Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060256.seq
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   3.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.0  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   9.2  

>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 372 VKLWQAVIKKGDLNMKNLRTRLQLQINP*T 461
           VKLW +  K GD N K     + +   P T
Sbjct: 465 VKLWTSFAKNGDPNPKEKTPLINVTWKPVT 494


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 479 EDSKNRKKLKQMLK 520
           EDS+NR KL ++L+
Sbjct: 440 EDSQNRAKLSELLR 453


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 VKLWQAVIKKGDLNMK 419
           VKLW    K GD N K
Sbjct: 464 VKLWTNFAKNGDPNPK 479


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,311
Number of Sequences: 336
Number of extensions: 2445
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)