Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060257.seq
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein. 75 2e-13
BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine methyl... 75 2e-13
AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransfera... 75 2e-13
AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein. 75 2e-13
AK127941-1|BAC87201.1| 517|Homo sapiens protein ( Homo sapiens ... 31 2.9
BC041331-1|AAH41331.2| 1121|Homo sapiens ZNF335 protein protein. 30 6.7
BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase... 30 6.7
AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335... 30 6.7
AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor prot... 30 6.7
AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zip... 30 6.7
AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine ... 30 6.7
AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane hel... 30 6.7
AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein. 30 6.7
BC028626-1|AAH28626.1| 1029|Homo sapiens TNRC6B protein protein. 30 8.9
>CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein.
Length = 637
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/90 (35%), Positives = 55/90 (61%)
Frame = +1
Query: 259 QDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLA 438
+DW + IV KLSP+I DS +R+ E + +EL++ LG+PA ++ ++ ++ NLA
Sbjct: 76 RDWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLA 135
Query: 439 RILQTYYETSHHPSLIWACVPMLLVEHIEN 528
R+L + T HH S+ W VP++ E + +
Sbjct: 136 RVLTNHIHTGHHSSMFWMRVPLVAPEDLRD 165
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 253
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
>BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine
methyltransferase 5 protein.
Length = 637
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/90 (35%), Positives = 55/90 (61%)
Frame = +1
Query: 259 QDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLA 438
+DW + IV KLSP+I DS +R+ E + +EL++ LG+PA ++ ++ ++ NLA
Sbjct: 76 RDWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLA 135
Query: 439 RILQTYYETSHHPSLIWACVPMLLVEHIEN 528
R+L + T HH S+ W VP++ E + +
Sbjct: 136 RVLTNHIHTGHHSSMFWMRVPLVAPEDLRD 165
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 253
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
>AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransferase
protein.
Length = 637
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/90 (35%), Positives = 55/90 (61%)
Frame = +1
Query: 259 QDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLA 438
+DW + IV KLSP+I DS +R+ E + +EL++ LG+PA ++ ++ ++ NLA
Sbjct: 76 RDWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLA 135
Query: 439 RILQTYYETSHHPSLIWACVPMLLVEHIEN 528
R+L + T HH S+ W VP++ E + +
Sbjct: 136 RVLTNHIHTGHHSSMFWMRVPLVAPEDLRD 165
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 253
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
>AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein.
Length = 637
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/90 (35%), Positives = 55/90 (61%)
Frame = +1
Query: 259 QDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLA 438
+DW + IV KLSP+I DS +R+ E + +EL++ LG+PA ++ ++ ++ NLA
Sbjct: 76 RDWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLA 135
Query: 439 RILQTYYETSHHPSLIWACVPMLLVEHIEN 528
R+L + T HH S+ W VP++ E + +
Sbjct: 136 RVLTNHIHTGHHSSMFWMRVPLVAPEDLRD 165
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 253
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
>AK127941-1|BAC87201.1| 517|Homo sapiens protein ( Homo sapiens
cDNA FLJ46051 fis, clone SYNOV4000598. ).
Length = 517
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -1
Query: 670 WNGKNLADNSKNNTQH-----VYPQFQGAHGNLGPPVPGLIPK 557
W G NL + K+ Q Q G+LGPP+PGL PK
Sbjct: 240 WEGHNLGASGKSQRQKSAVAGTSLQEGSCRGHLGPPLPGLDPK 282
>BC041331-1|AAH41331.2| 1121|Homo sapiens ZNF335 protein protein.
Length = 1121
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 680 YFPVEWKESGRQLQKQHPTRLSPIPRR 600
Y P E + GRQL+ Q PT +P PRR
Sbjct: 102 YNPAEDEPRGRQLRLQRPTPSTPRPRR 128
>BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase
36, fused homolog (Drosophila) protein.
Length = 1315
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 367 SYCRGLGVPAIMISI--HGRESNNLARILQTYYET 465
S+CR G+P +++S+ H +ESN+L + Q++Y T
Sbjct: 494 SFCREAGLPGLLLSLLRHSQESNSLQQ--QSWYGT 526
>AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335
protein.
Length = 1342
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 680 YFPVEWKESGRQLQKQHPTRLSPIPRR 600
Y P E + GRQL+ Q PT +P PRR
Sbjct: 323 YNPAEDEPRGRQLRLQRPTPSTPRPRR 349
>AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor
protein.
Length = 217
Score = 30.3 bits (65), Expect = 6.7
Identities = 21/75 (28%), Positives = 30/75 (40%)
Frame = +2
Query: 5 TREVCKMFCDAVSL*KN*IKKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIH 184
+R++ FCD L + E+ + I +QT A+ SY FI +IH
Sbjct: 104 SRKINSFFCDIPPLLAISCSDTSLNELLL---FAICGFIQTATVLAITVSYGFIAGAVIH 160
Query: 185 PRFRRQSTNAGKNGG 229
R S A GG
Sbjct: 161 MRSVEGSRRAASTGG 175
>AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zipper
co-transducer NIF1 protein.
Length = 1342
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 680 YFPVEWKESGRQLQKQHPTRLSPIPRR 600
Y P E + GRQL+ Q PT +P PRR
Sbjct: 323 YNPAEDEPRGRQLRLQRPTPSTPRPRR 349
>AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine
kinase protein.
Length = 1315
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 367 SYCRGLGVPAIMISI--HGRESNNLARILQTYYET 465
S+CR G+P +++S+ H +ESN+L + Q++Y T
Sbjct: 494 SFCREAGLPGLLLSLLRHSQESNSLQQ--QSWYGT 526
>AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane helix
receptor protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.7
Identities = 21/75 (28%), Positives = 30/75 (40%)
Frame = +2
Query: 5 TREVCKMFCDAVSL*KN*IKKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIH 184
+R++ FCD L + E+ + I +QT A+ SY FI +IH
Sbjct: 175 SRKINSFFCDIPPLLAISCSDTSLNELLL---FAICGFIQTATVLAITVSYGFIAGAVIH 231
Query: 185 PRFRRQSTNAGKNGG 229
R S A GG
Sbjct: 232 MRSVEGSRRAASTGG 246
>AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein.
Length = 1311
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 367 SYCRGLGVPAIMISI--HGRESNNLARILQTYYET 465
S+CR G+P +++S+ H +ESN+L + Q++Y T
Sbjct: 511 SFCREAGLPGLLLSLLRHSQESNSLQQ--QSWYGT 543
>BC028626-1|AAH28626.1| 1029|Homo sapiens TNRC6B protein protein.
Length = 1029
Score = 29.9 bits (64), Expect = 8.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 654 WQTTPKTTPNTFIPNSKALMEIW 586
W TP PN PNSK++ + W
Sbjct: 228 WGNTPANAPNAMKPNSKSMQDGW 250
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,123,955
Number of Sequences: 237096
Number of extensions: 2400667
Number of successful extensions: 4918
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4913
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -