Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060251.seq
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033256-1|AAH33256.1|  319|Homo sapiens FAM83H protein protein.       31   5.1  
AK127960-1|BAC87207.1|  886|Homo sapiens protein ( Homo sapiens ...    31   5.1  
AK127541-1|BAC87026.1|  733|Homo sapiens protein ( Homo sapiens ...    30   6.7  
AB109390-1|BAF02295.1|  531|Homo sapiens Serase-1B protein.            30   6.7  

>BC033256-1|AAH33256.1|  319|Homo sapiens FAM83H protein protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = +3

Query: 369 LPKRPSRRSAPVPPIPRAMRMLYEASGAIPGRCGKHGPFISARTDGADARFPGEHRFSPI 548
           +P  P RRS+PVPP+P     L   +  I G   K GP     +   +    G  R   +
Sbjct: 56  VPPVPERRSSPVPPVPERRGSL---TLTISGESPKAGPAEEGPSGPMEVLRKGSLRLRQL 112

Query: 549 LS 554
           LS
Sbjct: 113 LS 114


>AK127960-1|BAC87207.1|  886|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46072 fis, clone TESTI1000459. ).
          Length = 886

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = +3

Query: 369 LPKRPSRRSAPVPPIPRAMRMLYEASGAIPGRCGKHGPFISARTDGADARFPGEHRFSPI 548
           +P  P RRS+PVPP+P     L   +  I G   K GP     +   +    G  R   +
Sbjct: 623 VPPVPERRSSPVPPVPERRGSL---TLTISGESPKAGPAEEGPSGPMEVLRKGSLRLRQL 679

Query: 549 LS 554
           LS
Sbjct: 680 LS 681


>AK127541-1|BAC87026.1|  733|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45634 fis, clone CHONS2002829, moderately
           similar to Homo sapiens adipocyte enhancer binding
           protein 1 (AEBP1). ).
          Length = 733

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 106 ITTECGNMTGAMCSACVLGWVTTH 35
           +  ECG + GA+    VLGW + H
Sbjct: 85  VARECGGLAGALSGGGVLGWASRH 108


>AB109390-1|BAF02295.1|  531|Homo sapiens Serase-1B protein.
          Length = 531

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +2

Query: 326 DACCCREAVIGVVGSAEETVA-----SIRSSTAYTTRHANALRGKRSHTGPLRQTRPVH 487
           DA CCR A IGVV ++   +      +  S+  +   H   LRG R  +   R+T   H
Sbjct: 22  DAACCRAATIGVVATSLVVLTLGVLLAFLSTQGFHVDHTAELRGIRWTSSLRRETSDYH 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,155,341
Number of Sequences: 237096
Number of extensions: 1750353
Number of successful extensions: 9182
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9182
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)