Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060255.seq
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 76 2e-14
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 1e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 41 9e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.18
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.18
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.54
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 30 1.3
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 30 1.3
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 30 1.3
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 2.2
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 2.2
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 2.2
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 29 3.8
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 6.7
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYV 434
W + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P +
Sbjct: 82 WSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQI 141
Query: 435 QXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHINNXPAIRR 614
+ +++PT IQ+ WPIAMS R +++A+ G K A+VHI +R
Sbjct: 142 HE-LLYGKFQKPTVIQSISWPIAMSGRDIISIAKTG-SGKTLAFMLPALVHITKQAHRQR 199
Query: 615 GDGP 626
G+GP
Sbjct: 200 GEGP 203
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/122 (31%), Positives = 63/122 (51%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXG 443
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 444 VKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHINNXPAIRRGDG 623
++ Y++PTPIQA P A+S R L +A+ G K AIVHI + P ++ G+G
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTG-SGKTAAYLWPAIVHIMDQPDLKAGEG 338
Query: 624 PI 629
P+
Sbjct: 339 PV 340
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +3
Query: 345 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*L 524
+R + +++ G V P++ +EEA FPD V VK +GY EPTPIQ Q PI + R +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 525 AVAQXGVXAKRCPTSXQAIVHINNXPAIRR 614
VA+ G K +V I + P + R
Sbjct: 343 GVAETG-SGKTAAFLLPLLVWITSLPKMER 371
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQX 440
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHINNXPAIRRGD 620
+K Y +PT IQAQ P MS R + +A+ G K HI + P + GD
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTG-SGKTLAFLLPMFRHILDQPELEEGD 376
Query: 621 GPI 629
GPI
Sbjct: 377 GPI 379
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVA 533
N V VSG V I++F EA F V V GY +PTP+Q P ++ R ++ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 534 QXG 542
Q G
Sbjct: 184 QTG 186
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVA 533
N V VSG V I++F EA F V V GY +PTP+Q P ++ R ++ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 534 QXG 542
Q G
Sbjct: 168 QTG 170
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVA 533
N V VSG V I++F EA F V V GY +PTP+Q P ++ R ++ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 534 QXG 542
Q G
Sbjct: 165 QTG 167
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
V +G +V PI F + + ++++ +KT GY PTP+Q P R ++ AQ G
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 40.7 bits (91), Expect = 9e-04
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Frame = +3
Query: 270 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 428
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 429 YVQXG-VKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXGVXAKRCPTSXQAIVHIN 593
G ++ G+++P+PIQ+Q WP+ +S + + V+Q G K A++HI+
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTG-SGKTLAFLLPALLHID 147
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
P + F EAN + +Q V GY + TPIQ P+ +A AQ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTG 388
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
P + F EAN + +Q V GY + TPIQ P+ +A AQ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTG 388
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
P + F EAN + +Q V GY + TPIQ P+ +A AQ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTG 388
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
P + F +++ P ++ V+ GY TPIQ P+ + LA AQ G
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTG 345
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
P + F +++ P ++ V+ GY TPIQ P+ + LA AQ G
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTG 345
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 107 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLEVRTCVAQMGFCFTPTFQQ 286
+ETV+ LE N +RL+ A VA E LE + GK N + A F T +
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLNPKFLARLTASGRFMETGYANE 130
Query: 287 KL 292
K+
Sbjct: 131 KI 132
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
FE+ N + GY +PTPIQ P+A++ + A A G
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATG 195
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -2
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTXLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -2
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTXLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
F EAN + ++ V GY + TPIQ P+ +A AQ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTG 599
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
F EAN + ++ V GY + TPIQ P+ +A AQ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTG 599
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 405 FEEANFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSERI*LAVAQXG 542
F EAN + ++ V GY + TPIQ P+ +A AQ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTG 599
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 423 PDYVQXGVKTMGYKEPTPIQAQGWPIAMSER 515
P+ V ++ MG+ EPT IQ+ P A+ +R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -2
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTXLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDF 333
FR S+RP + +R+ F+ L +H+ I + +M +L IIS +
Sbjct: 223 FRKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QY 274
Query: 332 IW*SFENCRMWIIKVF 285
+W + C + I +F
Sbjct: 275 LWQLAQGCPVIIYLIF 290
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 235 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 134
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPI 398
+ + L+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 165 YSNALLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,359,931
Number of Sequences: 27780
Number of extensions: 227870
Number of successful extensions: 635
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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