + + ++
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVE 150
Query: 433 NXPNDMXTCTFKFGSRMHNSDEMDL 507
P D TC KFGS ++ +DL
Sbjct: 151 YFPFDEQTCFMKFGSWTYDGYTVDL 175
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.20
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P +++ N ++NGS ++ + + + P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 451 XTCTFKFGSRMHNSDEMDLLI 513
C KFGS ++ +++DL++
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 164 NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
++ E + A L++ W+D L WN E+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEY 55
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.20
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +2
Query: 74 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 238
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 239 WNAGEW 256
WN E+
Sbjct: 118 WNESEY 123
Score = 26.2 bits (55), Expect = 0.20
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P +++ N ++NGS ++ + + + P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 451 XTCTFKFGSRMHNSDEMDLLI 513
C KFGS ++ +++DL++
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.20
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +2
Query: 74 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 238
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 239 WNAGEW 256
WN E+
Sbjct: 118 WNESEY 123
Score = 26.2 bits (55), Expect = 0.20
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
++ +L +P +++ N ++NGS ++ + + + P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 451 XTCTFKFGSRMHNSDEMDLLI 513
C KFGS ++ +++DL++
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 164 NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
++ E + A L++ W+D L WN E+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEY 55
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 164 NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
++ E + A L++ W+D L WN E+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEY 55
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 164 NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
++ E + A L++ W+D L WN E+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEY 55
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 164 NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
++ E + A L++ W+D L WN E+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEY 55
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 164 NIRESESTVRILADLQMNWIDKRLSWNAGEW 256
++ E + A L++ W+D L WN E+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEY 55
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.36
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 128 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWA 259
+V L+LH ++ E + + W D L WNA E+A
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFA 75
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.36
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 VSSERLXRPXVVLLNXXXXXXXXXXXXXXX-SNNGSVSWIKRLDIXTPISMQLDNXPNDM 450
+ RL +P V++ N NNG+ ++ + + + P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 451 XTCTFKFGSRMHNSDEMDL 507
C KFGS ++ ++DL
Sbjct: 160 QRCEMKFGSWTYDGFQLDL 178
Score = 23.4 bits (48), Expect = 1.4
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +2
Query: 8 RFLLTCAIASAAE--CENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-N 166
R+ L AIA AA + +++ LL TY+ E P ++ +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 167 IRESESTVRILADLQMNWIDKRLSWNAGEW 256
+ E + L++ W D + WN ++
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDY 92
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 24.6 bits (51), Expect = 0.62
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 1 RHEVSPHLCYS*CGR 45
RH + PH+C CG+
Sbjct: 34 RHVIKPHICRKICGK 48
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +1
Query: 376 SVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGSRMHNSDEM 501
++ ++ +L + +M P+D C + S H +DEM
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 1.4
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 220
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 221 IDKRLSW 241
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 3.3
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 53 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 220
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 221 IDKRLSW 241
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 4.4
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +1
Query: 364 SNNGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
S +GSV++ R M L P D CT + S
Sbjct: 144 SGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLGSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 290 KRSEDTSQVLQPIPLRSNSVVCRSNSFE 207
++SE+ ++ + + SNS+ RS SF+
Sbjct: 198 EKSENETKTCKKYAISSNSLRSRSRSFQ 225
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG+V+++ R + +L+ P D C+F S
Sbjct: 171 NGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG+V+++ R + +L+ P D C+F S
Sbjct: 171 NGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG+V+++ R + +L+ P D C+F S
Sbjct: 222 NGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 370 NGSVSWIKRLDIXTPISMQLDNXPNDMXTCTFKFGS 477
NG+V+++ R + +L+ P D C+F S
Sbjct: 171 NGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 212 MNWIDKRLSWNAGEWAAALGWCPRN 286
+N I+KRL ++ + L +CP N
Sbjct: 249 VNEIEKRLLFSHNDRLGFLTFCPTN 273
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 91 RNVRSGVSPRLQNRS 135
R R +SPR++NRS
Sbjct: 729 RQHRDSLSPRVENRS 743
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,982
Number of Sequences: 438
Number of extensions: 2590
Number of successful extensions: 47
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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