Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060257.seq
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical p...    29   4.1  
Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 25/79 (31%), Positives = 40/79 (50%)
 Frame = +1

Query: 265 WTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARI 444
           W S +V K+SP+I+ DS         E++L +ELSY   LG+  + I +    S   A I
Sbjct: 119 WESYVVGKISPWIDCDSSDPAFASLSEEHLLKELSYICYLGLQTMAIELTRISSPRTAAI 178

Query: 445 LQTYYETSHHPSLIWACVP 501
           L+ +  T +    +W  +P
Sbjct: 179 LKKWIWTRNSRFTVWVQLP 197


>Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.3 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 62  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 235
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.2 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 62  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 235
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.1 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 62  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 235
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical
           protein C37E2.2a protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = +1

Query: 127 MSHRSTSMQLFIYSFAHYSPTFS*AIHKCR*KWWFYAVRYGSIPQDWTSRIV 282
           + ++S  +Q  I  F H++  F   +  C   W  YA+    +  DW ++++
Sbjct: 59  LGYKSEKLQK-ISDFMHFTSIFPVGMITCGLFWGLYAINPALVMPDWIAKLI 109


>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 418 RESNNLARILQTYYETSHHPSLI 486
           R +NNL +  Q ++++ HHPSLI
Sbjct: 844 RPNNNLNQQQQHHHQSHHHPSLI 866


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical
           protein C27D8.3a protein.
          Length = 982

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 418 RESNNLARILQTYYETSHHPSLI 486
           R +NNL +  Q ++++ HHPSLI
Sbjct: 910 RPNNNLNQQQQHHHQSHHHPSLI 932


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,165,875
Number of Sequences: 27780
Number of extensions: 373969
Number of successful extensions: 990
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)