Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060255.seq
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 118 3e-27
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 106 1e-23
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 87 1e-17
08_01_0397 - 3509186-3510291,3510322-3512335 76 3e-14
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 74 9e-14
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 66 3e-11
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 66 3e-11
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 64 7e-11
06_03_1255 + 28780181-28781172,28782065-28782932 48 9e-06
02_01_0381 - 2764331-2764342,2768966-2769907 48 9e-06
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 46 2e-05
03_05_0865 - 28365430-28367640 43 2e-04
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 43 2e-04
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 42 3e-04
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 40 0.001
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 39 0.004
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 38 0.005
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 34 0.11
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 33 0.26
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 32 0.46
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 31 1.1
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 30 1.4
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 29 4.3
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 29 4.3
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 29 4.3
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 4.3
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 28 5.7
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 28 7.5
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 7.5
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 118 bits (285), Expect = 3e-27
Identities = 55/128 (42%), Positives = 76/128 (59%)
Frame = +3
Query: 249 PRWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 428
P+ D SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 429 YVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHINNXPAI 608
Y + G+ EPTPIQ+QGWP+A+ R + +AQ G K +VH+ P +
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTG-SGKTLSYLLPGLVHVGAQPRL 224
Query: 609 RRGDGPIL 632
+GDGPI+
Sbjct: 225 EQGDGPIV 232
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 106 bits (255), Expect = 1e-23
Identities = 53/133 (39%), Positives = 75/133 (56%)
Frame = +3
Query: 234 SEHASPRWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 413
++ A+ D L F KNFY P+V + EVE YR E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 414 ANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHIN 593
FP+YV + G+ EPTPIQ+QGWP+A+ R + +A+ G K AIVH+N
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETG-SGKTLAYLLPAIVHVN 154
Query: 594 NXPAIRRGDGPIL 632
P + GDGPI+
Sbjct: 155 AQPILAPGDGPIV 167
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/123 (34%), Positives = 67/123 (54%)
Frame = +3
Query: 261 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQX 440
++ +PFNK+FY+ P+V S EV +Y + + VSG +V PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHINNXPAIRRGD 620
+ GY++PT IQ Q PI +S R + +A+ G K IVHI + P + + +
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTG-SGKTAAFVLPMIVHIMDQPELEKEE 291
Query: 621 GPI 629
GPI
Sbjct: 292 GPI 294
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 75.8 bits (178), Expect = 3e-14
Identities = 41/122 (33%), Positives = 63/122 (51%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXG 443
+ QPF KNFY + K + EV YR E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 444 VKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHINNXPAIRRGDG 623
+K +G+++P IQAQ PI MS R + +A+ G K + H+ + PA+ GDG
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTG-SGKTLAFVLPMLRHVKDQPAVVPGDG 497
Query: 624 PI 629
PI
Sbjct: 498 PI 499
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 74.1 bits (174), Expect = 9e-14
Identities = 40/122 (32%), Positives = 62/122 (50%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXG 443
+ QPF KN Y + + EV YR N E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 444 VKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHINNXPAIRRGDG 623
+K +G+++P PIQAQ PI MS R + +A+ G K + H+ + P + GDG
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTG-SGKTLAFVLPMLRHVKDQPPVVPGDG 358
Query: 624 PI 629
PI
Sbjct: 359 PI 360
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +3
Query: 339 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI 518
E YR+ HE+TV G V PI FE FP + ++ G+ PTPIQAQ WPIA+ +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 519 *LAVAQXG 542
+A+A+ G
Sbjct: 190 VVAIAKTG 197
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = +3
Query: 339 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI 518
E YR HE+T+ G E P F+ FP + V+ G+ PTPIQAQ WPIA+ R
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 519 *LAVAQXG 542
+AVA+ G
Sbjct: 220 IVAVAKTG 227
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 64.5 bits (150), Expect = 7e-11
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 240 HASPRWDSVSLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEA 416
H + S++P ++ F P+ P++ + YR +HEVT G V P FE
Sbjct: 555 HNHGPFPEASMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEAT 609
Query: 417 NFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
FP + + G+ PTPIQAQ WP+A+ R +A+A+ G
Sbjct: 610 GFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTG 651
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 306 PTVLKRSPYE-VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQ 482
P L+R P + R + + V G +V P + F + P+ + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 483 AQGWPIAMSERI*LAVAQXG 542
QG P+A+S R + +A G
Sbjct: 201 VQGLPVALSGRDMIGIAFTG 220
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Frame = +3
Query: 237 EHASPRWDSVSLQPFNKN--FYDP------HPTVLKRSPY-EVEEYRNNHEVTVSGVEVH 389
EH S R +S++ K + DP P L+R P + +E R + V G +V
Sbjct: 119 EHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVP 178
Query: 390 NPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
P + F + P+ + ++ G +PTPIQ QG P+ +S R + +A G
Sbjct: 179 PPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTG 229
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/60 (41%), Positives = 32/60 (53%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
V VSG +V P FE A + V V GY+ PTP+Q PIA++ R +A AQ G
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
>03_05_0865 - 28365430-28367640
Length = 736
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +3
Query: 345 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*L 524
+R + ++ G +V P++ + E+ + V+ GYKEP+PIQ P+ + +R +
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 525 AVAQXG 542
+A+ G
Sbjct: 357 GIAETG 362
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 348 RNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSER 515
R ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +S R
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 516 I*LAVAQXG 542
A A G
Sbjct: 185 ECFACAPTG 193
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 333 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSE 512
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 513 RI*LAVAQXG 542
R L A G
Sbjct: 220 RSLLVSADTG 229
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
V SG +V P+ F E + D + ++ Y +PTP+Q PI+++ R +A AQ G
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
V SG +V P F E + D + ++ Y +PTP+Q PI+++ R +A AQ G
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
V SG EV P+ F E + + ++ Y PTP+Q PI+++ R +A AQ G
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
FE + V GV+ GY+ PTPIQ + P+ ++ A+A+ G
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTG 73
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSX 572
P+ F P V K G++ P+PIQA WP + R + +A G K
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATG-SGKTIAFGV 148
Query: 573 QAIVHI 590
A++H+
Sbjct: 149 PALMHV 154
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 453 MGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHI--NNXPAIRRGDG 623
MG++ PT IQAQ P+AMS + L A G + IVH+ P + R DG
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTG--KTLAYLAPIVHLLQMREPRVERTDG 98
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSER 515
F E N + + +GY++PTPIQA P+A++ R
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
P + E P+ V MG+KEPT IQA+ P A+ R + + Q G
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTG 88
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
FE+ + G+ G++ P+PIQ + PIA++ LA A+ G
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNG 194
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 453 MGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
MG+K PT IQA+ P A+ R + V Q G
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTG 30
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
FE+ + G+ G++ P+PIQ + PIA++ LA A+ G
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNG 171
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
FE+ + G+ G++ P+PIQ + PIA++ LA A+ G
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNG 181
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 444 VKTMGYKEPTPIQAQGWPIA 503
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 282 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 404
NK+ Y+ ++ R+P + E+Y NN ++ EV P+++
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLEF 177
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 324 SPYEVEEYRNNHEVTVSGVEVHN 392
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,294,834
Number of Sequences: 37544
Number of extensions: 246663
Number of successful extensions: 542
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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