Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060245.seq
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001918-1|AAH01918.1| 397|Homo sapiens acetyl-Coenzyme A acylt... 79 1e-14
D16294-1|BAA03800.1| 397|Homo sapiens mitochondrial 3-oxoacyl-C... 78 3e-14
D90228-1|BAA14278.1| 427|Homo sapiens mitochondrial acetoacetyl... 47 7e-05
D10511-1|BAA01387.1| 427|Homo sapiens mitochondrial acetoacetyl... 47 7e-05
BC010942-1|AAH10942.1| 162|Homo sapiens ACAT1 protein protein. 41 0.004
BC063853-1|AAH63853.1| 289|Homo sapiens ACAT1 protein protein. 41 0.005
X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA... 38 0.034
X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRN... 38 0.034
X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for ... 38 0.034
BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 38 0.034
BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 38 0.034
S70154-1|AAB30856.1| 397|Homo sapiens cytosolic acetoacetyl-coe... 37 0.059
BC000408-1|AAH00408.1| 397|Homo sapiens ACAT2 protein protein. 37 0.059
AL135914-6|CAI21850.1| 397|Homo sapiens acetyl-Coenzyme A acety... 37 0.059
AF356877-1|AAM00223.1| 397|Homo sapiens acetyl CoA transferase-... 37 0.059
AB208993-1|BAD92230.1| 404|Homo sapiens Acetyl-CoA acetyltransf... 37 0.059
X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase pr... 37 0.079
BC014474-1|AAH14474.1| 331|Homo sapiens ACAA1 protein protein. 36 0.10
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 3.9
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 3.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 3.9
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 3.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 3.9
>BC001918-1|AAH01918.1| 397|Homo sapiens acetyl-Coenzyme A
acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A
thiolas protein.
Length = 397
Score = 79.0 bits (186), Expect = 1e-14
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Frame = +3
Query: 96 ASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMSWAK-SS 272
A ++G+F+V AKRTPFG +GG+ ++ +AT+L A AL VSP VDS+
Sbjct: 2 ALLRGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQ 61
Query: 273 LHHKLTESTRHVTRR----SKLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHKISVA 440
RHV R + L +R S + ++V+ ++ ++ +
Sbjct: 62 SSSDAIYLARHVGLRVGIPKETPALTINRLCGS-GFQSIVNGCQEICVK----EAEVVLC 116
Query: 441 GGVENMSQAPFAVRNVRFGTALGPTTPSKTPFW 539
GG E+MSQAP+ VRNVRFGT LG + W
Sbjct: 117 GGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLW 149
Score = 77.8 bits (183), Expect = 3e-14
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 212 LEGGRSVPGSGRQHVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSI 391
L G+ P + ++G V+ SS +D IY RH L+ GIP+E P L INRLCGSGFQSI
Sbjct: 41 LSAGKVSPETVDSVIMGNVLQSS-SDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSI 99
Query: 392 VNSAQDILTGAQDLSSGGSREHVASALRGQKREVRHGS--GTNYAFEDTL 535
VN Q+I ++ G E ++ A R VR G+ G++ ED+L
Sbjct: 100 VNGCQEICVKEAEVVLCGGTESMSQA-PYCVRNVRFGTKLGSDIKLEDSL 148
>D16294-1|BAA03800.1| 397|Homo sapiens mitochondrial 3-oxoacyl-CoA
thiolase protein.
