Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060252.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   9.0  
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    23   9.0  

>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 383 CARMKVPRLVEISSGQMCSNDKPQKEDCSID 475
           C++   P    +  GQMC+  +  K+ C+ D
Sbjct: 322 CSKTFRPWSFALGPGQMCAGGERAKDTCAGD 352


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 353 VTLSLNVAKHCARMKVPRLVEISSGQMCSNDKPQKEDCSID 475
           V L++   K C+ +     + + S QMC+     K+ CS D
Sbjct: 270 VELTVVDVKDCSPVYQRNGISLDSTQMCAGGVRGKDTCSGD 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,377
Number of Sequences: 2352
Number of extensions: 15362
Number of successful extensions: 30
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)