Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060249.seq
         (678 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97770-1|CAA66371.1|  718|Drosophila melanogaster larval serum p...    29   4.4  
AY119005-1|AAM50865.1|  701|Drosophila melanogaster LP03332p pro...    29   4.4  
AE014296-2095|AAF49958.1|  701|Drosophila melanogaster CG6806-PA...    29   4.4  

>X97770-1|CAA66371.1|  718|Drosophila melanogaster larval serum
           protein 2 protein.
          Length = 718

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 425 GSVAIIKMRNPRMQRHPL*FYLSMTSDLPKDILMEHF 315
           GS  +IK R  R+   P  F L +TSD  +D +++ F
Sbjct: 490 GSSYVIKARQQRLNHKPFEFTLDVTSDKAQDAVVKVF 526


>AY119005-1|AAM50865.1|  701|Drosophila melanogaster LP03332p
           protein.
          Length = 701

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 425 GSVAIIKMRNPRMQRHPL*FYLSMTSDLPKDILMEHF 315
           GS  +IK R  R+   P  F L +TSD  +D +++ F
Sbjct: 490 GSSYVIKARQQRLNHKPFEFTLDVTSDKAQDAVVKVF 526


>AE014296-2095|AAF49958.1|  701|Drosophila melanogaster CG6806-PA
           protein.
          Length = 701

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 425 GSVAIIKMRNPRMQRHPL*FYLSMTSDLPKDILMEHF 315
           GS  +IK R  R+   P  F L +TSD  +D +++ F
Sbjct: 490 GSSYVIKARQQRLNHKPFEFTLDVTSDKAQDAVVKVF 526


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,230,144
Number of Sequences: 53049
Number of extensions: 521251
Number of successful extensions: 803
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)