Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060251.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   3.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   4.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.5  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 146 EIDSH*FTNEATAHNNGVW 90
           ++++H   NE T H +GVW
Sbjct: 187 DVENHIEGNEVTLHWHGVW 205


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 146 EIDSH*FTNEATAHNNGVW 90
           ++++H   NE T H +GVW
Sbjct: 187 DVENHIEGNEVTLHWHGVW 205


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 550 FQPKWSNPLMK*ARGADLQNFIARLKE 630
           F   W  P  +    AD+QN+   +KE
Sbjct: 141 FDLDWEYPGQRGGAAADIQNYATLIKE 167


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 157 VDPACESLARISRILRTRLRWMR*NFGW 240
           ++ +C  +  + RIL T +  +   FGW
Sbjct: 199 IETSCRYVGTLYRILTTMMEMVNDIFGW 226


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 419 RHANALRGKRSHTGPLRQTRPVHISTYRRSRCEVPRR 529
           RH  +   ++  TG   QTR       R SR E PRR
Sbjct: 209 RHNQSRSKRQPKTGREDQTRRNPYYRPRTSRTEPPRR 245


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 194 GFCVPVYVGCVKI 232
           GFC  +YVG V I
Sbjct: 81  GFCASIYVGTVWI 93


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 451 PYRAAAANTARSYQHV 498
           PYR    +TAR+Y  V
Sbjct: 239 PYRGIMLDTARNYMSV 254


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +2

Query: 383 VASIRSSTAYTTRHANALRGKRSHTGPLRQTRPVHISTYRRSRC 514
           +A   S +   TRH    R    HT     TR    +T   SRC
Sbjct: 259 LAGTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRC 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,891
Number of Sequences: 336
Number of extensions: 2642
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)