Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060259.seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34942| Best HMM Match : Ca_channel_B (HMM E-Value=2.09999e-41) 34 0.12
SB_22126| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.9) 32 0.38
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 32 0.38
SB_48371| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 30 1.5
SB_17162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 30 2.0
SB_58424| Best HMM Match : ADAM_spacer1 (HMM E-Value=8.5e-23) 29 2.7
SB_19285| Best HMM Match : Galactosyl_T (HMM E-Value=0.69) 29 2.7
SB_54335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_19937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_58802| Best HMM Match : Gag_spuma (HMM E-Value=2.7) 28 6.1
SB_58079| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_28324| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_1420| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12) 28 6.1
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 28 6.1
SB_35044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_54947| Best HMM Match : rve (HMM E-Value=2.3e-31) 28 8.1
SB_45323| Best HMM Match : rve (HMM E-Value=5.3e-31) 28 8.1
SB_41979| Best HMM Match : rve (HMM E-Value=1.3e-23) 28 8.1
SB_27890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_54251| Best HMM Match : rve (HMM E-Value=0.032) 28 8.1
SB_49099| Best HMM Match : rve (HMM E-Value=2e-08) 28 8.1
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 28 8.1
SB_27752| Best HMM Match : ASC (HMM E-Value=3.7e-07) 28 8.1
SB_5918| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_34942| Best HMM Match : Ca_channel_B (HMM E-Value=2.09999e-41)
Length = 536
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 61 DKRFYFYLSFSLY-EHKTELF*GKCSVRVVCTFLWSWRGGLWRDLHPDDPRRSTVCPGGN 237
D F S SL+ + +L + C L + WRDLHPDDP CP G
Sbjct: 263 DNAALFSSSLSLHLKEMFDLILDEAIFEDACAHLGEFLDQYWRDLHPDDP-EELPCPDGT 321
Query: 238 QQ 243
+
Sbjct: 322 SR 323
>SB_22126| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.9)
Length = 460
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 500 TLHQACQPSEVLRIRPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTAWSSSGCTQL 321
+LH+ PSE+ ++P +T ++Y S N++ LQ W + G TQL
Sbjct: 218 SLHRLQNPSEIEFLQPGGSTSSRAAATAVELQFALYESYYNSLAVVLQRRDWENPGVTQL 277
Query: 320 H 318
+
Sbjct: 278 N 278
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 379 FCTDGYTLGGCPACASQRSSPVAIAGRILNTSEGWQAWCNVPVRQGHGGAACNCDSN 549
FCT GYT C ++ +S G ++ +G++ +C + G GG C + N
Sbjct: 462 FCTPGYTGSHCEVNINECASSPCQYGTCIDLIDGYRCYC----KPGFGGTNCGLNLN 514
>SB_48371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 216 YSLPWRKPTALTRIR---RASILCVSCALWQQLRLSIM 320
Y W +P+ LT+I+ A+++C+ CA +QLR ++
Sbjct: 428 YVFVWIQPSTLTQIQTFENANVICMICACSEQLRYDVI 465
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = +1
Query: 382 CTDGYTLGGCPACASQRSSPVAIAGRILNTSEGWQAWCNVPVRQGHGGAACNCDSNT 552
CT + C S P AG +NT G+Q C HG CD NT
Sbjct: 424 CTSDWEGKTCQLSKDCHSQPCQNAGTCINTETGFQCRC------AHGWEGPTCDQNT 474
>SB_17162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -3
Query: 512 WRTGTLHQACQPSEVLRI-RPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTAWSSS 336