Length = 397
Score = 78.2 bits (184), Expect = 3e-14
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
Frame = +3
Query: 102 VKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMSWAK-SSLH 278
++G+F+V AKRTPFG +GG+ ++ +AT+L A AL VSP VDS+
Sbjct: 4 LRGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSS 63
Query: 279 HKLTESTRHVTRR----SKLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHKISVAGG 446
RHV R + L +R S + ++V+ ++ ++ + GG
Sbjct: 64 SDAIYLARHVGLRVGIPKETPALTINRLCGS-GFQSIVNGCQEICVK----EAEVVLCGG 118
Query: 447 VENMSQAPFAVRNVRFGTALGPTTPSKTPFW 539
E+MSQAP+ VRNVRFGT LG + W
Sbjct: 119 TESMSQAPYCVRNVRFGTKLGSDIKLEDSLW 149
Score = 77.8 bits (183), Expect = 3e-14
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 212 LEGGRSVPGSGRQHVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSI 391
L G+ P + ++G V+ SS +D IY RH L+ GIP+E P L INRLCGSGFQSI
Sbjct: 41 LSAGKVSPETVDSVIMGNVLQSS-SDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSI 99
Query: 392 VNSAQDILTGAQDLSSGGSREHVASALRGQKREVRHGS--GTNYAFEDTL 535
VN Q+I ++ G E ++ A R VR G+ G++ ED+L
Sbjct: 100 VNGCQEICVKEAEVVLCGGTESMSQA-PYCVRNVRFGTKLGSDIKLEDSL 148
>D90228-1|BAA14278.1| 427|Homo sapiens mitochondrial
acetoacetyl-CoA thiolase precursor protein.
Length = 427
Score = 46.8 bits (106), Expect = 7e-05
Identities = 33/117 (28%), Positives = 53/117 (45%)
Frame = +2
Query: 245 RQHVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGA 424
++ +G V+ + G R A L AG+P P IN++C SG ++I+ ++Q ++ G
Sbjct: 87 KEAYMGNVLQGGE--GQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGH 144
Query: 425 QDLSSGGSREHVASALRGQKREVRHGSGTNYAFEDTLLGPDSRTHTAGLPHWGXTAE 595
QD+ G E +++ R G ED L+ D T H G AE
Sbjct: 145 QDVMVAGGMESMSNVPYVMNRGSTPYGGVK--LED-LIVKDGLTDVYNKIHMGSCAE 198
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +3
Query: 87 IMSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMSWAK 266
+ ++K + IV A RTP G+F G AT+L +IA GA+++AG+ +V
Sbjct: 34 VSKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGN 93
Query: 267 SSLHHKLTESTRHVTRRSKLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHK-ISVAG 443
+ TR + L + C+ A A ++ H+ + VAG
Sbjct: 94 VLQGGEGQAPTRQAVLGAGLPI--STPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAG 151
Query: 444 GVENMSQAPFAV 479
G+E+MS P+ +
Sbjct: 152 GMESMSNVPYVM 163
>D10511-1|BAA01387.1| 427|Homo sapiens mitochondrial
acetoacetyl-CoA thiolase protein.
Length = 427
Score = 46.8 bits (106), Expect = 7e-05
Identities = 33/117 (28%), Positives = 53/117 (45%)
Frame = +2
Query: 245 RQHVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGA 424
++ +G V+ + G R A L AG+P P IN++C SG ++I+ ++Q ++ G
Sbjct: 87 KEAYMGNVLQGGE--GQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGH 144
Query: 425 QDLSSGGSREHVASALRGQKREVRHGSGTNYAFEDTLLGPDSRTHTAGLPHWGXTAE 595
QD+ G E +++ R G ED L+ D T H G AE
Sbjct: 145 QDVMVAGGMESMSNVPYVMNRGSTPYGGVK--LED-LIVKDGLTDVYNKIHMGSCAE 198
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +3
Query: 87 IMSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMSWAK 266
+ ++K + IV A RTP G+F G AT+L +IA GA+++AG+ +V
Sbjct: 34 VSKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGN 93
Query: 267 SSLHHKLTESTRHVTRRSKLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHK-ISVAG 443
+ TR + L + C+ A A ++ H+ + VAG
Sbjct: 94 VLQGGEGQAPTRQAVLGAGLPI--STPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAG 151
Query: 444 GVENMSQAPFAV 479
G+E+MS P+ +
Sbjct: 152 GMESMSNVPYVM 163
>BC010942-1|AAH10942.1| 162|Homo sapiens ACAT1 protein protein.
Length = 162
Score = 41.1 bits (92), Expect = 0.004
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 245 RQHVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGA 424
++ +G V+ + G R A L AG+P P IN++C SG ++I+ ++Q ++ G
Sbjct: 87 KEAYMGNVLQGGE--GQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGH 144
Query: 425 QDLSSGGSREHVASALR 475
Q GS + +R
Sbjct: 145 QIKQETGSLAKICCHVR 161
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 87 IMSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQV 245
+ ++K + IV A RTP G+F G AT+L +IA GA+++AG+ +V
Sbjct: 34 VSKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEV 86
>BC063853-1|AAH63853.1| 289|Homo sapiens ACAT1 protein protein.
