Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060259.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.4  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 221 SALEETNSTDANTESLDS 274
           S +E+ N TD+N  SLD+
Sbjct: 2   SYIEDANETDSNNTSLDA 19


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 186  PPQTAPPRPKKSTNNTDTTFSSEQ 115
            PP+   P P + T   DT  SS +
Sbjct: 1006 PPEPVTPAPPQVTTGVDTGASSTE 1029


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = +2

Query: 362 APSAPHSVLMDIRWEVAQPVPPNGAALWPSPVG 460
           AP  P +    +     +      AALWP P G
Sbjct: 37  APITPDTEATGLSLPACRLFCSEAAALWPKPTG 69


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 314 G*PKLLPQSAGHTENRGSPYSRQCC 240
           G PK+ PQS   ++   SPY R  C
Sbjct: 249 GRPKMTPQSLLPSQTGLSPYLRFGC 273


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = -3

Query: 413  GQPPSVYPSVQNAVQTALQS-----TAWSSSGCTQLH 318
            G+ P V PS +  ++ +  S     +AWS  GC  L+
Sbjct: 1488 GEKPIV-PSAEKFIEVSSNSITLHLSAWSDGGCPMLY 1523


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -3

Query: 281 HTENRGSPYSRQCCWFPPGQTVDLRGSSGCKSRHK 177
           H  +R +  SR+CC+       D+R S     + K
Sbjct: 603 HGPHRLAARSRRCCYHAVAPGTDIRQSIALSRKKK 637


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -3

Query: 281 HTENRGSPYSRQCCWFPPGQTVDLRGSSGCKSRHK 177
           H  +R +  SR+CC+       D+R S     + K
Sbjct: 495 HGPHRLAARSRRCCYHAVAPGTDIRQSIALSRKKK 529


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 591 TKNFIVSYLFTGNGVRIAVARGP 523
           TK+FI  +L +  G  +  +RGP
Sbjct: 99  TKSFIYHFLHSWLGTGLLTSRGP 121


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 443 WPSPVGSSTL 472
           WPSP+G+S L
Sbjct: 277 WPSPIGASHL 286


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 404 PSVYPSVQNAVQTALQSTAWSSS 336
           P V+P+  NA+ T   S    SS
Sbjct: 452 PEVFPNTNNAIMTPPASVQTESS 474


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 404 PSVYPSVQNAVQTALQSTAWSSS 336
           P V+P+  NA+ T   S    SS
Sbjct: 400 PEVFPNTNNAIMTPPASVQTESS 422


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 540 AVARGPAMPLAHWNVAPGLPTLRSVED 460
           AV   P MP+   NVA     LRS+ D
Sbjct: 114 AVMASPPMPITTDNVAAISGVLRSLLD 140


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 574 FIFIYWKWCSNRSCTR 527
           FI++YW+  SN + ++
Sbjct: 21  FIYLYWQQTSNLTTSK 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,337
Number of Sequences: 336
Number of extensions: 3984
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)