Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060250.seq
(686 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 1.7
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 25 2.2
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 25 2.2
AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskele... 25 2.2
AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative cytoskel... 25 2.2
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 25 2.2
U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein. 25 3.0
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 3.9
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 24 3.9
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 5.2
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 5.2
AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450 CY... 24 5.2
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 315 FFSSRVPAQHACTEETGRSSTPCTSNRH 232
F +++ +Q A + TG+ PC S+ H
Sbjct: 1074 FVKNKLTSQIASVQPTGKGVCPCISSEH 1101
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 25.0 bits (52), Expect = 2.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +2
Query: 473 PVVL----LVAFGITDALLTSLFDIL*HNFLNNVV 565
PVVL L + +TD + +LFD L H F + ++
Sbjct: 242 PVVLVGPSLKGYEVTDMMQKALFDFLKHRFESRII 276
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 387 ISSSRSECRQLGVCPAQ 437
ISSSR +C +G CP Q
Sbjct: 226 ISSSRKQCPAVGDCPDQ 242
>AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskeletal
regulator protein.
Length = 135
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -1
Query: 242 VIDTINLTTAPSRRHGP-ARCGH 177
V+++ NLTT PS H P C H
Sbjct: 112 VVNSYNLTTCPSWAHAPNGPCRH 134
>AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative
cytoskeletal regulator protein.
Length = 135
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -1
Query: 242 VIDTINLTTAPSRRHGP-ARCGH 177
V+++ NLTT PS H P C H
Sbjct: 112 VVNSYNLTTCPSWAHAPNGPCRH 134
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 25.0 bits (52), Expect = 2.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 407 VPTAGRVPRAAGHHGSTVSRT 469
+PT R P AAG+ GS VS+T
Sbjct: 29 IPTL-RAPMAAGNAGSVVSKT 48
>U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein.
Length = 278
Score = 24.6 bits (51), Expect = 3.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 472 GCSGYRRTVVPGC 434
G GYR T VPGC
Sbjct: 215 GVKGYRFTTVPGC 227
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.2 bits (50), Expect = 3.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 537 RMSNRDVSSASVIPKATSSTTGDVLDTVEPWCPAARGTRPAVGT 406
RM NRD SSAS K ++ DT P+ G+R G+
Sbjct: 379 RMMNRDSSSASQRDKDQDIDDFNIHDTTLARQPSVGGSRRRGGS 422
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 24.2 bits (50), Expect = 3.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 537 RMSNRDVSSASVIPKATSSTTGDVLDTVEPWCPAARGTRPAVGT 406
RM NRD SSAS K ++ DT P+ G+R G+
Sbjct: 380 RMMNRDSSSASQRDKDQDIDDFNIHDTTLARQPSVGGSRRRGGS 423
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 531 SNRDVSSASVIPKATSSTTGDVLD 460
S SSA P TSS TG V D
Sbjct: 279 SPSSASSAMTTPATTSSPTGSVYD 302
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 531 SNRDVSSASVIPKATSSTTGDVLD 460
S SSA P TSS TG V D
Sbjct: 279 SPSSASSAMTTPATTSSPTGSVYD 302
>AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450
CYPm3r5 protein.
Length = 519
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 179 HPEYVCAXPWAFSPPRMWGRAPVAALP 99
+PE P F+P RM R P A LP
Sbjct: 421 YPEPATYDPDRFTPERMARRDPCAYLP 447
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,524
Number of Sequences: 2352
Number of extensions: 14569
Number of successful extensions: 64
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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