Length = 289
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 87 IMSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQV 245
+ ++K + IV A RTP G+F G AT+L +IA GA+++AG+ +V
Sbjct: 34 VSKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEV 86
>X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA
thiolase protein.
Length = 424
Score = 37.9 bits (84), Expect = 0.034
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +2
Query: 257 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLS 436
VG V+ G R A + IP+ P+ +NR C SG Q++ + A I G+ D+
Sbjct: 88 VGNVLQPGA--GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIG 145
Query: 437 SGGSREHVASALRG 478
E ++ A RG
Sbjct: 146 MACGVESMSLADRG 159
>X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRNA
for 3-oxoacyl-CoA thiolase. ).
Length = 424
Score = 37.9 bits (84), Expect = 0.034
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +2
Query: 257 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLS 436
VG V+ G R A + IP+ P+ +NR C SG Q++ + A I G+ D+
Sbjct: 88 VGNVLQPGA--GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIG 145
Query: 437 SGGSREHVASALRG 478
E ++ A RG
Sbjct: 146 MACGVESMSLADRG 159
>X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for
3-oxoacyl-CoA peroxisomal thiolase. ).
Length = 424
Score = 37.9 bits (84), Expect = 0.034
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +2
Query: 257 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLS 436
VG V+ G R A + IP+ P+ +NR C SG Q++ + A I G+ D+
Sbjct: 88 VGNVLQPGA--GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIG 145
Query: 437 SGGSREHVASALRG 478
E ++ A RG
Sbjct: 146 MACGVESMSLADRG 159
>BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 37.9 bits (84), Expect = 0.034
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +2
Query: 257 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLS 436
VG V+ G R A + IP+ P+ +NR C SG Q++ + A I G+ D+
Sbjct: 88 VGNVLQPGA--GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIG 145
Query: 437 SGGSREHVASALRG 478
E ++ A RG
Sbjct: 146 MACGVESMSLADRG 159
>BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 37.9 bits (84), Expect = 0.034
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +2
Query: 257 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLS 436
VG V+ G R A + IP+ P+ +NR C SG Q++ + A I G+ D+
Sbjct: 88 VGNVLQPGA--GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIG 145
Query: 437 SGGSREHVASALRG 478
E ++ A RG
Sbjct: 146 MACGVESMSLADRG 159
>S70154-1|AAB30856.1| 397|Homo sapiens cytosolic
acetoacetyl-coenzyme A thiolase protein.
Length = 397
Score = 37.1 bits (82), Expect = 0.059
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 305 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASA 469
R A++ AGIP P +CGSG +++ + Q I G + G E+++ A
Sbjct: 71 RQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKA 125
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 90 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 254
M+A + IV A RT G+F G +L + LK A V+P V +
Sbjct: 1 MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEV 55
>BC000408-1|AAH00408.1| 397|Homo sapiens ACAT2 protein protein.
Length = 397
Score = 37.1 bits (82), Expect = 0.059
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 305 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASA 469
R A++ AGIP P +CGSG +++ + Q I G + G E+++ A
Sbjct: 71 RQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKA 125
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 90 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 254
M+A + IV A RT G+F G +L + LK A V+P V +
Sbjct: 1 MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEV 55
>AL135914-6|CAI21850.1| 397|Homo sapiens acetyl-Coenzyme A
acetyltransferase 2 (acetoacetyl Coenzyme A thiolase)
protein.
Length = 397
Score = 37.1 bits (82), Expect = 0.059
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 305 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASA 469
R A++ AGIP P +CGSG +++ + Q I G + G E+++ A
Sbjct: 71 RQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKA 125
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 90 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 254
M+A + IV A RT G+F G +L + LK A V+P V +
Sbjct: 1 MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEV 55
>AF356877-1|AAM00223.1| 397|Homo sapiens acetyl CoA
transferase-like protein protein.