W T L +C P + L + RP RW + + S Y N++ LQ W ++
Sbjct: 100 WSTFILSNSCSPGDPLVLERPPP-----RWSSNSPYSESYY----NSLAVVLQRRDWENT 150
Query: 335 GCTQLH 318
G TQL+
Sbjct: 151 GVTQLN 156
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -2
Query: 465 EDPTGDGHRAAPLGGT-GWATSQRISISTECGADGAPVHG 349
E+P+ DG A +G T G+ S RI+ S+ GAD P +G
Sbjct: 1012 ENPS-DGGATAQIGMTSGYINSSRITASSSLGADYQPYYG 1050
>SB_58424| Best HMM Match : ADAM_spacer1 (HMM E-Value=8.5e-23)
Length = 487
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = -3
Query: 455 PAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTAWSSS-GCTQLHNG*PKLLPQSAGH 279
P++ T LLR PS + + +++T LQ + S C Q S GH
Sbjct: 273 PSLTTHLLRHSRITHVTPSFFVTCLTSMKTYLQVIGFQCSVRCGQGFQTRRVFCSGSRGH 332
Query: 278 TENRGSPYSRQCCWFPP 228
+ R P + C PP
Sbjct: 333 CDPRARPAKHRKCSMPP 349
>SB_19285| Best HMM Match : Galactosyl_T (HMM E-Value=0.69)
Length = 263
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +3
Query: 228 WRKPTALTRIR---RASILCVSCALWQQLRLSIM 320
W +P+ LT+I+ A+++C+ CA +QLR ++
Sbjct: 5 WIQPSTLTQIQTFENANVICMICACSEQLRYDVI 38
>SB_54335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 413 GQPPSVYPSVQNAVQTALQSTAWSSSGCTQLH 318
G PP + S N++ LQ W + G TQL+
Sbjct: 25 GNPPPRHESYYNSLAVVLQRRDWENPGVTQLN 56
>SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -3
Query: 539 QLHAAP-PCPWRTGTLHQACQPSEVLRI-RPAMATGLLRWEAQAGQPPSVYPSVQNAVQT 366
++H AP P L +C P + L + RP RW + + S Y N++
Sbjct: 22 KVHLAPDPMQHAIPALSNSCSPGDPLVLERPPP-----RWSSNSPYSESYY----NSLAV 72
Query: 365 ALQSTAWSSSGCTQLH 318
LQ W ++G TQL+
Sbjct: 73 VLQRRDWENTGVTQLN 88
>SB_19937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 401 SVYPSVQNAVQTALQSTAWSSSGCTQLH 318
++Y S N++ LQ AW ++G TQL+
Sbjct: 33 ALYESYYNSLAVVLQRRAWENTGVTQLN 60
>SB_58802| Best HMM Match : Gag_spuma (HMM E-Value=2.7)
Length = 810
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -3
Query: 305 KLLPQSAGHTENRGSPYSRQCCWFPPGQTVDLRGSSGCKSRHKPPRQDQRK 153
++ P+S T R S+Q C PG R C+ R +P Q+ RK
Sbjct: 468 EVCPKSVWFTPTRPMDISQQHCASAPGIRTPFRTPKSCR-RGRPVNQEARK 517
>SB_58079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 551 VFESQLHAAPPCPWRTGTLHQACQPSEVLRI-RPAMATGLLRWEAQAGQPPSVYPSVQNA 375
+F + H W GT + +C P + L + RP RW + + S Y N+
Sbjct: 61 LFSTLEHTEAEVHWGEGTSN-SCSPGDPLVLERPPP-----RWSSNSPYSESYY----NS 110
Query: 374 VQTALQSTAWSSSGCTQLH 318
+ LQ W + G TQL+
Sbjct: 111 LAVVLQRRDWENPGVTQLN 129
>SB_28324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 506 TGTLHQACQPSEVLRI-RPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTAWSSSGC 330
T TL +C P + L + RP RW + + S Y N++ LQ W + G
Sbjct: 5 TDTLSNSCSPGDPLVLERPPP-----RWSSNSPYSESYY----NSLAVVLQRRDWENPGV 55
Query: 329 TQLH 318
TQL+
Sbjct: 56 TQLN 59
>SB_1420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 521 PCPWR--TGTLHQACQPSEVLRI-RPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQST 351
P WR +G +C P + L + RP RW + + S Y N++ LQ
Sbjct: 4 PSDWRLHSGKASNSCSPGDPLVLERPPP-----RWSSNSPYSESYY----NSLAVVLQRR 54
Query: 350 AWSSSGCTQLH 318
W + G TQL+
Sbjct: 55 DWENPGVTQLN 65
>SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12)
Length = 630
