Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060249.seq
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   4.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   8.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 127 NISSVLYKLFKYY*KSPKFNKNI 195
           NI+SVL+ L  YY   P+++ +I
Sbjct: 260 NIASVLHALQLYYPHVPEYSSSI 282


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 127 NISSVLYKLFKYY*KSPKFNKNI 195
           NI+SVL+ L  YY   P+++ +I
Sbjct: 275 NIASVLHALQLYYPHVPEYSSSI 297


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 361 K*NHKGCRCIRGL 399
           K N  GCRC++G+
Sbjct: 603 KVNVAGCRCVKGI 615


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +2

Query: 101 NYKFKQINETFQVFFTNYLNIIKKV 175
           NYK+   N   ++++ NY+  I+++
Sbjct: 328 NYKYNYNNYNKKLYYKNYIINIEQI 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,441
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)