Length = 397
Score = 37.1 bits (82), Expect = 0.059
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 305 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASA 469
R A++ AGIP P +CGSG +++ + Q I G + G E+++ A
Sbjct: 71 RQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKA 125
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 90 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 254
M+A + IV A RT G+F G +L + LK A V+P V +
Sbjct: 1 MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEV 55
>AB208993-1|BAD92230.1| 404|Homo sapiens Acetyl-CoA
acetyltransferase, cytosolic variant protein.
Length = 404
Score = 37.1 bits (82), Expect = 0.059
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 305 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASA 469
R A++ AGIP P +CGSG +++ + Q I G + G E+++ A
Sbjct: 78 RQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKA 132
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 90 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSM 254
M+A + IV A RT G+F G +L + LK A V+P V +
Sbjct: 8 MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEV 62
>X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase
protein.
Length = 326
Score = 36.7 bits (81), Expect = 0.079
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 305 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRG 478
R A + IP+ P+ +NR C SG Q++ + A I G+ D+ E ++ A RG
Sbjct: 4 RIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRG 61
>BC014474-1|AAH14474.1| 331|Homo sapiens ACAA1 protein protein.
Length = 331
Score = 36.3 bits (80), Expect = 0.10
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 VGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQD-- 430
VG V+ G R A + IP+ P+ +NR C SG Q++ + A I G+ D
Sbjct: 88 VGNVLQPGA--GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIG 145
Query: 431 LSSGGSREHVASALRGQKRE 490
++ G + E+VA G RE
Sbjct: 146 MACGITSENVAERF-GISRE 164
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 3.9
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = -2
Query: 602 KLLRRSXPNGGVPQYESESPAPEGCLRRRSWSQSRAEPHVSDREGRLRHVLYSPRY*DLV 423
+L RRS P+ S +P P RRS S S EP R R R SPR
Sbjct: 1702 RLSRRSRSASSSPETRSRTP-PR---HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTS 1757
Query: 422 RRSKCPERCSRSI 384
RR + P R +
Sbjct: 1758 RRGRSPSPKPRGL 1770
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.1 bits (67), Expect = 3.9
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = -2
Query: 602 KLLRRSXPNGGVPQYESESPAPEGCLRRRSWSQSRAEPHVSDREGRLRHVLYSPRY*DLV 423
+L RRS P+ S +P P RRS S S EP R R R SPR
Sbjct: 734 RLSRRSRSASSSPETRSRTP-PR---HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTS 789
Query: 422 RRSKCPERCSRSI 384
RR + P R +
Sbjct: 790 RRGRSPSPKPRGL 802
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.1 bits (67), Expect = 3.9
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = -2
Query: 602 KLLRRSXPNGGVPQYESESPAPEGCLRRRSWSQSRAEPHVSDREGRLRHVLYSPRY*DLV 423
+L RRS P+ S +P P RRS S S EP R R R SPR
Sbjct: 1702 RLSRRSRSASSSPETRSRTP-PR---HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTS 1757
Query: 422 RRSKCPERCSRSI 384
RR + P R +
Sbjct: 1758 RRGRSPSPKPRGL 1770
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.1 bits (67), Expect = 3.9
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = -2
Query: 602 KLLRRSXPNGGVPQYESESPAPEGCLRRRSWSQSRAEPHVSDREGRLRHVLYSPRY*DLV 423
+L RRS P+ S +P P RRS S S EP R R R SPR
Sbjct: 225 RLSRRSRSASSSPETRSRTP-PR---HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTS 280
Query: 422 RRSKCPERCSRSI 384
RR + P R +
Sbjct: 281 RRGRSPSPKPRGL 293
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 3.9
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = -2
Query: 602 KLLRRSXPNGGVPQYESESPAPEGCLRRRSWSQSRAEPHVSDREGRLRHVLYSPRY*DLV 423
+L RRS P+ S +P P RRS S S EP R R R SPR
Sbjct: 1750 RLSRRSRSASSSPETRSRTP-PR---HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTS 1805
Query: 422 RRSKCPERCSRSI 384
RR + P R +
Sbjct: 1806 RRGRSPSPKPRGL 1818
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,274,020
Number of Sequences: 237096
Number of extensions: 2637766
Number of successful extensions: 10893
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10890
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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