Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060260.seq
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2073|AAF49976.1| 1219|Drosophila melanogaster CG6938-PA... 30 2.4
X76210-1|CAA53803.1| 389|Drosophila melanogaster homeotic ultra... 29 5.5
X05723-1|CAA29194.1| 389|Drosophila melanogaster Ultrabithorax ... 29 5.5
U31961-13|AAA84410.1| 346|Drosophila melanogaster UBXIVA protein. 29 5.5
U31961-12|AAA84409.1| 363|Drosophila melanogaster UBXIIA protein. 29 5.5
U31961-11|AAA84408.1| 380|Drosophila melanogaster UBXIA protein. 29 5.5
U31961-10|AAA84411.1| 372|Drosophila melanogaster UBXIIB protein. 29 5.5
U31961-9|AAA84412.1| 389|Drosophila melanogaster UBXIB protein. 29 5.5
BT010241-1|AAQ23559.1| 380|Drosophila melanogaster RE43738p pro... 29 5.5
AE014297-2261|AAF55355.2| 389|Drosophila melanogaster CG10388-P... 29 5.5
AE014297-2260|AAN13719.1| 372|Drosophila melanogaster CG10388-P... 29 5.5
AE014297-2259|AAS65158.1| 355|Drosophila melanogaster CG10388-P... 29 5.5
AE014297-2258|AAN13718.1| 380|Drosophila melanogaster CG10388-P... 29 5.5
AE014297-2257|AAN13717.1| 363|Drosophila melanogaster CG10388-P... 29 5.5
AE014297-2256|AAF55356.1| 346|Drosophila melanogaster CG10388-P... 29 5.5
AY122067-1|AAM52579.1| 331|Drosophila melanogaster AT09608p pro... 29 7.3
AE013599-470|AAF59216.3| 331|Drosophila melanogaster CG30491-PA... 29 7.3
>AE014296-2073|AAF49976.1| 1219|Drosophila melanogaster CG6938-PA
protein.
Length = 1219
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 364 QAPDAGTPR-LCSSPARSSWLSRRRQTDRR 278
Q+PD T R + SSPA+S +SRR QT R
Sbjct: 72 QSPDPSTTRQVMSSPAKSERMSRRSQTKLR 101
>X76210-1|CAA53803.1| 389|Drosophila melanogaster homeotic
ultrabithorax protein protein.
Length = 389
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>X05723-1|CAA29194.1| 389|Drosophila melanogaster Ultrabithorax
gene product protein.
Length = 389
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>U31961-13|AAA84410.1| 346|Drosophila melanogaster UBXIVA protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>U31961-12|AAA84409.1| 363|Drosophila melanogaster UBXIIA protein.
Length = 363
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>U31961-11|AAA84408.1| 380|Drosophila melanogaster UBXIA protein.
Length = 380
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>U31961-10|AAA84411.1| 372|Drosophila melanogaster UBXIIB protein.
Length = 372
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>U31961-9|AAA84412.1| 389|Drosophila melanogaster UBXIB protein.
Length = 389
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>BT010241-1|AAQ23559.1| 380|Drosophila melanogaster RE43738p
protein.
Length = 380
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>AE014297-2261|AAF55355.2| 389|Drosophila melanogaster CG10388-PA,
isoform A protein.
Length = 389
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>AE014297-2260|AAN13719.1| 372|Drosophila melanogaster CG10388-PC,
isoform C protein.
Length = 372
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>AE014297-2259|AAS65158.1| 355|Drosophila melanogaster CG10388-PF,
isoform F protein.
Length = 355
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>AE014297-2258|AAN13718.1| 380|Drosophila melanogaster CG10388-PE,
isoform E protein.
Length = 380
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>AE014297-2257|AAN13717.1| 363|Drosophila melanogaster CG10388-PD,
isoform D protein.
Length = 363
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>AE014297-2256|AAF55356.1| 346|Drosophila melanogaster CG10388-PB,
isoform B protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 13 SATDNGRKRHTGELYIRNSRRTRDINGGSQRDTFFGEPGVDREYNTGGN 159
+A NG+ G + +R S T D G DT G P R + GGN
Sbjct: 138 AANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGN 186
>AY122067-1|AAM52579.1| 331|Drosophila melanogaster AT09608p
protein.
Length = 331
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 155 ETKNKYAYIKHCSTGKKK--RHFTA 223
ETKNKY Y + C ++ RHF A
Sbjct: 92 ETKNKYVYCRQCDLASQESIRHFVA 116
>AE013599-470|AAF59216.3| 331|Drosophila melanogaster CG30491-PA
protein.
Length = 331
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 155 ETKNKYAYIKHCSTGKKK--RHFTA 223
ETKNKY Y + C ++ RHF A
Sbjct: 92 ETKNKYVYCRQCDLASQESIRHFVA 116
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,517,483
Number of Sequences: 53049
Number of extensions: 528730
Number of successful extensions: 1388
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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