Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060250.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.5  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 120 RTGSGITRVCFNDKLKKFIVYINNC 46
           RTG+ I ++  N  +  F V + NC
Sbjct: 297 RTGANIKKLIVNTWISLFCVKVTNC 321


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 394 RVEVSADSWACAPRSRAPRFYGIQNIPGSTTGR 492
           R++ +   +AC      P  YG+ NI    TGR
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFNIRARRTGR 343


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 394 RVEVSADSWACAPRSRAPRFYGIQNIPGSTTGR 492
           R++ +   +AC      P  YG+ NI    TGR
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFNIRARRTGR 343


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 548 FLNNVVKQSV*GALYT*FLIFIVFKFXATYFLKVLKLIIGTN 673
           FL  +    V    Y  + IF+VF F  T+F   +  ++  N
Sbjct: 16  FLKALTVWHVENPTYRLYKIFVVFSFAVTFFSAWICALVNYN 57


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 145 KAQGXAQTYSGCPQRAGPCLRDGAVVK 225
           K+    + Y  C    G C  DGA +K
Sbjct: 38  KSDRLLKNYVNCLLEKGKCTPDGAELK 64


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 424 CAPRSRAPRFYGI 462
           C P   A RFYGI
Sbjct: 253 CRPTFSAARFYGI 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,491
Number of Sequences: 336
Number of extensions: 3492
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)