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 495 APGLPTLRSVEDPTGDGHRAAPLGGTGWATSQRIS 391
AP LP+L+S E P+G T + +S++IS
Sbjct: 141 APSLPSLKSGESDNNSSMPLVPVGPTDFKSSKQIS 175
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 283 PALCGNSLGYPLCNCVHPEEDHAVDWSAVCT--AFCTDGYTLGGC 411
P+L G++ +P CNC + +AV CT C G+T C
Sbjct: 359 PSLWGHNCAHP-CNCTNGARCNAVTGQCACTDGCSCNAGWTGPEC 402
>SB_35044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -3
Query: 521 PCPWRTGTLHQA--CQPSEVLRIRPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTA 348
P WR G + A C+ + ++P +T ++Y S N++ LQ
Sbjct: 57 PSDWRRGPGNGATDCRKVGIEFLQPGGSTSSRAAATAVELQFALYESYYNSLAVVLQRRD 116
Query: 347 WSSSGCTQLH 318
W + G TQL+
Sbjct: 117 WENPGVTQLN 126
>SB_54947| Best HMM Match : rve (HMM E-Value=2.3e-31)
Length = 1283
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 160 WSWRGGLWRDLHPD 201
WSW GG W+ LH D
Sbjct: 940 WSWLGGPWKRLHID 953
>SB_45323| Best HMM Match : rve (HMM E-Value=5.3e-31)
Length = 577
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 160 WSWRGGLWRDLHPD 201
WSW GG W+ LH D
Sbjct: 252 WSWPGGPWKRLHID 265
>SB_41979| Best HMM Match : rve (HMM E-Value=1.3e-23)
Length = 395
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 160 WSWRGGLWRDLHPD 201
WSW GG W+ LH D
Sbjct: 175 WSWPGGPWKRLHID 188
>SB_27890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 147 NNTDTTFSSEQFCFMFIQAET*IEIKTFIALI*IIL 40
N T+ T ++ FC F Q+ + +KTFI ++ +++
Sbjct: 165 NQTEATNGTQSFCGPFYQSNSVYWLKTFIYIVTMVI 200
>SB_54251| Best HMM Match : rve (HMM E-Value=0.032)
Length = 710
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 160 WSWRGGLWRDLHPD 201
WSW GG W+ LH D
Sbjct: 277 WSWPGGPWKRLHID 290
>SB_49099| Best HMM Match : rve (HMM E-Value=2e-08)
Length = 553
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 160 WSWRGGLWRDLHPD 201
WSW GG W+ LH D
Sbjct: 355 WSWPGGPWKRLHID 368
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -3
Query: 524 PPCPWRTGTLHQACQPSEVLRI-RPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTA 348
PP P L +C P + L + RP RW + + S Y N++ LQ
Sbjct: 603 PPPPPPVHFLSNSCSPGDPLVLERPPP-----RWSSNSPYSESYY----NSLAVVLQRRD 653
Query: 347 WSSSGCTQLH 318
W + G TQL+
Sbjct: 654 WENPGVTQLN 663
>SB_27752| Best HMM Match : ASC (HMM E-Value=3.7e-07)
Length = 505
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -3
Query: 524 PPCPWRTGTLHQACQPSEVLRI-RPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTA 348
P WR +H P + L + RP RW + + S Y N++ LQ
Sbjct: 12 PFLQWRNKDIHGTAYPGDPLVLERPPP-----RWSSNSPYSESYY----NSLAVVLQRRD 62
Query: 347 WSSSGCTQLH 318
W + G TQL+
Sbjct: 63 WENPGVTQLN 72
>SB_5918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 518 CPWRTGT-LHQACQPSEVLRIRPAMATGLLRWEAQAGQPPSVYPSVQNAVQTALQSTAWS 342
CP+ TGT L + QP R A L++ ++Y S N++ LQ W
Sbjct: 17 CPFLTGTRLIEFLQPGGSTSSRAAATAVELQF--------ALYESYYNSLAVVLQRRDWE 68
Query: 341 SSGCTQLH 318
+ G TQL+
Sbjct: 69 NPGVTQLN 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,640,552
Number of Sequences: 59808
Number of extensions: 553188
Number of successful extensions: 3832
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3824
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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