Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060258.seq
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08545-1|CAA69849.1|  533|Homo sapiens complement 9 protein.           30   6.7  
X02176-1|CAA26117.1|  559|Homo sapiens protein ( Human mRNA frag...    30   6.7  
K02766-1|AAA51889.1|  557|Homo sapiens C9 protein.                     30   6.7  
BC020721-1|AAH20721.1|  559|Homo sapiens complement component 9 ...    30   6.7  
AL136123-2|CAH71578.1|  196|Homo sapiens chromosome 13 open read...    30   6.7  
AK092654-1|BAC03938.1|  354|Homo sapiens UBUNIT (EC 2.4.1.-).  p...    30   6.7  
AF334405-1|AAK38371.1|  196|Homo sapiens CLLL6 protein protein.        30   6.7  
AF055016-1|AAC09363.1|  217|Homo sapiens unknown protein.              30   6.7  
DQ220706-1|ABA60895.1|  274|Homo sapiens vanin 3 protein.              30   8.9  

>Y08545-1|CAA69849.1|  533|Homo sapiens complement 9 protein.
          Length = 533

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 247 QWPGCSCSIRQPWRWTSAAVGGQ--GTRWTNCIPERRS*KACEPKRIESDNTGH 402
           +W  C   +RQ +R  S  V GQ  G R T+ + +RR     EP     D+ G+
Sbjct: 24  EWSQCDPCLRQMFRSRSIEVFGQFNGKRCTDAVGDRRQCVPTEPCEDAEDDCGN 77


>X02176-1|CAA26117.1|  559|Homo sapiens protein ( Human mRNA
           fragment for complement component C9. ).
          Length = 559

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 247 QWPGCSCSIRQPWRWTSAAVGGQ--GTRWTNCIPERRS*KACEPKRIESDNTGH 402
           +W  C   +RQ +R  S  V GQ  G R T+ + +RR     EP     D+ G+
Sbjct: 50  EWSQCDPCLRQMFRSRSIEVFGQFNGKRCTDAVGDRRQCVPTEPCEDAEDDCGN 103


>K02766-1|AAA51889.1|  557|Homo sapiens C9 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 247 QWPGCSCSIRQPWRWTSAAVGGQ--GTRWTNCIPERRS*KACEPKRIESDNTGH 402
           +W  C   +RQ +R  S  V GQ  G R T+ + +RR     EP     D+ G+
Sbjct: 49  EWSQCDPCLRQMFRSRSIEVFGQFNGKRCTDAVGDRRQCVPTEPCEDAEDDCGN 102


>BC020721-1|AAH20721.1|  559|Homo sapiens complement component 9
           protein.
          Length = 559

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 247 QWPGCSCSIRQPWRWTSAAVGGQ--GTRWTNCIPERRS*KACEPKRIESDNTGH 402
           +W  C   +RQ +R  S  V GQ  G R T+ + +RR     EP     D+ G+
Sbjct: 50  EWSQCDPCLRQMFRSRSIEVFGQFNGKRCTDAVGDRRQCVPTEPCEDAEDDCGN 103


>AL136123-2|CAH71578.1|  196|Homo sapiens chromosome 13 open reading
           frame 1 protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 344 RDEVKKHVNLKELKAIILVTAHWEEDVVTISSGK 445
           RD    H+ LKE+ A+ L T H   DVV + +G+
Sbjct: 13  RDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGR 46


>AK092654-1|BAC03938.1|  354|Homo sapiens UBUNIT (EC 2.4.1.-).
           protein.
          Length = 354

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -1

Query: 369 FTCFLTSSLRNTVSPACSLSPNSGRGPPPWLT--NRAGATGP 250
           FT + TSS R+ VS   +    S   P  W T  +R GA GP
Sbjct: 203 FTAWKTSSARSAVSTPAAACECSRSSPTSWTTRSSRLGAAGP 244


>AF334405-1|AAK38371.1|  196|Homo sapiens CLLL6 protein protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 344 RDEVKKHVNLKELKAIILVTAHWEEDVVTISSGK 445
           RD    H+ LKE+ A+ L T H   DVV + +G+
Sbjct: 13  RDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGR 46


>AF055016-1|AAC09363.1|  217|Homo sapiens unknown protein.
          Length = 217

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 344 RDEVKKHVNLKELKAIILVTAHWEEDVVTISSGK 445
           RD    H+ LKE+ A+ L T H   DVV + +G+
Sbjct: 34  RDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGR 67


>DQ220706-1|ABA60895.1|  274|Homo sapiens vanin 3 protein.
          Length = 274

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 SIIAFNSFRFTCFLTSSLRNTVSPACSLSPNSGRGPPPW 280
           +++  + F+ T F T     T  P+  L P+   GP PW
Sbjct: 221 AVVVVDEFQLTAFSTPQHGTTRCPSSRLFPSIQHGPRPW 259


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,747,283
Number of Sequences: 237096
Number of extensions: 1861153
Number of successful extensions: 4259
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4259
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)